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The map label for this gene is exuR [H]

Identifier: 78065207

GI number: 78065207

Start: 621556

End: 622248

Strand: Reverse

Name: exuR [H]

Synonym: Bcep18194_A3731

Alternate gene names: 78065207

Gene position: 622248-621556 (Counterclockwise)

Preceding gene: 78065211

Following gene: 78065205

Centisome position: 16.84

GC content: 68.4

Gene sequence:

>693_bases
ATGAAAAACGTTCCGCATACCGTGACCGACGCCGCCATCGCGACGATCCGCGACCGGATCGAGGCAGGCGTTTATCCGGT
CGGCAGCCTGCTGCCGGCCCAGCGCCAGCTCTCCGAGGAGCTGGAGATCAGCCGCGCGTCGCTGCGCGAGGCGCTCTCGA
CGCTCGAGGCGCTCGGGATGCTGCGCATCCGCGCCGGCAAGGGCGTGTACGTCGAAAGCGCGCAGGCCACGGCCGCGCAT
GCGTGGCGGTTCGCCGAGCAGTCGTCGCCGCCCGACACGTACCAGATGCGCTATGCGCTCGAAGGGTTCGCCGCGCGGAT
GGCCGCGCACGTCGTCAGCGATGACGACATCGCGTGGTTCGAGGACAACCTCGCCGACCTGCATGTCGCGCTCACCGAAA
GCGCGCTCGACGAGGCGTCGCAGCTCGACTTCGACTTCCACATGCGGATCATCCATCTCGCCGGCAACGCGGCGATCGAA
TCGGTGCTGCGCAGCAGCGCGGACATCATGAAGGAAAGCCAGCGCATGCCGTTCTACCGGCGCGAGCTGCTGCTGTCGAC
GTGGCAGGAGCACCGCGCGATCGTCGACGCGCTGATCGCACGCGATGCGGCTGCGGCAGGCACCGCGATCGAAACGCACA
TCGCGAACGCCGCGCAGCGCGCGGGCATCTTCTTCCCGACGCCGCGCGCATAA

Upstream 100 bases:

>100_bases
GATGCACCGGACAGAGACAGATCGTGGCTTTCCCGTAGGCCGGTCATGCACCGCCTGCGTGCGGATTACAATGCCGGTCA
GACCGGCCAAAGTTCACATC

Downstream 100 bases:

>100_bases
CGCGGGCGGGCGGTCGAGCGGCCCCCGCCGCGCGCACCGCCCGGTCGTACCGGTCAACCTCCCGACGGATCGCGATACGC
GAGCGCACGCTCGATGAACG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKNVPHTVTDAAIATIRDRIEAGVYPVGSLLPAQRQLSEELEISRASLREALSTLEALGMLRIRAGKGVYVESAQATAAH
AWRFAEQSSPPDTYQMRYALEGFAARMAAHVVSDDDIAWFEDNLADLHVALTESALDEASQLDFDFHMRIIHLAGNAAIE
SVLRSSADIMKESQRMPFYRRELLLSTWQEHRAIVDALIARDAAAAGTAIETHIANAAQRAGIFFPTPRA

Sequences:

>Translated_230_residues
MKNVPHTVTDAAIATIRDRIEAGVYPVGSLLPAQRQLSEELEISRASLREALSTLEALGMLRIRAGKGVYVESAQATAAH
AWRFAEQSSPPDTYQMRYALEGFAARMAAHVVSDDDIAWFEDNLADLHVALTESALDEASQLDFDFHMRIIHLAGNAAIE
SVLRSSADIMKESQRMPFYRRELLLSTWQEHRAIVDALIARDAAAAGTAIETHIANAAQRAGIFFPTPRA
>Mature_230_residues
MKNVPHTVTDAAIATIRDRIEAGVYPVGSLLPAQRQLSEELEISRASLREALSTLEALGMLRIRAGKGVYVESAQATAAH
AWRFAEQSSPPDTYQMRYALEGFAARMAAHVVSDDDIAWFEDNLADLHVALTESALDEASQLDFDFHMRIIHLAGNAAIE
SVLRSSADIMKESQRMPFYRRELLLSTWQEHRAIVDALIARDAAAAGTAIETHIANAAQRAGIFFPTPRA

Specific function: Repressor for the exu regulon that encode genes involved in hexuronate utilization. It regulates the exuT, uxaCA and uxuRAB operons. Binds D-tagaturonate and D-fructuronate as inducers [H]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790780, Length=220, Percent_Identity=30.9090909090909, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082208, Length=227, Percent_Identity=28.6343612334802, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1790032, Length=233, Percent_Identity=27.8969957081545, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786303, Length=208, Percent_Identity=29.8076923076923, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1789353, Length=181, Percent_Identity=30.939226519337, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25299; Mature: 25299

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVPHTVTDAAIATIRDRIEAGVYPVGSLLPAQRQLSEELEISRASLREALSTLEALGM
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRIRAGKGVYVESAQATAAHAWRFAEQSSPPDTYQMRYALEGFAARMAAHVVSDDDIAWF
HHEECCCCEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EDNLADLHVALTESALDEASQLDFDFHMRIIHLAGNAAIESVLRSSADIMKESQRMPFYR
HCCHHHHHHHHHHHHHHHHHHCCHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHH
RELLLSTWQEHRAIVDALIARDAAAAGTAIETHIANAAQRAGIFFPTPRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKNVPHTVTDAAIATIRDRIEAGVYPVGSLLPAQRQLSEELEISRASLREALSTLEALGM
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRIRAGKGVYVESAQATAAHAWRFAEQSSPPDTYQMRYALEGFAARMAAHVVSDDDIAWF
HHEECCCCEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EDNLADLHVALTESALDEASQLDFDFHMRIIHLAGNAAIESVLRSSADIMKESQRMPFYR
HCCHHHHHHHHHHHHHHHHHHCCHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHH
RELLLSTWQEHRAIVDALIARDAAAAGTAIETHIANAAQRAGIFFPTPRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA