| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is mutL
Identifier: 78065327
GI number: 78065327
Start: 759905
End: 761890
Strand: Reverse
Name: mutL
Synonym: Bcep18194_A3853
Alternate gene names: 78065327
Gene position: 761890-759905 (Counterclockwise)
Preceding gene: 78065329
Following gene: 78065326
Centisome position: 20.62
GC content: 69.79
Gene sequence:
>1986_bases ATGTCCGATATCACCGAAACGGCGGCGGGCGCCGCGCCCGCCCCTGCTCCGCGCCCGCTGCGCGCGATCCAGCCCCTGCC CGACCAGCTGATCAGCCAGATCGCCGCCGGCGAGGTCGTCGAACGCCCGGCGTCGGTCGTCAAGGAGCTGCTCGAGAACG CGATGGACGCCGGCGCCAGCACGCTGCGCATCGTGCTGGAAGAAGGCGGCGTCAAGCGCATCTCGATCACCGACGACGGC TGCGGGATTCCGCCGGACGAGCTGGCGCTCGCGCTGATGCGCCACGCGACCAGCAAGATCCGCTCGCTCGAGGAACTCGA GGCAGTCGCCACGCTCGGGTTCCGCGGCGAAGCGCTGGCGTCGATCGCGTCGGTCGCCGAGATGTCGATCACGAGCCGGA CGGCCGATGCCGCGCATGCGATGAAGATCGACGCGCAGACGGGCGTGCTGTCCCCCGCCGCCGGCTCGACCGGCACGACG ATCGAGGTCCGCGAGCTGTACTTCAATACGCCCGCGCGCCGCAAGTTCCTGAAGAGCGAGCAGACCGAGTTCGGACACTG CCTGGAAATGATCCGCCGCGCAGCGCTCGCGCGGCCGGACGTCGCGATCTCGGTACTGCACAACGGCAAGGCGGTCGAGC ACTGGAATGCGACCGAGCCCGCGCAGCGCGTCGCGAAAATCCTCGGCGACAGCTTCGCGACCGCGCACCTGCCGCTCGAC GAGCAGGCCGGCCCGCTTGCGGTCTACGGCTGCGCAGGCCTGCCGACCGCGAGCCGCGGGCGCGCCGACCAGCAATACTT CTTCGTCAACGGCCGCTTCGTGCGCGACAAGCTGCTGACGCACGCGGTGCGCGCTGCCTATGAGGACGTGCTGCACGGCG ACCGCTACCCGTCTTACGTGCTGTTCCTCGACCTGCCGCCCGAAGCCGTCGACGTGAACGTGCACCCGTCGAAGATCGAG GTGCGTTTCCGCGATTCGCGCTCGATCCACCAATATGTTTTCCATGCGGTCCAGCGCGCGCTGGCGCGCCACGCGGGCGC GTCGCCGGAGACCACGGCGGGCGGCCATGCCGCGCAACTCTCACCGGCGCCGCGCGGGCCCGCTTCGTTTCTGGACACCC CGCTCGGCCAGAGCCAGCAGGGCAACGCGATCGGCGGCAGCGGCTTCTCGCCGTCGTCGTCGTCATCGTCGGGCAACACC TGGATGCGCCAGGCGCGGATGACCCAGGGCACGCTGCCCGTCGCGCAGCCGCTCGCGCTCTATGACGCGCTGTTCGGCCG CAAGGACACGGGCGCGGGCACGCCGGACGGCACGACGACCATCGCCCGCGATTCGGCCGACGCGCCGCTTGCGCCGCTGC CGGGCTTCCTGGCTTCGCCGATCGCGGCCACTGCTCACGACGAGCAGCCGCTCGGCTTCGCGCTCGGCCAGATCCACGGC ATCTACGTGCTCGCGCAGAACGCGCACGGCCTCGTGATCGTCGACATGCACGCAGCCCACGAGCGGATCCTGTACGAACA GTTCAAGAACGCGCTTGCCGACCGCTCGGTCGCCGTGCAGGCGCTGCTGCTGCCGATCTCCATGACGGCCACGCCGGTCG AGATCGGCACGGTCGAGGAAGAACGCGACACGCTCGAATCGCTCGGCTTCGACCTGGCGGTACTGTCGCCGACGACGCTC GCGATCCGCGCGGTCCCGGCGTTGCTGAAGGATGCCGACCTGCAGTCGCTCGCGCGCGCGGTGCTCGCCGATCTTCACGC GTTCGGCGGCTCTCGCGTGCTCACCGAGCGTCAGCACGAACTGCTCGGTACGCTCGCCTGCCATCACGCGGTACGTGCGA ACCGGCGCCTGACGCTCGACGAGATGAATGCACTGCTGCGGCAGATGGAGGCGACCGAACGCGCGGACCAGTGCAATCAC GGCCGGCCGACGTGGTATCAGCTCACGCTGAACGATCTCGACCGCCTCTTCATGCGCGGCCAATGA
Upstream 100 bases:
>100_bases TGTAACGAACCCATGATACCGAAACTACCTTAAGGCTCCGTGAAAAAACGTAACCGCCGGTCGCCCCGGCACGCATTCAC CGCCTCGCTATAATTCGGCC
Downstream 100 bases:
>100_bases GCGCGGCACCGCACGCCAGCCCGACGACGATCGCCTGCCTGCTCGGCCCCACCGCATCGGGCAAGACGGCCGCGGCGCTG GCGCTCGCCGCGCGCCGCCC
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 661; Mature: 660
Protein sequence:
>661_residues MSDITETAAGAAPAPAPRPLRAIQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGASTLRIVLEEGGVKRISITDDG CGIPPDELALALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMSITSRTADAAHAMKIDAQTGVLSPAAGSTGTT IEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRAALARPDVAISVLHNGKAVEHWNATEPAQRVAKILGDSFATAHLPLD EQAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVHPSKIE VRFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAQLSPAPRGPASFLDTPLGQSQQGNAIGGSGFSPSSSSSSGNT WMRQARMTQGTLPVAQPLALYDALFGRKDTGAGTPDGTTTIARDSADAPLAPLPGFLASPIAATAHDEQPLGFALGQIHG IYVLAQNAHGLVIVDMHAAHERILYEQFKNALADRSVAVQALLLPISMTATPVEIGTVEEERDTLESLGFDLAVLSPTTL AIRAVPALLKDADLQSLARAVLADLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNH GRPTWYQLTLNDLDRLFMRGQ
Sequences:
>Translated_661_residues MSDITETAAGAAPAPAPRPLRAIQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGASTLRIVLEEGGVKRISITDDG CGIPPDELALALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMSITSRTADAAHAMKIDAQTGVLSPAAGSTGTT IEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRAALARPDVAISVLHNGKAVEHWNATEPAQRVAKILGDSFATAHLPLD EQAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVHPSKIE VRFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAQLSPAPRGPASFLDTPLGQSQQGNAIGGSGFSPSSSSSSGNT WMRQARMTQGTLPVAQPLALYDALFGRKDTGAGTPDGTTTIARDSADAPLAPLPGFLASPIAATAHDEQPLGFALGQIHG IYVLAQNAHGLVIVDMHAAHERILYEQFKNALADRSVAVQALLLPISMTATPVEIGTVEEERDTLESLGFDLAVLSPTTL AIRAVPALLKDADLQSLARAVLADLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNH GRPTWYQLTLNDLDRLFMRGQ >Mature_660_residues SDITETAAGAAPAPAPRPLRAIQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGASTLRIVLEEGGVKRISITDDGC GIPPDELALALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMSITSRTADAAHAMKIDAQTGVLSPAAGSTGTTI EVRELYFNTPARRKFLKSEQTEFGHCLEMIRRAALARPDVAISVLHNGKAVEHWNATEPAQRVAKILGDSFATAHLPLDE QAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVHPSKIEV RFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAQLSPAPRGPASFLDTPLGQSQQGNAIGGSGFSPSSSSSSGNTW MRQARMTQGTLPVAQPLALYDALFGRKDTGAGTPDGTTTIARDSADAPLAPLPGFLASPIAATAHDEQPLGFALGQIHGI YVLAQNAHGLVIVDMHAAHERILYEQFKNALADRSVAVQALLLPISMTATPVEIGTVEEERDTLESLGFDLAVLSPTTLA IRAVPALLKDADLQSLARAVLADLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHG RPTWYQLTLNDLDRLFMRGQ
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=329, Percent_Identity=34.6504559270517, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI4505911, Length=351, Percent_Identity=28.2051282051282, Blast_Score=144, Evalue=3e-34, Organism=Homo sapiens, GI189458898, Length=351, Percent_Identity=28.2051282051282, Blast_Score=144, Evalue=4e-34, Organism=Homo sapiens, GI189458896, Length=341, Percent_Identity=29.3255131964809, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI4505913, Length=351, Percent_Identity=26.2108262108262, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI310128478, Length=351, Percent_Identity=26.2108262108262, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI263191589, Length=234, Percent_Identity=31.6239316239316, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI310128480, Length=304, Percent_Identity=24.3421052631579, Blast_Score=93, Evalue=7e-19, Organism=Homo sapiens, GI91992160, Length=271, Percent_Identity=27.3062730627306, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI91992162, Length=271, Percent_Identity=27.3062730627306, Blast_Score=77, Evalue=6e-14, Organism=Escherichia coli, GI1790612, Length=581, Percent_Identity=39.0705679862306, Blast_Score=335, Evalue=6e-93, Organism=Caenorhabditis elegans, GI71991825, Length=320, Percent_Identity=34.6875, Blast_Score=168, Evalue=7e-42, Organism=Caenorhabditis elegans, GI17562796, Length=364, Percent_Identity=25.8241758241758, Blast_Score=133, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6323819, Length=403, Percent_Identity=30.0248138957816, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6324247, Length=367, Percent_Identity=26.158038147139, Blast_Score=129, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6325093, Length=699, Percent_Identity=20.7439198855508, Blast_Score=104, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6323063, Length=395, Percent_Identity=22.7848101265823, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI17136968, Length=313, Percent_Identity=34.5047923322684, Blast_Score=178, Evalue=1e-44, Organism=Drosophila melanogaster, GI17136970, Length=356, Percent_Identity=26.123595505618, Blast_Score=102, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 70778; Mature: 70647
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDITETAAGAAPAPAPRPLRAIQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGAS CCCHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TLRIVLEEGGVKRISITDDGCGIPPDELALALMRHATSKIRSLEELEAVATLGFRGEALA EEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH SIASVAEMSITSRTADAAHAMKIDAQTGVLSPAAGSTGTTIEVRELYFNTPARRKFLKSE HHHHHHHHHHHHHCCHHHHHEEEECCCCCCCCCCCCCCCEEEEHHHHHCCHHHHHHHHHH QTEFGHCLEMIRRAALARPDVAISVLHNGKAVEHWNATEPAQRVAKILGDSFATAHLPLD HHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHCCCCCEEECCCC EQAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYV CCCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE LFLDLPPEAVDVNVHPSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAQL EEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEC SPAPRGPASFLDTPLGQSQQGNAIGGSGFSPSSSSSSGNTWMRQARMTQGTLPVAQPLAL CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH YDALFGRKDTGAGTPDGTTTIARDSADAPLAPLPGFLASPIAATAHDEQPLGFALGQIHG HHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCHHCCCCCCCCHHHHHHHCE IYVLAQNAHGLVIVDMHAAHERILYEQFKNALADRSVAVQALLLPISMTATPVEIGTVEE EEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHH ERDTLESLGFDLAVLSPTTLAIRAVPALLKDADLQSLARAVLADLHAFGGSRVLTERQHE HHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH LLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLNDLDRLFMRG HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCC Q C >Mature Secondary Structure SDITETAAGAAPAPAPRPLRAIQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGAS CCHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TLRIVLEEGGVKRISITDDGCGIPPDELALALMRHATSKIRSLEELEAVATLGFRGEALA EEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH SIASVAEMSITSRTADAAHAMKIDAQTGVLSPAAGSTGTTIEVRELYFNTPARRKFLKSE HHHHHHHHHHHHHCCHHHHHEEEECCCCCCCCCCCCCCCEEEEHHHHHCCHHHHHHHHHH QTEFGHCLEMIRRAALARPDVAISVLHNGKAVEHWNATEPAQRVAKILGDSFATAHLPLD HHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHCCCCCEEECCCC EQAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYV CCCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE LFLDLPPEAVDVNVHPSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAQL EEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEC SPAPRGPASFLDTPLGQSQQGNAIGGSGFSPSSSSSSGNTWMRQARMTQGTLPVAQPLAL CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH YDALFGRKDTGAGTPDGTTTIARDSADAPLAPLPGFLASPIAATAHDEQPLGFALGQIHG HHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCHHCCCCCCCCHHHHHHHCE IYVLAQNAHGLVIVDMHAAHERILYEQFKNALADRSVAVQALLLPISMTATPVEIGTVEE EEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHH ERDTLESLGFDLAVLSPTTLAIRAVPALLKDADLQSLARAVLADLHAFGGSRVLTERQHE HHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH LLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLNDLDRLFMRG HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]