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The map label for this gene is rprY [H]

Identifier: 78065075

GI number: 78065075

Start: 472026

End: 472787

Strand: Reverse

Name: rprY [H]

Synonym: Bcep18194_A3599

Alternate gene names: 78065075

Gene position: 472787-472026 (Counterclockwise)

Preceding gene: 78065080

Following gene: 78065074

Centisome position: 12.8

GC content: 66.93

Gene sequence:

>762_bases
ATGCGAATCGCTCTGATCGATCCGGACGCGCGCCATGCCGCGCTCCTGAACCGCCTGCTCTTTGCGGGTGGTCATGTGTG
CCACGCGTTTCCGTCCAGCACGGCGTTCTTCGAGTGGCTCGCCACCGACACCTGCGACATGCTGATCACCGGCCATTGGG
CCGGCGACCAGCCGGCCGAGGAAGTCATTCCGCGCGCGCAGACCATCCTGCCCGGGCTGCCGGCCATCGCCGTGATGCAG
TTGCCGCGCGAAAGCGAAATCGTGTCGTGCCTGCACGCGGGCGCCGACGATTGCCTCGTGCGCCCCGTGAGCGGGCCCGA
GATGCTCGCGCGCGTCAACGCACTGAGCCGGCGCGCCGGCGTGCGCCGGCCACCCACCCGCTCGCGCGAAATGTATGGCG
AATACGCTTTCGACGCCACGCACTGCCTTGTTCGCTTCGGCGACGCAATCGTTTCACTCACGCCGAAGGAGTTCAGGTTT
GCGCAGTTGCTGTTCACGAACCTGTCGCGGCCGGTGTCGCGCGCCCATATCCTCGAAACGGTGTGGGCGCGCCGCCGCGA
CATGAAGTCGCGCACGCTCGATACCCACGCGTCCCGGCTGCGCAGCAAACTGCAACTGCTTCCGGAGCGCGGCTACCGGC
TGCTGCCGCTCTACGGCTACGGCTATCAGCTCGACCGCGTGCCGATCGAGCCCCCAAATTCGCGGCCCCGGCACGCTGAT
GCCCGGTATGCGGCGAGTGAGGAAATCGCTGAAACGCTATAA

Upstream 100 bases:

>100_bases
ATCGAACCCGAGACCAGCCGGGTGCCGCCAACATTCGAGTGTAGGGGCCGACTCGACGTTATGGCAAGCGCGCGCCGGCG
GCCGTATTGAAGAAACTCTC

Downstream 100 bases:

>100_bases
TATGGGGCTAAACGATAGCCCTCGATATGCAACTCCTCACGATCGGAATCAATCACCACACTGCGCCTGTCGCCCTGCGC
GAACGCGTGGCGTTTCCGCT

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MRIALIDPDARHAALLNRLLFAGGHVCHAFPSSTAFFEWLATDTCDMLITGHWAGDQPAEEVIPRAQTILPGLPAIAVMQ
LPRESEIVSCLHAGADDCLVRPVSGPEMLARVNALSRRAGVRRPPTRSREMYGEYAFDATHCLVRFGDAIVSLTPKEFRF
AQLLFTNLSRPVSRAHILETVWARRRDMKSRTLDTHASRLRSKLQLLPERGYRLLPLYGYGYQLDRVPIEPPNSRPRHAD
ARYAASEEIAETL

Sequences:

>Translated_253_residues
MRIALIDPDARHAALLNRLLFAGGHVCHAFPSSTAFFEWLATDTCDMLITGHWAGDQPAEEVIPRAQTILPGLPAIAVMQ
LPRESEIVSCLHAGADDCLVRPVSGPEMLARVNALSRRAGVRRPPTRSREMYGEYAFDATHCLVRFGDAIVSLTPKEFRF
AQLLFTNLSRPVSRAHILETVWARRRDMKSRTLDTHASRLRSKLQLLPERGYRLLPLYGYGYQLDRVPIEPPNSRPRHAD
ARYAASEEIAETL
>Mature_253_residues
MRIALIDPDARHAALLNRLLFAGGHVCHAFPSSTAFFEWLATDTCDMLITGHWAGDQPAEEVIPRAQTILPGLPAIAVMQ
LPRESEIVSCLHAGADDCLVRPVSGPEMLARVNALSRRAGVRRPPTRSREMYGEYAFDATHCLVRFGDAIVSLTPKEFRF
AQLLFTNLSRPVSRAHILETVWARRRDMKSRTLDTHASRLRSKLQLLPERGYRLLPLYGYGYQLDRVPIEPPNSRPRHAD
ARYAASEEIAETL

Specific function: Member of the two-component regulatory system rprX/rprY [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=226, Percent_Identity=24.3362831858407, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=25.5506607929515, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786599, Length=143, Percent_Identity=29.3706293706294, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1786911, Length=153, Percent_Identity=28.7581699346405, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786784, Length=205, Percent_Identity=22.9268292682927, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1788394, Length=151, Percent_Identity=27.8145695364238, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 28421; Mature: 28421

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIALIDPDARHAALLNRLLFAGGHVCHAFPSSTAFFEWLATDTCDMLITGHWAGDQPAE
CEEEEECCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCHH
EVIPRAQTILPGLPAIAVMQLPRESEIVSCLHAGADDCLVRPVSGPEMLARVNALSRRAG
HHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCC
VRRPPTRSREMYGEYAFDATHCLVRFGDAIVSLTPKEFRFAQLLFTNLSRPVSRAHILET
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCHHHHHHHHHH
VWARRRDMKSRTLDTHASRLRSKLQLLPERGYRLLPLYGYGYQLDRVPIEPPNSRPRHAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCCCCCC
ARYAASEEIAETL
HHHHHHHHHHHCC
>Mature Secondary Structure
MRIALIDPDARHAALLNRLLFAGGHVCHAFPSSTAFFEWLATDTCDMLITGHWAGDQPAE
CEEEEECCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCHH
EVIPRAQTILPGLPAIAVMQLPRESEIVSCLHAGADDCLVRPVSGPEMLARVNALSRRAG
HHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCC
VRRPPTRSREMYGEYAFDATHCLVRFGDAIVSLTPKEFRFAQLLFTNLSRPVSRAHILET
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCHHHHHHHHHH
VWARRRDMKSRTLDTHASRLRSKLQLLPERGYRLLPLYGYGYQLDRVPIEPPNSRPRHAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCCCCCC
ARYAASEEIAETL
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8469117 [H]