| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is dgk [H]
Identifier: 78065317
GI number: 78065317
Start: 750962
End: 751648
Strand: Reverse
Name: dgk [H]
Synonym: Bcep18194_A3843
Alternate gene names: 78065317
Gene position: 751648-750962 (Counterclockwise)
Preceding gene: 78065318
Following gene: 78065316
Centisome position: 20.35
GC content: 66.08
Gene sequence:
>687_bases ATGACCCTGACTCCCCTTACCGTTACTGCGCCCGACCTGCGCGCCCCGCATCGCTATCTCGTGATCGAAGGCCCGATCGG AGTCGGCAAGACGACGCTCGCGCGCCTGCTCGGCGAACGCTGGTCGATGCAGACGCTGCTCGAGCGCCCGCAGGACAACC CGTTCCTCGAACGCTTCTATCGCGACACCGCGCGCTACGCGCTGCCCGTGCAGCTGTCGTTCGCGCTGCAGCGTGCGCAG CAGGCGCGCGAGCTGATCGGTGCGCTCGAAACGGGCCGCCCGGTCATCGCCGATTTCATGCCGCAGAAAAACGACATCTT CGCGCGGCTGAACCTTCCGGAAGACGAGTGGCAGCTCTACCGCTCGGTTGCGACGCACGTGGACGTGCCGCAGGCGCCGT CGCCCGACCTCGTCGTCTATCTGCAGGCGAGCCCTGAAGTGCTGTTCTCGCGCATCCAGAAGCGCGGGCTGCCGATGGAG CTGCAGATCAGCGACGCGTACCTGCGCTCGCTCGTCGACGCGTACAACGAATTCTTCTACCACTACGACCGCACGCCGGT GCTGACGGTCGCCGCGGAACACCTGAACCCGCTGGATTCCCCCGAAGATCTCGCCCTGCTGGTCGAGCGCATCGAGACGA TGCGCGGCCGCAAGGAATTCTTCGTCAAGGGCGAGACGACGCGCTGA
Upstream 100 bases:
>100_bases CCGCCGTCGCTGATCAGCGGGTCGAGAAGGTGCAGACCTGCCAGTGCCTGATGCAGAAGGCGCTCGCTGCCAGCGAAGAC GCCGACAAGAACCGCTGCCG
Downstream 100 bases:
>100_bases CGCGTCCTCGCCTGTCGTTCTTCACCCATTCGAACCGGATTTCCCATGACCTATCTCCAGGAATCGAGCCGGCCTGCCGT CACGGTGCCCAAGCTGCAGG
Product: deoxynucleoside kinase
Products: NA
Alternate protein names: DGUO kinase; dGK [H]
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTLTPLTVTAPDLRAPHRYLVIEGPIGVGKTTLARLLGERWSMQTLLERPQDNPFLERFYRDTARYALPVQLSFALQRAQ QARELIGALETGRPVIADFMPQKNDIFARLNLPEDEWQLYRSVATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPME LQISDAYLRSLVDAYNEFFYHYDRTPVLTVAAEHLNPLDSPEDLALLVERIETMRGRKEFFVKGETTR
Sequences:
>Translated_228_residues MTLTPLTVTAPDLRAPHRYLVIEGPIGVGKTTLARLLGERWSMQTLLERPQDNPFLERFYRDTARYALPVQLSFALQRAQ QARELIGALETGRPVIADFMPQKNDIFARLNLPEDEWQLYRSVATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPME LQISDAYLRSLVDAYNEFFYHYDRTPVLTVAAEHLNPLDSPEDLALLVERIETMRGRKEFFVKGETTR >Mature_227_residues TLTPLTVTAPDLRAPHRYLVIEGPIGVGKTTLARLLGERWSMQTLLERPQDNPFLERFYRDTARYALPVQLSFALQRAQQ ARELIGALETGRPVIADFMPQKNDIFARLNLPEDEWQLYRSVATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPMEL QISDAYLRSLVDAYNEFFYHYDRTPVLTVAAEHLNPLDSPEDLALLVERIETMRGRKEFFVKGETTR
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dGTP for DNA metabolism. Highly specific toward deoxyguanosine (dGuo) and deoxyinosine (dIno). Only marginal activity is observed with guanosine. UTP is slightly more efficient as ph
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 26167; Mature: 26036
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTPLTVTAPDLRAPHRYLVIEGPIGVGKTTLARLLGERWSMQTLLERPQDNPFLERFY CCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHH RDTARYALPVQLSFALQRAQQARELIGALETGRPVIADFMPQKNDIFARLNLPEDEWQLY HHHHHEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEECCCHHHHHHH RSVATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPMELQISDAYLRSLVDAYNEFFY HHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHH HYDRTPVLTVAAEHLNPLDSPEDLALLVERIETMRGRKEFFVKGETTR HCCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHCCCHHEEEECCCCC >Mature Secondary Structure TLTPLTVTAPDLRAPHRYLVIEGPIGVGKTTLARLLGERWSMQTLLERPQDNPFLERFY CCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHH RDTARYALPVQLSFALQRAQQARELIGALETGRPVIADFMPQKNDIFARLNLPEDEWQLY HHHHHEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEECCCHHHHHHH RSVATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPMELQISDAYLRSLVDAYNEFFY HHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHH HYDRTPVLTVAAEHLNPLDSPEDLALLVERIETMRGRKEFFVKGETTR HCCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHCCCHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]