| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065872
Identifier: 78065872
GI number: 78065872
Start: 1362363
End: 1363490
Strand: Reverse
Name: 78065872
Synonym: Bcep18194_A4401
Alternate gene names: NA
Gene position: 1363490-1362363 (Counterclockwise)
Preceding gene: 78065873
Following gene: 78065870
Centisome position: 36.91
GC content: 70.12
Gene sequence:
>1128_bases ATGCACAACCGATTTCGCCTGTTTTCCGTTTCGTGCGCGCTCGCGGCCGCGACCGTGCTGGCGGCGTGCTCGTCGCCGCC CAAGCCGATCTACCAGCAGGAACAGTTCGACGCGACCAGCAGCCCGTATGCGCATACGTTCCACTCGAAATCCGACGCGG CCTGCGAGGCCGCGCGGCGCGCGCTGCTGAGCCAGGGCTATGTGGTGTCGTCGTCGCGCAACGATGCGGTCGACGGCAGC AAGAATTTCCAGCCGAACAACGACATGCACGTCGTGATCGAGTTTCACGTCGTGTGCGCGGACGCGAACGCCGATGGCTC GTCGAGCATTGCGTACGTTAACGCGGTGCAGGATCGCTACACGCTGAAGAAGTCGAATACGTCGGCCAGCGTGGGCTTGA GCGTGTTCGGCTCGCTGTCGCTGCCGATCGGGTCGAGTGACGATGCGCTCGTCAAGACCGCCAGCGAGACGATTCCCGCC GGCGTGTTCTATGAGCGCTTCTTCAATCTCGTCGAGCATTTCCTGAAGATCGACCCGGCCCGCCGCGACCGCGCGACCGT CAAGGCTGCCGAGAAGGAACCCGTCACGCCGCTGCCCGAACCCGCGCCGACACCCCAGGGCGAGCCGATGAAGATGACGA CGCCGGTCGTGCCGACGCCGCCCGCGGCGCCGGTGCCGCTGTCGCTGCCGGTCGTGGCGCCCGAGTCGGGCGCGAATGCC GTGCCGGCCGCCGCGTCGGCCGTGGTCGTGCCGGCGGCGATGCGTGCTGCCGCGCCGGTGGCGGCGTCTGGTTCGGGGTC GGTACCGGCTTCGGGTGCGGCGCCTGCATCGGCCGCCTCGTCGACGCCTGCACCGGCGTCCGGATCGGCATCCACGCCGG CTTCGGCTGCCGTGCCGGTTTCCGCGCCGGCATCCGCTTCCAGCCCGGCATCGTCAGCTGCCACGGCGGCGTCGACGCAT GCCGCTTCGGCGCCGGCCGCTGCGACGCTGGCTCCGGTCGCGCCTGCGTCCACCGCTTCGGCCCCCGTATCGGCATCGGC ACCGTCGAGCACCTCACCCACGCCTGCCGCCGCCAACCCCGTCGCATCGTCCGCACCGTCCGGCGCGAGCGCACCGGCCG CAAACTGA
Upstream 100 bases:
>100_bases AAGGAAACTATAATGACGCCCCGGCCTTACGAGATGGCCGCGCGCTTCATCCTGGCTCCGCCCGTTGCGCGACCTCTCGC CAAGCCTTCTGAAAGACGCC
Downstream 100 bases:
>100_bases CCGGCCGCCCGTATCGTCGCGCCCGGCCGTACCCGGCACCGCGCGACGATACGCACCCTTCCCCGTCATTCCTCACGGGA ATCTCCGCGCCACCGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein Transmembrane; Lipoprotein Protein; Large Tegument Domain-Containing Protein
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MHNRFRLFSVSCALAAATVLAACSSPPKPIYQQEQFDATSSPYAHTFHSKSDAACEAARRALLSQGYVVSSSRNDAVDGS KNFQPNNDMHVVIEFHVVCADANADGSSSIAYVNAVQDRYTLKKSNTSASVGLSVFGSLSLPIGSSDDALVKTASETIPA GVFYERFFNLVEHFLKIDPARRDRATVKAAEKEPVTPLPEPAPTPQGEPMKMTTPVVPTPPAAPVPLSLPVVAPESGANA VPAAASAVVVPAAMRAAAPVAASGSGSVPASGAAPASAASSTPAPASGSASTPASAAVPVSAPASASSPASSAATAASTH AASAPAAATLAPVAPASTASAPVSASAPSSTSPTPAAANPVASSAPSGASAPAAN
Sequences:
>Translated_375_residues MHNRFRLFSVSCALAAATVLAACSSPPKPIYQQEQFDATSSPYAHTFHSKSDAACEAARRALLSQGYVVSSSRNDAVDGS KNFQPNNDMHVVIEFHVVCADANADGSSSIAYVNAVQDRYTLKKSNTSASVGLSVFGSLSLPIGSSDDALVKTASETIPA GVFYERFFNLVEHFLKIDPARRDRATVKAAEKEPVTPLPEPAPTPQGEPMKMTTPVVPTPPAAPVPLSLPVVAPESGANA VPAAASAVVVPAAMRAAAPVAASGSGSVPASGAAPASAASSTPAPASGSASTPASAAVPVSAPASASSPASSAATAASTH AASAPAAATLAPVAPASTASAPVSASAPSSTSPTPAAANPVASSAPSGASAPAAN >Mature_375_residues MHNRFRLFSVSCALAAATVLAACSSPPKPIYQQEQFDATSSPYAHTFHSKSDAACEAARRALLSQGYVVSSSRNDAVDGS KNFQPNNDMHVVIEFHVVCADANADGSSSIAYVNAVQDRYTLKKSNTSASVGLSVFGSLSLPIGSSDDALVKTASETIPA GVFYERFFNLVEHFLKIDPARRDRATVKAAEKEPVTPLPEPAPTPQGEPMKMTTPVVPTPPAAPVPLSLPVVAPESGANA VPAAASAVVVPAAMRAAAPVAASGSGSVPASGAAPASAASSTPAPASGSASTPASAAVPVSAPASASSPASSAATAASTH AASAPAAATLAPVAPASTASAPVSASAPSSTSPTPAAANPVASSAPSGASAPAAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36930; Mature: 36930
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNRFRLFSVSCALAAATVLAACSSPPKPIYQQEQFDATSSPYAHTFHSKSDAACEAARR CCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEECCCCCHHHHHHHHH ALLSQGYVVSSSRNDAVDGSKNFQPNNDMHVVIEFHVVCADANADGSSSIAYVNAVQDRY HHHHCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEHHHHH TLKKSNTSASVGLSVFGSLSLPIGSSDDALVKTASETIPAGVFYERFFNLVEHFLKIDPA EEECCCCCHHCCEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC RRDRATVKAAEKEPVTPLPEPAPTPQGEPMKMTTPVVPTPPAAPVPLSLPVVAPESGANA CCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCC VPAAASAVVVPAAMRAAAPVAASGSGSVPASGAAPASAASSTPAPASGSASTPASAAVPV CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SAPASASSPASSAATAASTHAASAPAAATLAPVAPASTASAPVSASAPSSTSPTPAAANP CCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VASSAPSGASAPAAN CCCCCCCCCCCCCCC >Mature Secondary Structure MHNRFRLFSVSCALAAATVLAACSSPPKPIYQQEQFDATSSPYAHTFHSKSDAACEAARR CCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEECCCCCHHHHHHHHH ALLSQGYVVSSSRNDAVDGSKNFQPNNDMHVVIEFHVVCADANADGSSSIAYVNAVQDRY HHHHCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEHHHHH TLKKSNTSASVGLSVFGSLSLPIGSSDDALVKTASETIPAGVFYERFFNLVEHFLKIDPA EEECCCCCHHCCEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC RRDRATVKAAEKEPVTPLPEPAPTPQGEPMKMTTPVVPTPPAAPVPLSLPVVAPESGANA CCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCC VPAAASAVVVPAAMRAAAPVAASGSGSVPASGAAPASAASSTPAPASGSASTPASAAVPV CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SAPASASSPASSAATAASTHAASAPAAATLAPVAPASTASAPVSASAPSSTSPTPAAANP CCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VASSAPSGASAPAAN CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA