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The map label for this gene is secF

Identifier: 78065283

GI number: 78065283

Start: 702199

End: 703149

Strand: Reverse

Name: secF

Synonym: Bcep18194_A3807

Alternate gene names: 78065283

Gene position: 703149-702199 (Counterclockwise)

Preceding gene: 78065284

Following gene: 78065282

Centisome position: 19.03

GC content: 62.88

Gene sequence:

>951_bases
ATGGAATTTTTCCGCATCCGTAAAGACATTCCGTTCATGCGGCACGCGCTGGTGTTCAACGTGATCTCGCTGGTCACGTT
CCTCGCCGCCGTGTTCTTCCTGTTCCACCGCGGGCTGCACCTGTCCGTCGAATTCACCGGCGGGACGGTGATCGAGGTGC
AGTACCAGCAGGCCGCTGAACTCGAACCCGTGCGCGCGACGCTCGGCAAGCTCGGCTACGCCGACGCGCAGGTGCAGAAC
TTCGGCACATCGCGCAACGTGCTGATCCGCCTGCAACTGAAGGAAGGCCTCACGTCCGCGCAGCAGAGCGACCAGGTGAT
GGGCGCGCTGAAGGCGCAGAGCCCGGACGTCACGCTGCAGCGCGTCGAGTTCGTCGGCCCGCAGGTCGGCCGGGAGCTCG
CGACCGACGGCCTGCTCGCGCTCGCGTGCGTCGTGATCGGCATCGTGATCTACCTGTCGTTCCGCTTCGAGTGGAAGTAC
GCAGTGGCCGGCATCATCGCCAACCTGCACGACATCGTGATCATTCTCGGCTTCTTCGCGTTCTTCCAGTGGGAGTTCTC
GCTGGCGGTGCTCGCGGCCATCCTCGCGGTGCTCGGCTACTCGGTCAACGAGTCGGTCGTCATCTTCGACCGGATCCGCG
AAACGTTCCGCCGCGAACGCAAGATGAGCGTGCAGGAAGTGATCAACCACGCGATCACGACCACGATGTCGCGTACGATC
ATCACGCACACGTCGACCGAAATGATGGTGCTGTCGATGTTCTTCTTCGGCGGCCCGACGCTGCACTACTTCGCACTCGC
GCTGACGGTCGGCATCATGTTCGGCATCTACTCGTCGGTGTTCGTCGCGGGCTCGCTCGCGATGTGGCTCGGCATCAAGC
GCGAAGACCTGATCAAGGAAAAGAAGTCCGCGCACGATCCGGACGATCCGAACGCAGGCGCGCAGGTTTAA

Upstream 100 bases:

>100_bases
GCGCCGCGCGCCGCCGGCAAGCCGCAGCTGCGCAACCGCGCGCAGCAAGGCGTGTCGCCGAAGAAACCGGGCTCGACCCA
ATAAGGCCCCGGAGAAGACC

Downstream 100 bases:

>100_bases
GCGTCACGCTGCTTCGGCACAGACGAAAAGCCGGCCCGGTTGGGCCGGCTTTTTTTTGCCTGCGCCACCCGACGTACATC
GCGCCCCCCCCCGCTCGCCC

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MEFFRIRKDIPFMRHALVFNVISLVTFLAAVFFLFHRGLHLSVEFTGGTVIEVQYQQAAELEPVRATLGKLGYADAQVQN
FGTSRNVLIRLQLKEGLTSAQQSDQVMGALKAQSPDVTLQRVEFVGPQVGRELATDGLLALACVVIGIVIYLSFRFEWKY
AVAGIIANLHDIVIILGFFAFFQWEFSLAVLAAILAVLGYSVNESVVIFDRIRETFRRERKMSVQEVINHAITTTMSRTI
ITHTSTEMMVLSMFFFGGPTLHYFALALTVGIMFGIYSSVFVAGSLAMWLGIKREDLIKEKKSAHDPDDPNAGAQV

Sequences:

>Translated_316_residues
MEFFRIRKDIPFMRHALVFNVISLVTFLAAVFFLFHRGLHLSVEFTGGTVIEVQYQQAAELEPVRATLGKLGYADAQVQN
FGTSRNVLIRLQLKEGLTSAQQSDQVMGALKAQSPDVTLQRVEFVGPQVGRELATDGLLALACVVIGIVIYLSFRFEWKY
AVAGIIANLHDIVIILGFFAFFQWEFSLAVLAAILAVLGYSVNESVVIFDRIRETFRRERKMSVQEVINHAITTTMSRTI
ITHTSTEMMVLSMFFFGGPTLHYFALALTVGIMFGIYSSVFVAGSLAMWLGIKREDLIKEKKSAHDPDDPNAGAQV
>Mature_316_residues
MEFFRIRKDIPFMRHALVFNVISLVTFLAAVFFLFHRGLHLSVEFTGGTVIEVQYQQAAELEPVRATLGKLGYADAQVQN
FGTSRNVLIRLQLKEGLTSAQQSDQVMGALKAQSPDVTLQRVEFVGPQVGRELATDGLLALACVVIGIVIYLSFRFEWKY
AVAGIIANLHDIVIILGFFAFFQWEFSLAVLAAILAVLGYSVNESVVIFDRIRETFRRERKMSVQEVINHAITTTMSRTI
ITHTSTEMMVLSMFFFGGPTLHYFALALTVGIMFGIYSSVFVAGSLAMWLGIKREDLIKEKKSAHDPDDPNAGAQV

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=307, Percent_Identity=38.4364820846906, Blast_Score=241, Evalue=4e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 35254; Mature: 35254

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFFRIRKDIPFMRHALVFNVISLVTFLAAVFFLFHRGLHLSVEFTGGTVIEVQYQQAAE
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECHHHCC
LEPVRATLGKLGYADAQVQNFGTSRNVLIRLQLKEGLTSAQQSDQVMGALKAQSPDVTLQ
CCHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEEHHCCCHHHHHHHHHHHHHCCCCCCHHH
RVEFVGPQVGRELATDGLLALACVVIGIVIYLSFRFEWKYAVAGIIANLHDIVIILGFFA
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFQWEFSLAVLAAILAVLGYSVNESVVIFDRIRETFRRERKMSVQEVINHAITTTMSRTI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ITHTSTEMMVLSMFFFGGPTLHYFALALTVGIMFGIYSSVFVAGSLAMWLGIKREDLIKE
EEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KKSAHDPDDPNAGAQV
HHCCCCCCCCCCCCCC
>Mature Secondary Structure
MEFFRIRKDIPFMRHALVFNVISLVTFLAAVFFLFHRGLHLSVEFTGGTVIEVQYQQAAE
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECHHHCC
LEPVRATLGKLGYADAQVQNFGTSRNVLIRLQLKEGLTSAQQSDQVMGALKAQSPDVTLQ
CCHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEEHHCCCHHHHHHHHHHHHHCCCCCCHHH
RVEFVGPQVGRELATDGLLALACVVIGIVIYLSFRFEWKYAVAGIIANLHDIVIILGFFA
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFQWEFSLAVLAAILAVLGYSVNESVVIFDRIRETFRRERKMSVQEVINHAITTTMSRTI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ITHTSTEMMVLSMFFFGGPTLHYFALALTVGIMFGIYSSVFVAGSLAMWLGIKREDLIKE
EEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KKSAHDPDDPNAGAQV
HHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]