| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is fur [H]
Identifier: 78065211
GI number: 78065211
Start: 625637
End: 626065
Strand: Reverse
Name: fur [H]
Synonym: Bcep18194_A3735
Alternate gene names: 78065211
Gene position: 626065-625637 (Counterclockwise)
Preceding gene: 78065221
Following gene: 78065207
Centisome position: 16.95
GC content: 61.77
Gene sequence:
>429_bases ATGACCAATCCGACGGATCTCAAGAATATCGGGCTAAAGGCCACCCTACCGCGCCTCAAGATTCTCGAGATCTTCCAGCA AAGCCCGGTGCGCCACCTGACGGCAGAAGACGTCTACCGGAACCTGCTCAACGAGCAGCTCGACATCGGGCTGGCCACCG TTTACCGCGTGCTGACGCAGTTCGAGCAGGCCGGCCTGCTCACCCGCAGCAACTTCGAATCCGGCAAGGCCGTGTTTGAA CTGAACGAAGGCTCGCACCACGATCACCTCGTGTGCCTCGATTGCGGCCGTGTCGAGGAATTCTTCGACGCCGAGATCGA AGGCCGCCAGCAGGCGATCGCGAAGGAGCGCGGCTTCCGGCTCCAGGAGCACTCGCTTGCGATGTACGGTTCCTGCACGA CCGAGAACTGCCCGCACCGCAAGCACTGA
Upstream 100 bases:
>100_bases CCCTCACCGTGCAGGCCCGTGTGCAGGCCGCGCGTGTTTCTGGAACGGCGAAAAGCCGGTAACATTGAAGCCCTGCATTG TACTCTAGGGATGCCTAGCC
Downstream 100 bases:
>100_bases TTCGCGCGCTTCGCGCACGCAGCACGGCCCGGCCGGCATCTCGCCGCCCGGGCCGTGTTCTTTTCGGGATAGCGGCCGCA CGCCGCCGCGTGAGTCGCGC
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTNPTDLKNIGLKATLPRLKILEIFQQSPVRHLTAEDVYRNLLNEQLDIGLATVYRVLTQFEQAGLLTRSNFESGKAVFE LNEGSHHDHLVCLDCGRVEEFFDAEIEGRQQAIAKERGFRLQEHSLAMYGSCTTENCPHRKH
Sequences:
>Translated_142_residues MTNPTDLKNIGLKATLPRLKILEIFQQSPVRHLTAEDVYRNLLNEQLDIGLATVYRVLTQFEQAGLLTRSNFESGKAVFE LNEGSHHDHLVCLDCGRVEEFFDAEIEGRQQAIAKERGFRLQEHSLAMYGSCTTENCPHRKH >Mature_141_residues TNPTDLKNIGLKATLPRLKILEIFQQSPVRHLTAEDVYRNLLNEQLDIGLATVYRVLTQFEQAGLLTRSNFESGKAVFEL NEGSHHDHLVCLDCGRVEEFFDAEIEGRQQAIAKERGFRLQEHSLAMYGSCTTENCPHRKH
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulator for biosynthesis of the siderophore alcaligin E [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=140, Percent_Identity=56.4285714285714, Blast_Score=167, Evalue=3e-43,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16210; Mature: 16078
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPTDLKNIGLKATLPRLKILEIFQQSPVRHLTAEDVYRNLLNEQLDIGLATVYRVLTQ CCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH FEQAGLLTRSNFESGKAVFELNEGSHHDHLVCLDCGRVEEFFDAEIEGRQQAIAKERGFR HHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHCCCCCHHHHHHHHHHCCC LQEHSLAMYGSCTTENCPHRKH CCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure TNPTDLKNIGLKATLPRLKILEIFQQSPVRHLTAEDVYRNLLNEQLDIGLATVYRVLTQ CCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH FEQAGLLTRSNFESGKAVFELNEGSHHDHLVCLDCGRVEEFFDAEIEGRQQAIAKERGFR HHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHCCCCCHHHHHHHHHHCCC LQEHSLAMYGSCTTENCPHRKH CCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA