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The map label for this gene is 78065352

Identifier: 78065352

GI number: 78065352

Start: 796326

End: 796655

Strand: Reverse

Name: 78065352

Synonym: Bcep18194_A3878

Alternate gene names: NA

Gene position: 796655-796326 (Counterclockwise)

Preceding gene: 78065361

Following gene: 78065351

Centisome position: 21.57

GC content: 66.36

Gene sequence:

>330_bases
ATGCTGAACTGGAACGAATACCGGAAGGAACTCTCGACGCGCATCGGCGAGATCGCCAAGCTGTCGCCCGATACGCTGGC
CGGCTACAAGGCGCTGTCGGGCGCCGGTGCCAAGACGGGCCATCTCGACGCGAAGACGCGCGAACTGATCGCGCTCGCGG
TCGCCGTCACGACGCGCTGCGACGGCTGTATCGCCGTGCACACCGCGGAAGCGGCCAAGCATGGCGCGACCAAAGAGGAA
GTGGCGGAAGCGCTCGGCGTGGCAATTGCACTGAACGCGGGTGCGGCGCTTGTCTATTCGGCACGCGTGATGGACGCGCT
CGGCGAGTGA

Upstream 100 bases:

>100_bases
AGCGTATCGAAACCCTCAGCGCGAACGATCAGAATAGCCCTGCATCGCCCGAGATCGCGGCGCCCGCCGCCTTCCTCACC
CCTACTCGAAAGGACGCATC

Downstream 100 bases:

>100_bases
GCTTGACGGCCGCGGCGCTGCCGTCAGGTGGCGGCGCCCGGCCGCATTGGCCGCATTGGCCGCATGGCCGCCCGGTTGCG
CGTCGCGCATCCGGGCCGGC

Product: alkylhydroperoxidase AhpD core

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MLNWNEYRKELSTRIGEIAKLSPDTLAGYKALSGAGAKTGHLDAKTRELIALAVAVTTRCDGCIAVHTAEAAKHGATKEE
VAEALGVAIALNAGAALVYSARVMDALGE

Sequences:

>Translated_109_residues
MLNWNEYRKELSTRIGEIAKLSPDTLAGYKALSGAGAKTGHLDAKTRELIALAVAVTTRCDGCIAVHTAEAAKHGATKEE
VAEALGVAIALNAGAALVYSARVMDALGE
>Mature_109_residues
MLNWNEYRKELSTRIGEIAKLSPDTLAGYKALSGAGAKTGHLDAKTRELIALAVAVTTRCDGCIAVHTAEAAKHGATKEE
VAEALGVAIALNAGAALVYSARVMDALGE

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 11294; Mature: 11294

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNWNEYRKELSTRIGEIAKLSPDTLAGYKALSGAGAKTGHLDAKTRELIALAVAVTTRC
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
DGCIAVHTAEAAKHGATKEEVAEALGVAIALNAGAALVYSARVMDALGE
CCEEEEEEHHHHHCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNWNEYRKELSTRIGEIAKLSPDTLAGYKALSGAGAKTGHLDAKTRELIALAVAVTTRC
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
DGCIAVHTAEAAKHGATKEEVAEALGVAIALNAGAALVYSARVMDALGE
CCEEEEEEHHHHHCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]