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The map label for this gene is ybgF [C]

Identifier: 78065361

GI number: 78065361

Start: 804372

End: 805121

Strand: Reverse

Name: ybgF [C]

Synonym: Bcep18194_A3887

Alternate gene names: 78065361

Gene position: 805121-804372 (Counterclockwise)

Preceding gene: 78065362

Following gene: 78065352

Centisome position: 21.79

GC content: 65.73

Gene sequence:

>750_bases
ATGACGCACCGTGTATCCCTGCTGCGCGTTGCCGCAGCATTCTGCGTCGCCGGCGCGGCGTGGTCGGCCGCGCCGGCGCA
CGCCGGCGTGTTCGACGACAACGAAGCGCGCCGCGCCGTGCTCGATCTGCGCAGCAAAACCGACAACCTGGCGAGCCAGT
TGTCGGCCGCCCAGCGTACGATCCTCGATCAATCCGGCCGTCTCGACCAGCTGAACCAGCAGGTCGCGACGCTGCGCGGC
GAGAACGAGGACCTGACGAACCGGCTGACGACGCTCGAGCGGCAGCAGAAGGAGTACTACCAGGATCTCGACACGCGGCT
CAAGAAGTTCGAGCCGCAGCAGGCGACGATCGATGGTGTCGAAGGCACCGTGCAGCCGGGTGAAACGGATGCGCTCAGTG
CGGCGCAGCAGCAGTTCCGCAACGGCAACTTCAAGGCGGCGGCGGCTTCGTTCCGCGCGTTCATCGCGAAGTATCCGCAG
AGCCCCTACCAGCCGACCGCGCAGTACTGGTATGGCAACGCGCAATACGCGCTGCGCGACTACCGCGGTTCGACTGCAAC
GTGGCAAGGGATCGTCAGCAAGTTCCCGCAGCATCCGCGCGCAGCCGACGCCCTCGTGGCAATCGGCACGAACCAGCTCG
AGCAAGGCCAGAAGGCGGCCGCGAAAAAGACGTTCGAGCAGGTCGTTTCGCAGTATGCCGGGTCGAACGCTGCGCAGACC
GCGCAGGGCAAGCTCGAGACGATCAAATAA

Upstream 100 bases:

>100_bases
AAGGAAAAGCCGCAGGCAGCGGGTCACGACGAAGCATCGTGGGCGCAGAACCGTCGCGCCGACCTCGTCTACCAACAGTA
AGTAACGGAAGAATCGCCGT

Downstream 100 bases:

>100_bases
TTATCGCGGCGGGTTGTTGACAGCCTGGCAATCCGCCGCTATAATTTTTTGCTCTTTGGGTCGCTTGCCAAGTTGTTGAA
GCAACGGGCCAACAGAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTHRVSLLRVAAAFCVAGAAWSAAPAHAGVFDDNEARRAVLDLRSKTDNLASQLSAAQRTILDQSGRLDQLNQQVATLRG
ENEDLTNRLTTLERQQKEYYQDLDTRLKKFEPQQATIDGVEGTVQPGETDALSAAQQQFRNGNFKAAAASFRAFIAKYPQ
SPYQPTAQYWYGNAQYALRDYRGSTATWQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQT
AQGKLETIK

Sequences:

>Translated_249_residues
MTHRVSLLRVAAAFCVAGAAWSAAPAHAGVFDDNEARRAVLDLRSKTDNLASQLSAAQRTILDQSGRLDQLNQQVATLRG
ENEDLTNRLTTLERQQKEYYQDLDTRLKKFEPQQATIDGVEGTVQPGETDALSAAQQQFRNGNFKAAAASFRAFIAKYPQ
SPYQPTAQYWYGNAQYALRDYRGSTATWQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQT
AQGKLETIK
>Mature_248_residues
THRVSLLRVAAAFCVAGAAWSAAPAHAGVFDDNEARRAVLDLRSKTDNLASQLSAAQRTILDQSGRLDQLNQQVATLRGE
NEDLTNRLTTLERQQKEYYQDLDTRLKKFEPQQATIDGVEGTVQPGETDALSAAQQQFRNGNFKAAAASFRAFIAKYPQS
PYQPTAQYWYGNAQYALRDYRGSTATWQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQTA
QGKLETIK

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybgF [H]

Homologues:

Organism=Escherichia coli, GI1786963, Length=102, Percent_Identity=34.3137254901961, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27329; Mature: 27197

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCHHCCC
>Mature Secondary Structure 
THRVSLLRVAAAFCVAGAAWSAAPAHAGVFDDNEARRAVLDLRSKTDNLASQLSAAQRT
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILDQSGRLDQLNQQVATLRGENEDLTNRLTTLERQQKEYYQDLDTRLKKFEPQQATIDGV
HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
EGTVQPGETDALSAAQQQFRNGNFKAAAASFRAFIAKYPQSPYQPTAQYWYGNAQYALRD
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHH
YRGSTATWQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQT
HCCCCHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AQGKLETIK
HCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]