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The map label for this gene is mltD [H]

Identifier: 78065901

GI number: 78065901

Start: 1386397

End: 1387971

Strand: Direct

Name: mltD [H]

Synonym: Bcep18194_A4430

Alternate gene names: 78065901

Gene position: 1386397-1387971 (Clockwise)

Preceding gene: 78065900

Following gene: 78065902

Centisome position: 37.53

GC content: 66.79

Gene sequence:

>1575_bases
ATGCGACTTATATTGAGTGCGATGGTGGTTCTGCTGCTCGCCGCTTGTGCGAGCCAGGCCCCTGTCGCCAACAACGCCGC
CGATTCGCAGGCGACGTCCACCTACCTCCGTAAATCAGCCACCGCCAAAGAAACTGTCGACGTCGACAAGCAATCCGTCG
GCGACCTGACCAGTGCAGACTCCGATCTCTGGGGTCGCATCCGCCGCGGTTTCCAGATGCCCGACCTGCAGACCGACCTC
GTCGACATGCAGACCACGTGGTACACGCAGCGCCCGGATTACGTGCAGCGCATGACCGAGCGCTCGCAGAAGTACCTGTA
CCACATCGTCGAAGAGCTCGAGGCGCGTCACATGCCGACCGAGCTCGCGCTGCTGCCGTTCATCGAGTCCGCATACAACC
CGCAGGCACTGTCGGTCGCGAAGGCGGCCGGCATGTGGCAGTTCATGCCCGGCACGGGCCGCACGTACAACCTGAAGCGC
AACATGTGGCAGGACGAGCGTCGCGACGTGCTCGCGTCGACGAGCGCCGCGCTCGACTACCTGTCGCGCCTGCATGACAT
GTTCGGCGACTGGTATCTCGCGCTGGCCGCGTACAACTGGGGCGAGGGCAACGTGCAGCGCGCGATCGCGCGCAACCAGG
CGGCCGGCCTGCCGACCGACTACCTGAGCCTGCGGATGCCGAACGAGACGCGCAACTACGTGCCCAAGCTGCAGGCGGTG
AAGAACATCATCGCGAATCCGCAGCAGTACGGCCTCGCGCTGCCGGACATCCCGAACCACCCGTATTTCGTGACGGTCAC
GACGTCGCGCGACATCGACGTGGCGGTGGCCGCGAAGCTCGCGAACCTGTCGCTCGACGAATTCCGCTCGCTGAACCCGT
CGTTCTCGAAGCCGGTGATCCTCGGTGCGACCGAGCCGCAGATCCTGCTGCCGTTCGACAACGCGTCGGCGTTCGAGAAG
AACCTGAAGGCGTACAACGGCCAGCTCTCGACGTGGACCACCTACACGGTCAGCGAACGTGCGCGACCGGCCGCGATCGC
CGAGAAGATTGGCGTGGACGCCGATACGCTGATGTCGATCAACAAGATTCCGGCCGGCATGCGCCTGAAGCCGGGCTCGA
CGATCGTCGTGCCGCGCGGCGATGACGACGATGAGGACATCAGCGCCGACGTCGCCGAAAACGGCGCGCTCGCGATGGAA
CCCGATGTCCCCGACACGCGCAAGATGCTGATCCGCGTGCGCCGCAAGCAGTCGATGGCGGCGATCGCCGGCCGCTACGG
CGTGTCGGTCGGCCAGCTCAAGGCGTGGAACCGCACGCACCGCGATCTCGCGATGCCGGGCCAGGCGCTCGTGCTGCACG
TGCCGGTCGGCCGTTCGGTGCCGGCGGAACCCGGTCCGGAGCGGATCGCGACGTCGGCCGGCGGTGCGCACATCGAGCGC
GCGAGCCTGGCGGTGGGCGGCAAGTCGCATGGCGCGAAGCGCGGCGCGGCGAAGCCAGCAGCCAAATCGGCGAAGGCGGC
TCCCGCGAAAGCGGCGCCGGCCAAGGCCGCAGCGCACAAGGGCAAGAAGAAGTAA

