| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065132
Identifier: 78065132
GI number: 78065132
Start: 543785
End: 544654
Strand: Direct
Name: 78065132
Synonym: Bcep18194_A3656
Alternate gene names: NA
Gene position: 543785-544654 (Clockwise)
Preceding gene: 78065131
Following gene: 78065133
Centisome position: 14.72
GC content: 64.25
Gene sequence:
>870_bases ATGGACAAGCTTGAACAGTTTCTGACGCGCGCCGAAGCACTGCTCGGCCGTCTCGAGGGGATGCTGCCGCCCGCGCCGGC ATCGGTCGACTGGAATGCCGCCCACGCGTTCCGCTGGCGCAAGCGCCAGGGGCGCGGCTATCTGCAGCCGGTGCCGGCCG TTTCGTCGATCACGCTCGACGATCTGCACAACATCGATCGCCAGAAAGGGCTGATCGAACAGAACACGCGGCAGTTCGTG CAGCAGAAGCCGGCCAACAACGTGCTGCTGACCGGCGCGCGCGGTACCGGCAAGTCGTCGCTGATCAAGGCGTGCCTGAA CGCGTATGCGCAGGACGGCCTGCGCCTGATCGAAGTCGACAAGGACGACCTGCATGATCTCGGCGACATCGTCGACCTGA TCTCTCAGCGTCCCGAGCGCTTCATCGTGTTCTGCGACGACCTGTCGTTCGAGGAGGGCGAGTCGGGCTACAAGGCGCTG AAGGTTGCGCTCGACGGCTCGATCGCCGCGCAATCGGACAACGTGCTGATCTATGCGACGTCGAACCGCCGCCATCTGCT GCCCGAGTACATGAGCGACAACGAGACGTACAAGCATCTCCCGGATGGCGAGATTCACCCCGGCGAAGTCGTCGAGGAAA AGATCTCGCTGTCGGAGCGCTTCGGTCTCTGGGTCAGCTTCTATCCGTTCAAGCAGGACGACTACCTCGACATCGTCGGG CACTGGCTGCGTCATTTCGGCTGTCCGGATGCGGAGATCGAATCCGCACGCGGCGACGCGCTTGTATGGGCGCTCGAGCG CGGCTCGCGGTCGGGGCGCGTCGCGTGGCAGTTTGCGCGTGACTGGTCGGGCCGCAAGGAGCAGGCATGA
Upstream 100 bases:
>100_bases CGCGGCGACGCGCAGGCGACCATCTGGACGTGCGACCTGTCGCACGACTACGTGAGCATCAACGCGGATTACCGCTCCTG ATCGGGAGTGCCCGGACGAC
Downstream 100 bases:
>100_bases GCGCGGATCTCGCACAAGGCGCGGTGCGCGCACCCGATGGCCGCAAGGTGACGGAAGTCGCGGTCGGCGTGATGGTGCAG CCGGACGGTAGCTACCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; AAA ATPase Superfamily; Intermediate Filament Protein; AAA+ Superfamily ATPase
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MDKLEQFLTRAEALLGRLEGMLPPAPASVDWNAAHAFRWRKRQGRGYLQPVPAVSSITLDDLHNIDRQKGLIEQNTRQFV QQKPANNVLLTGARGTGKSSLIKACLNAYAQDGLRLIEVDKDDLHDLGDIVDLISQRPERFIVFCDDLSFEEGESGYKAL KVALDGSIAAQSDNVLIYATSNRRHLLPEYMSDNETYKHLPDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLDIVG HWLRHFGCPDAEIESARGDALVWALERGSRSGRVAWQFARDWSGRKEQA
Sequences:
>Translated_289_residues MDKLEQFLTRAEALLGRLEGMLPPAPASVDWNAAHAFRWRKRQGRGYLQPVPAVSSITLDDLHNIDRQKGLIEQNTRQFV QQKPANNVLLTGARGTGKSSLIKACLNAYAQDGLRLIEVDKDDLHDLGDIVDLISQRPERFIVFCDDLSFEEGESGYKAL KVALDGSIAAQSDNVLIYATSNRRHLLPEYMSDNETYKHLPDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLDIVG HWLRHFGCPDAEIESARGDALVWALERGSRSGRVAWQFARDWSGRKEQA >Mature_289_residues MDKLEQFLTRAEALLGRLEGMLPPAPASVDWNAAHAFRWRKRQGRGYLQPVPAVSSITLDDLHNIDRQKGLIEQNTRQFV QQKPANNVLLTGARGTGKSSLIKACLNAYAQDGLRLIEVDKDDLHDLGDIVDLISQRPERFIVFCDDLSFEEGESGYKAL KVALDGSIAAQSDNVLIYATSNRRHLLPEYMSDNETYKHLPDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLDIVG HWLRHFGCPDAEIESARGDALVWALERGSRSGRVAWQFARDWSGRKEQA
Specific function: Unknown
COG id: COG2607
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32665; Mature: 32665
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLEQFLTRAEALLGRLEGMLPPAPASVDWNAAHAFRWRKRQGRGYLQPVPAVSSITLD CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHEEHH DLHNIDRQKGLIEQNTRQFVQQKPANNVLLTGARGTGKSSLIKACLNAYAQDGLRLIEVD HHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEC KDDLHDLGDIVDLISQRPERFIVFCDDLSFEEGESGYKALKVALDGSIAAQSDNVLIYAT CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHEEEEEECCCEEECCCCEEEEEE SNRRHLLPEYMSDNETYKHLPDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLDIVG CCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH HWLRHFGCPDAEIESARGDALVWALERGSRSGRVAWQFARDWSGRKEQA HHHHHCCCCCCHHHCCCCCEEEEEEECCCCCCCEEEEEHHCCCCCCCCC >Mature Secondary Structure MDKLEQFLTRAEALLGRLEGMLPPAPASVDWNAAHAFRWRKRQGRGYLQPVPAVSSITLD CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHEEHH DLHNIDRQKGLIEQNTRQFVQQKPANNVLLTGARGTGKSSLIKACLNAYAQDGLRLIEVD HHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEC KDDLHDLGDIVDLISQRPERFIVFCDDLSFEEGESGYKALKVALDGSIAAQSDNVLIYAT CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHEEEEEECCCEEECCCCEEEEEE SNRRHLLPEYMSDNETYKHLPDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLDIVG CCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH HWLRHFGCPDAEIESARGDALVWALERGSRSGRVAWQFARDWSGRKEQA HHHHHCCCCCCHHHCCCCCEEEEEEECCCCCCCEEEEEHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA