| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065842
Identifier: 78065842
GI number: 78065842
Start: 1325973
End: 1326803
Strand: Direct
Name: 78065842
Synonym: Bcep18194_A4371
Alternate gene names: NA
Gene position: 1325973-1326803 (Clockwise)
Preceding gene: 78065841
Following gene: 78065843
Centisome position: 35.89
GC content: 67.63
Gene sequence:
>831_bases ATGCGGGCGTGCGCACTGCCAGTCAACCCGAAAACAGGCCGACCCATGTGTACTCTTCATCTTCAGTCCGGCGGCGCCGC CGCGTATGCGGACGATGCCGGGCGTCCCGCCGATGCGCCGGACCCCGCGCTCGTCGAGGATCTCGTCTGCGCGAACCGCA TCCTGTTCGACCAGGGCATCGTCGATGCCTTCGGCCATGCCAGCGTCCGTCATGACAAGGATCCGCAACGCTTCCTGCTG GCGCGCAACATGGCGCCGGGTACCGTCGGCATCGACGACATCGTCGAATTCACGCTGGACGGCGTGCCGGTCAATGCCGG CGGGCGCGCCGTCTATCTGGAGCGCTTCATTCACGGCGAGATCTACAAGGCGCGTCCGGACGTGCAGGCGATCGTGCACA GCCATTCGCCGACCGTGCTGCCGTTCAGCGTGACGAAACGCACGCCGCTGCGGCCGGTGTGCCACATGAGCGGATTTCTC GGCGCGGGTACGCCCGTGTTCGAGATTCGCGATACCGCCGGCGACGCGACCGACCTGCTCGTGCGAGACAACGCGCTCGG CGCGGCACTGGCGCAGCGGCTCGGCCGTGCGGCGTTCGTGCTGATGCGCGGCCACGGTTCGACCGTGGTGGCGCCGACGC TCAAGCAGGCCGTGTATCGCGCGGTCTATGCGGAAGTCAATGCGCGCATGCAGATCGAGGCGCTGCAACTGGGCGACGTG GTCTATCTCAGCGAGCAGGAAGCCGCGACCGCGTGTGCCAACATCGAAACGCAGGTCGAGCGCCCGTGGGCGCTGTGGAA GCAGCGCGTGCAGCGCGGCGACATGCGCTGA
Upstream 100 bases:
>100_bases ATAGTCAATGGGCTATCTGTTTGGCGATCAATAGCTAATAGACCTATGGTCGGCCCGGTTCTAAGCTGGCCGGGTGCTTG ACGGTCCGCATCGAGACGCG
Downstream 100 bases:
>100_bases CCGGCGCCCGAATCATCGAGGAGACGAGTATGGACGAGCAGTTGATAACCGGCCGTTTGCTGATCGACGGCGAACTGGTC GACAGCGAGACCGGTGAGTG
Product: class II aldolase/adducin-like
Products: NA
Alternate protein names: Class II Aldolase; Class II Aldolase/Adducin-Like; Class II Aldolase/Adducin-Like Protein; Aldolase; Adducin; Aldolase Domain-Containing Protein; Decarboxylase Protein; Class II Aldolase/Adducin Domain-Containing Protein; Ribulose-5-Phosphate 4-Epimerase
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MRACALPVNPKTGRPMCTLHLQSGGAAAYADDAGRPADAPDPALVEDLVCANRILFDQGIVDAFGHASVRHDKDPQRFLL ARNMAPGTVGIDDIVEFTLDGVPVNAGGRAVYLERFIHGEIYKARPDVQAIVHSHSPTVLPFSVTKRTPLRPVCHMSGFL GAGTPVFEIRDTAGDATDLLVRDNALGAALAQRLGRAAFVLMRGHGSTVVAPTLKQAVYRAVYAEVNARMQIEALQLGDV VYLSEQEAATACANIETQVERPWALWKQRVQRGDMR
Sequences:
>Translated_276_residues MRACALPVNPKTGRPMCTLHLQSGGAAAYADDAGRPADAPDPALVEDLVCANRILFDQGIVDAFGHASVRHDKDPQRFLL ARNMAPGTVGIDDIVEFTLDGVPVNAGGRAVYLERFIHGEIYKARPDVQAIVHSHSPTVLPFSVTKRTPLRPVCHMSGFL GAGTPVFEIRDTAGDATDLLVRDNALGAALAQRLGRAAFVLMRGHGSTVVAPTLKQAVYRAVYAEVNARMQIEALQLGDV VYLSEQEAATACANIETQVERPWALWKQRVQRGDMR >Mature_276_residues MRACALPVNPKTGRPMCTLHLQSGGAAAYADDAGRPADAPDPALVEDLVCANRILFDQGIVDAFGHASVRHDKDPQRFLL ARNMAPGTVGIDDIVEFTLDGVPVNAGGRAVYLERFIHGEIYKARPDVQAIVHSHSPTVLPFSVTKRTPLRPVCHMSGFL GAGTPVFEIRDTAGDATDLLVRDNALGAALAQRLGRAAFVLMRGHGSTVVAPTLKQAVYRAVYAEVNARMQIEALQLGDV VYLSEQEAATACANIETQVERPWALWKQRVQRGDMR
Specific function: Unknown
COG id: COG0235
COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29845; Mature: 29845
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRACALPVNPKTGRPMCTLHLQSGGAAAYADDAGRPADAPDPALVEDLVCANRILFDQGI CCEECCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH VDAFGHASVRHDKDPQRFLLARNMAPGTVGIDDIVEFTLDGVPVNAGGRAVYLERFIHGE HHHHCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEEEHHHHCCC IYKARPDVQAIVHSHSPTVLPFSVTKRTPLRPVCHMSGFLGAGTPVFEIRDTAGDATDLL EEECCCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCEEEE VRDNALGAALAQRLGRAAFVLMRGHGSTVVAPTLKQAVYRAVYAEVNARMQIEALQLGDV EECCHHHHHHHHHHCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCEEEEEEEEECCE VYLSEQEAATACANIETQVERPWALWKQRVQRGDMR EEECCHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure MRACALPVNPKTGRPMCTLHLQSGGAAAYADDAGRPADAPDPALVEDLVCANRILFDQGI CCEECCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH VDAFGHASVRHDKDPQRFLLARNMAPGTVGIDDIVEFTLDGVPVNAGGRAVYLERFIHGE HHHHCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEEEHHHHCCC IYKARPDVQAIVHSHSPTVLPFSVTKRTPLRPVCHMSGFLGAGTPVFEIRDTAGDATDLL EEECCCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCEEEE VRDNALGAALAQRLGRAAFVLMRGHGSTVVAPTLKQAVYRAVYAEVNARMQIEALQLGDV EECCHHHHHHHHHHCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCEEEEEEEEECCE VYLSEQEAATACANIETQVERPWALWKQRVQRGDMR EEECCHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA