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The map label for this gene is ybfB [H]

Identifier: 78065064

GI number: 78065064

Start: 460761

End: 462044

Strand: Direct

Name: ybfB [H]

Synonym: Bcep18194_A3588

Alternate gene names: 78065064

Gene position: 460761-462044 (Clockwise)

Preceding gene: 78065061

Following gene: 78065065

Centisome position: 12.47

GC content: 69.47

Gene sequence:

>1284_bases
ATGAACTGGGCAGTGACACGAATCGGCGGGCGCTTCCACTACGGATGGCTCGCGGCGGCGGTGGTATTCCTGATCCTGCT
GGCGGCGGCCGGCACGCGCGCGACGCCGAGCGTGCTGATGGTGCCGCTCGAACGCGAGCTTGGCTGGAGCCGCGCGACGA
TTTCGCTGGCGATTTCGGTGAACATCGCGCTGTACGGACTGACGGGTCCGTTCGCGGCCGCCGCCATGCAGCGCTTCGGG
CTGCGCCCGACGATCCTCACCGCGCTCGTGACGATGTGCGCGGGCGTCGCGCTGTCGTCGATGATGACGCAGAGCTGGCA
GATGGTGGTGATCTGGGGCCTGATGGTCGGCTGCTCGTCGGGCGTCGTCGCGCTGACGCTGTCCGCGACCTTCGTCACGC
GCTGGTTCCATGCGCGGCGCGGCCTGATCATGGGCATCCTGACCGCGAGCACGGCCACCGGCCAGCTCGTGTTCCTGCCG
ATGCTCGCGGCGATCGCGCAGCACCACGGCTGGCGGCCGGTCGTGCTGGTCGTGGCGGCGGCCGCCGCGATCGTGATTCC
GCTCGTGGCGTTCCTGCTGCCCGAGCGGCCGGCCGACCTGCAGCTGCGCCCGTACGGCGAGCCGGCCGATGCGCCGCCGG
CGCCCGAGGCGACGAAGGAGAACCCGCTCGCGGTCGCGTTCCGTACGCTGCTGACCGCGAGCCGTTCGCGCGATTTCTGG
CTGCTGTTCTTCAGCTTCTTCATCTGCGGTGCGAGCACCAACGGTTATGTCGGCACGCACCTGATCGCGATGTGCAGCGA
CTACGGGATGACCGAAGTGCAGGGCGCATCGCTGCTCGCGGCGATGGGGGTGTTCGACCTGTTCGGCACGACGCTGTCGG
GCTGGCTGTCCGACCGTTACGACAATCGCGTGCTGCTGTTCTGGTACTACGGGCTGCGCGGGCTGTCGCTGATCTACCTG
CCGCACGCGTTCGGGATCGATTTCTTCGGGCTGCCGCTGTTCGCGATGTTCTACGGGCTCGACTGGATCGCGACCGTGCC
GCCGACGGTGCGCCTCGCGACCGACGTGTTCGGCAAGGCCGCGGCGCCGGTCGTATTCGGCTGGATCGTCGCCGGCCACC
AGCTCGGCGCGGCGTTCGCGGCGCTCGGCGCGGGGCTGCTGCGTGCGAGTCTCGGCACTTACACGATCGCGTCGATGATC
TCGGGCGGGTTGTGCATCATCGGTGCGCTGATCGTGCTGCGGATCAACCGCGGCCCGTCGCGCGCAGCCGCGCAGGCGGC
CTGA

Upstream 100 bases:

>100_bases
TCGGCCCGGGTCAGCCGATGCAGCGTGCGGCGGAGGTGGCCTGGCAGGGCGGGCGGCGCGGGTGCGGAGGCACCGGAGCC
GCCAACTGGAGAACGCGAAG

Downstream 100 bases:

>100_bases
GCGCAGCAGTCCGGCCGCCCGGCCGGCCGCGCGGCGGTCGGTCGGGCAACGCACGCACGGAGATTTGCATAGCGCGGGAG
GATCGGGCGCGCATCGGCTC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MNWAVTRIGGRFHYGWLAAAVVFLILLAAAGTRATPSVLMVPLERELGWSRATISLAISVNIALYGLTGPFAAAAMQRFG
LRPTILTALVTMCAGVALSSMMTQSWQMVVIWGLMVGCSSGVVALTLSATFVTRWFHARRGLIMGILTASTATGQLVFLP
MLAAIAQHHGWRPVVLVVAAAAAIVIPLVAFLLPERPADLQLRPYGEPADAPPAPEATKENPLAVAFRTLLTASRSRDFW
LLFFSFFICGASTNGYVGTHLIAMCSDYGMTEVQGASLLAAMGVFDLFGTTLSGWLSDRYDNRVLLFWYYGLRGLSLIYL
PHAFGIDFFGLPLFAMFYGLDWIATVPPTVRLATDVFGKAAAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTIASMI
SGGLCIIGALIVLRINRGPSRAAAQAA

Sequences:

>Translated_427_residues
MNWAVTRIGGRFHYGWLAAAVVFLILLAAAGTRATPSVLMVPLERELGWSRATISLAISVNIALYGLTGPFAAAAMQRFG
LRPTILTALVTMCAGVALSSMMTQSWQMVVIWGLMVGCSSGVVALTLSATFVTRWFHARRGLIMGILTASTATGQLVFLP
MLAAIAQHHGWRPVVLVVAAAAAIVIPLVAFLLPERPADLQLRPYGEPADAPPAPEATKENPLAVAFRTLLTASRSRDFW
LLFFSFFICGASTNGYVGTHLIAMCSDYGMTEVQGASLLAAMGVFDLFGTTLSGWLSDRYDNRVLLFWYYGLRGLSLIYL
PHAFGIDFFGLPLFAMFYGLDWIATVPPTVRLATDVFGKAAAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTIASMI
SGGLCIIGALIVLRINRGPSRAAAQAA
>Mature_427_residues
MNWAVTRIGGRFHYGWLAAAVVFLILLAAAGTRATPSVLMVPLERELGWSRATISLAISVNIALYGLTGPFAAAAMQRFG
LRPTILTALVTMCAGVALSSMMTQSWQMVVIWGLMVGCSSGVVALTLSATFVTRWFHARRGLIMGILTASTATGQLVFLP
MLAAIAQHHGWRPVVLVVAAAAAIVIPLVAFLLPERPADLQLRPYGEPADAPPAPEATKENPLAVAFRTLLTASRSRDFW
LLFFSFFICGASTNGYVGTHLIAMCSDYGMTEVQGASLLAAMGVFDLFGTTLSGWLSDRYDNRVLLFWYYGLRGLSLIYL
PHAFGIDFFGLPLFAMFYGLDWIATVPPTVRLATDVFGKAAAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTIASMI
SGGLCIIGALIVLRINRGPSRAAAQAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Caenorhabditis elegans, GI17550316, Length=231, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45496; Mature: 45496

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50850 MFS ; PS00283 SOYBEAN_KUNITZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWAVTRIGGRFHYGWLAAAVVFLILLAAAGTRATPSVLMVPLERELGWSRATISLAISV
CCEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCEEEEEEEEEE
NIALYGLTGPFAAAAMQRFGLRPTILTALVTMCAGVALSSMMTQSWQMVVIWGLMVGCSS
EEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
GVVALTLSATFVTRWFHARRGLIMGILTASTATGQLVFLPMLAAIAQHHGWRPVVLVVAA
CEEEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
AAAIVIPLVAFLLPERPADLQLRPYGEPADAPPAPEATKENPLAVAFRTLLTASRSRDFW
HHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH
LLFFSFFICGASTNGYVGTHLIAMCSDYGMTEVQGASLLAAMGVFDLFGTTLSGWLSDRY
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
DNRVLLFWYYGLRGLSLIYLPHAFGIDFFGLPLFAMFYGLDWIATVPPTVRLATDVFGKA
CCEEEEEEEECCCCCEEEEECHHHCCCHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHCCH
AAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTIASMISGGLCIIGALIVLRINRGPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCC
RAAAQAA
CHHHCCC
>Mature Secondary Structure
MNWAVTRIGGRFHYGWLAAAVVFLILLAAAGTRATPSVLMVPLERELGWSRATISLAISV
CCEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCEEEEEEEEEE
NIALYGLTGPFAAAAMQRFGLRPTILTALVTMCAGVALSSMMTQSWQMVVIWGLMVGCSS
EEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
GVVALTLSATFVTRWFHARRGLIMGILTASTATGQLVFLPMLAAIAQHHGWRPVVLVVAA
CEEEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
AAAIVIPLVAFLLPERPADLQLRPYGEPADAPPAPEATKENPLAVAFRTLLTASRSRDFW
HHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH
LLFFSFFICGASTNGYVGTHLIAMCSDYGMTEVQGASLLAAMGVFDLFGTTLSGWLSDRY
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
DNRVLLFWYYGLRGLSLIYLPHAFGIDFFGLPLFAMFYGLDWIATVPPTVRLATDVFGKA
CCEEEEEEEECCCCCEEEEECHHHCCCHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHCCH
AAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTIASMISGGLCIIGALIVLRINRGPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCC
RAAAQAA
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]