Upstream 100 bases:

>100_bases
AATGTAGGATTTCGCTGAGTTTTCGGTGTTTTTATTGACGTGAAGCACGCACTTCCGTAGTATCGCCTGCAATTTCCAGC
CGTCGGAAGCAGAGATTTTC

Downstream 100 bases:

>100_bases
CGCAGTCGCGAGCGCATCGTGCGGCCGGCCCGGTTTGCGCGATTGCGGTATCATCCGACGAAATGCAAGGAAACGCCGTC
ACCGAGGTGACGGCGTTTTT

Product: lytic transglycosylase like protein

Products: 1,6-Anhydrobond In The Muramic Acid Residue [C]

Alternate protein names: Murein hydrolase D; Regulatory protein dniR [H]

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MRLILSAMVVLLLAACASQAPVANNAADSQATSTYLRKSATAKETVDVDKQSVGDLTSADSDLWGRIRRGFQMPDLQTDL
VDMQTTWYTQRPDYVQRMTERSQKYLYHIVEELEARHMPTELALLPFIESAYNPQALSVAKAAGMWQFMPGTGRTYNLKR
NMWQDERRDVLASTSAALDYLSRLHDMFGDWYLALAAYNWGEGNVQRAIARNQAAGLPTDYLSLRMPNETRNYVPKLQAV
KNIIANPQQYGLALPDIPNHPYFVTVTTSRDIDVAVAAKLANLSLDEFRSLNPSFSKPVILGATEPQILLPFDNASAFEK
NLKAYNGQLSTWTTYTVSERARPAAIAEKIGVDADTLMSINKIPAGMRLKPGSTIVVPRGDDDDEDISADVAENGALAME
PDVPDTRKMLIRVRRKQSMAAIAGRYGVSVGQLKAWNRTHRDLAMPGQALVLHVPVGRSVPAEPGPERIATSAGGAHIER
ASLAVGGKSHGAKRGAAKPAAKSAKAAPAKAAPAKAAAHKGKKK

Sequences:

>Translated_524_residues
MRLILSAMVVLLLAACASQAPVANNAADSQATSTYLRKSATAKETVDVDKQSVGDLTSADSDLWGRIRRGFQMPDLQTDL
VDMQTTWYTQRPDYVQRMTERSQKYLYHIVEELEARHMPTELALLPFIESAYNPQALSVAKAAGMWQFMPGTGRTYNLKR
NMWQDERRDVLASTSAALDYLSRLHDMFGDWYLALAAYNWGEGNVQRAIARNQAAGLPTDYLSLRMPNETRNYVPKLQAV
KNIIANPQQYGLALPDIPNHPYFVTVTTSRDIDVAVAAKLANLSLDEFRSLNPSFSKPVILGATEPQILLPFDNASAFEK
NLKAYNGQLSTWTTYTVSERARPAAIAEKIGVDADTLMSINKIPAGMRLKPGSTIVVPRGDDDDEDISADVAENGALAME
PDVPDTRKMLIRVRRKQSMAAIAGRYGVSVGQLKAWNRTHRDLAMPGQALVLHVPVGRSVPAEPGPERIATSAGGAHIER
ASLAVGGKSHGAKRGAAKPAAKSAKAAPAKAAPAKAAAHKGKKK
>Mature_524_residues
MRLILSAMVVLLLAACASQAPVANNAADSQATSTYLRKSATAKETVDVDKQSVGDLTSADSDLWGRIRRGFQMPDLQTDL
VDMQTTWYTQRPDYVQRMTERSQKYLYHIVEELEARHMPTELALLPFIESAYNPQALSVAKAAGMWQFMPGTGRTYNLKR
NMWQDERRDVLASTSAALDYLSRLHDMFGDWYLALAAYNWGEGNVQRAIARNQAAGLPTDYLSLRMPNETRNYVPKLQAV
KNIIANPQQYGLALPDIPNHPYFVTVTTSRDIDVAVAAKLANLSLDEFRSLNPSFSKPVILGATEPQILLPFDNASAFEK
NLKAYNGQLSTWTTYTVSERARPAAIAEKIGVDADTLMSINKIPAGMRLKPGSTIVVPRGDDDDEDISADVAENGALAME
PDVPDTRKMLIRVRRKQSMAAIAGRYGVSVGQLKAWNRTHRDLAMPGQALVLHVPVGRSVPAEPGPERIATSAGGAHIER
ASLAVGGKSHGAKRGAAKPAAKSAKAAPAKAAPAKAAAHKGKKK

Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1786405, Length=458, Percent_Identity=34.7161572052402, Blast_Score=240, Evalue=1e-64,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR010511
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01476 LysM; PF06474 MLTD_N; PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 57089; Mature: 57089

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00922 TRANSGLYCOSYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLILSAMVVLLLAACASQAPVANNAADSQATSTYLRKSATAKETVDVDKQSVGDLTSAD
CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCCC
SDLWGRIRRGFQMPDLQTDLVDMQTTWYTQRPDYVQRMTERSQKYLYHIVEELEARHMPT
HHHHHHHHCCCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ELALLPFIESAYNPQALSVAKAAGMWQFMPGTGRTYNLKRNMWQDERRDVLASTSAALDY
HHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHH
LSRLHDMFGDWYLALAAYNWGEGNVQRAIARNQAAGLPTDYLSLRMPNETRNYVPKLQAV
HHHHHHHHHHHEEHHEEECCCCCHHHHHHHHHHCCCCCCHHHEEECCCHHHHHHHHHHHH
KNIIANPQQYGLALPDIPNHPYFVTVTTSRDIDVAVAAKLANLSLDEFRSLNPSFSKPVI
HHHHCCHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCEE
LGATEPQILLPFDNASAFEKNLKAYNGQLSTWTTYTVSERARPAAIAEKIGVDADTLMSI
EECCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHH
NKIPAGMRLKPGSTIVVPRGDDDDEDISADVAENGALAMEPDVPDTRKMLIRVRRKQSMA
HCCCCCCEECCCCEEEEECCCCCCCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH
AIAGRYGVSVGQLKAWNRTHRDLAMPGQALVLHVPVGRSVPAEPGPERIATSAGGAHIER
HHHHHHCCCHHHEHHCCCCCHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCEEH
ASLAVGGKSHGAKRGAAKPAAKSAKAAPAKAAPAKAAAHKGKKK
HHEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MRLILSAMVVLLLAACASQAPVANNAADSQATSTYLRKSATAKETVDVDKQSVGDLTSAD
CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCCC
SDLWGRIRRGFQMPDLQTDLVDMQTTWYTQRPDYVQRMTERSQKYLYHIVEELEARHMPT
HHHHHHHHCCCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ELALLPFIESAYNPQALSVAKAAGMWQFMPGTGRTYNLKRNMWQDERRDVLASTSAALDY
HHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHH
LSRLHDMFGDWYLALAAYNWGEGNVQRAIARNQAAGLPTDYLSLRMPNETRNYVPKLQAV
HHHHHHHHHHHEEHHEEECCCCCHHHHHHHHHHCCCCCCHHHEEECCCHHHHHHHHHHHH
KNIIANPQQYGLALPDIPNHPYFVTVTTSRDIDVAVAAKLANLSLDEFRSLNPSFSKPVI
HHHHCCHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCEE
LGATEPQILLPFDNASAFEKNLKAYNGQLSTWTTYTVSERARPAAIAEKIGVDADTLMSI
EECCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHH
NKIPAGMRLKPGSTIVVPRGDDDDEDISADVAENGALAMEPDVPDTRKMLIRVRRKQSMA
HCCCCCCEECCCCEEEEECCCCCCCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH
AIAGRYGVSVGQLKAWNRTHRDLAMPGQALVLHVPVGRSVPAEPGPERIATSAGGAHIER
HHHHHHCCCHHHEHHCCCCCHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCEEH
ASLAVGGKSHGAKRGAAKPAAKSAKAAPAKAAPAKAAAHKGKKK
HHEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]