| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is hisM [H]
Identifier: 78065760
GI number: 78065760
Start: 1225869
End: 1226582
Strand: Direct
Name: hisM [H]
Synonym: Bcep18194_A4288
Alternate gene names: 78065760
Gene position: 1225869-1226582 (Clockwise)
Preceding gene: 78065759
Following gene: 78065761
Centisome position: 33.18
GC content: 65.13
Gene sequence:
>714_bases ATGATCGAGATTCTCCAGGAATTCGGCCAGGCGTTCCTTTACTGGGACGGCCAGCGCCTCTCCGGCCTCGCGGTGACGCT GTGGCTGCTCGTCGCGTCGATTTCGCTCGGCTTCGTGTGCGCGGTGCCGCTCGCGGTGGCGCGCGTGTCGAAGAACAAGT GGGTGTCGACGCCGGTGCGGTTCTACACGTACGTGTTCCGCGGCACGCCGCTCTACGTGCAGTTGCTGCTGCTGTACACG GGTATGTACAGCCTCGAGTTCGTGCGTTCGCACTCGCTGCTCGACGCGTTCTTCCGCAGCGGTTTCAACTGCGCGATTCT CGCGTTCGCGCTGAACACCTGCGCGTACACGACCGAGATCTTCGCGGGGGCGATCCGCGCGATTCCGCACGGTGAGGTCG AGGCTGCGCGTGCGTACGGGATGTCGCCGTTCACGATGTATCGCCGCGTGATCCTGCCGTCGGCGTTGCGCCGCGCGCTG CCGCTGTACAGCAACGAGGTGATCCTGATGCTGCACGCGACGACCGTCGCGTTCACCGCGACCGTGCCGGACATCCTGAA GGTCGCGCGCGATGCGAATTCCGCGACCTACATGGCGTTCCAGTCGTTCGGAATCGCCGCGCTGATCTATCTTGCGGTAT CGTTCGCACTCGTCGCGGCGTTTCGCCGCGCGGAGCGCCACTGGCTTGCGTATCTCGCGGCCGCCCGTCATTGA
Upstream 100 bases:
>100_bases TCGTCGCGGCGCTGATCTATCTCGCGATCACGACCGTTTCCAACCTCGTGCTGATCCAGCTCGAGAAGCGTTATTCCATG GGCGTGCGGCACGCAGATCT
Downstream 100 bases:
>100_bases ATCACTTCGAGGAGAGCCAGTTGGCCGAGATCACTCAAACGAGCGCTGCCGCTTCCACCAAGCTTGCCGCGGTCGACATT CACAAGCGCTACGGTGACAA
Product: ABC polar amino acid transporter, inner membrane subunit
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MIEILQEFGQAFLYWDGQRLSGLAVTLWLLVASISLGFVCAVPLAVARVSKNKWVSTPVRFYTYVFRGTPLYVQLLLLYT GMYSLEFVRSHSLLDAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYGMSPFTMYRRVILPSALRRAL PLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERHWLAYLAAARH
Sequences:
>Translated_237_residues MIEILQEFGQAFLYWDGQRLSGLAVTLWLLVASISLGFVCAVPLAVARVSKNKWVSTPVRFYTYVFRGTPLYVQLLLLYT GMYSLEFVRSHSLLDAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYGMSPFTMYRRVILPSALRRAL PLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERHWLAYLAAARH >Mature_237_residues MIEILQEFGQAFLYWDGQRLSGLAVTLWLLVASISLGFVCAVPLAVARVSKNKWVSTPVRFYTYVFRGTPLYVQLLLLYT GMYSLEFVRSHSLLDAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYGMSPFTMYRRVILPSALRRAL PLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERHWLAYLAAARH
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4160
COG function: function code E; ABC-type arginine/histidine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788645, Length=235, Percent_Identity=62.5531914893617, Blast_Score=317, Evalue=5e-88, Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=35.0467289719626, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1788226, Length=193, Percent_Identity=36.2694300518135, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1787030, Length=209, Percent_Identity=29.1866028708134, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788646, Length=198, Percent_Identity=29.2929292929293, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1787087, Length=209, Percent_Identity=25.3588516746411, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=27.8301886792453, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1786874, Length=210, Percent_Identity=25.2380952380952, Blast_Score=61, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26418; Mature: 26418
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEILQEFGQAFLYWDGQRLSGLAVTLWLLVASISLGFVCAVPLAVARVSKNKWVSTPVR CHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH FYTYVFRGTPLYVQLLLLYTGMYSLEFVRSHSLLDAFFRSGFNCAILAFALNTCAYTTEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FAGAIRAIPHGEVEAARAYGMSPFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTA HHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHH TVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERHWLAYLAAARH HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIEILQEFGQAFLYWDGQRLSGLAVTLWLLVASISLGFVCAVPLAVARVSKNKWVSTPVR CHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH FYTYVFRGTPLYVQLLLLYTGMYSLEFVRSHSLLDAFFRSGFNCAILAFALNTCAYTTEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FAGAIRAIPHGEVEAARAYGMSPFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTA HHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHH TVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERHWLAYLAAARH HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]