| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065065
Identifier: 78065065
GI number: 78065065
Start: 462209
End: 462814
Strand: Direct
Name: 78065065
Synonym: Bcep18194_A3589
Alternate gene names: NA
Gene position: 462209-462814 (Clockwise)
Preceding gene: 78065064
Following gene: 78065066
Centisome position: 12.51
GC content: 67.99
Gene sequence:
>606_bases ATGTCCGTCAAACCTGCTCCCACCACTGTTTCGATTCACGATCTGATCGCGGGCCGCTGGAGCCCGCGCGCGTACTCGGA TGAAGCCGTCAGCGCCGGTGATCTGCATGCGGTGCTCGAAGCCGCCCGCTGGGCGCCGTCTGCCTATAACGCGCAGCCGT GGCGCTTCATCGTATTCGACCGCACGCAGGACGAAGACGCATTCAAGCACGCGTTCGCGACGCTGGTGCCGTTCAACCAG GGCTGGAATGCGCCGGCGCCCGTGCTGATCGCGGTGACCGCGCACACGCTCACGCCGAAGGGTGAACCGGCCCCCACCGC GCTGTACGACGCGGGCGCCGCCGCGATGTCGCTGGTGCTGCAGGCGCACGCGCTGGGCCTGGCCGCCCACCAGATGAGCG GCTTCGACGCGAAGGCGTTCCGTGACGCGTTCGCGATTCCGGCGGACGTCGCGATTCCGGCGATCATCTCGCTCGGTCAC TACGGCAACGTCGACAAGCTCGATCCGGTGCTGCGCGATCGCGAGAAGGCGCCGCGCACGCGCCATGCAATCGGCGAGGT CGTCTATGCGGGCGCGTGGAAGAAGGGTTTCGACGCGGCAGCCTGA
Upstream 100 bases:
>100_bases TTGCATAGCGCGGGAGGATCGGGCGCGCATCGGCTCAAGCGAGTATGCTTGCGGTTCGCCGGGCGTTCGCGCCCCTTCAT CGATGTCAGCGAGGAACCGC
Downstream 100 bases:
>100_bases CCTGTCAGGCGGACGGGCTGCCGCGCGCATCCCGCCCGCGTGTTTCCCCCGGCGCGCCAGGCCGCGCGCCGTCCCGCCGA GGCCCGTTGCGCGGCACCGG
Product: nitroreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSVKPAPTTVSIHDLIAGRWSPRAYSDEAVSAGDLHAVLEAARWAPSAYNAQPWRFIVFDRTQDEDAFKHAFATLVPFNQ GWNAPAPVLIAVTAHTLTPKGEPAPTALYDAGAAAMSLVLQAHALGLAAHQMSGFDAKAFRDAFAIPADVAIPAIISLGH YGNVDKLDPVLRDREKAPRTRHAIGEVVYAGAWKKGFDAAA
Sequences:
>Translated_201_residues MSVKPAPTTVSIHDLIAGRWSPRAYSDEAVSAGDLHAVLEAARWAPSAYNAQPWRFIVFDRTQDEDAFKHAFATLVPFNQ GWNAPAPVLIAVTAHTLTPKGEPAPTALYDAGAAAMSLVLQAHALGLAAHQMSGFDAKAFRDAFAIPADVAIPAIISLGH YGNVDKLDPVLRDREKAPRTRHAIGEVVYAGAWKKGFDAAA >Mature_200_residues SVKPAPTTVSIHDLIAGRWSPRAYSDEAVSAGDLHAVLEAARWAPSAYNAQPWRFIVFDRTQDEDAFKHAFATLVPFNQG WNAPAPVLIAVTAHTLTPKGEPAPTALYDAGAAAMSLVLQAHALGLAAHQMSGFDAKAFRDAFAIPADVAIPAIISLGHY GNVDKLDPVLRDREKAPRTRHAIGEVVYAGAWKKGFDAAA
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: NA
Molecular weight: Translated: 21461; Mature: 21330
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKPAPTTVSIHDLIAGRWSPRAYSDEAVSAGDLHAVLEAARWAPSAYNAQPWRFIVFD CCCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEE RTQDEDAFKHAFATLVPFNQGWNAPAPVLIAVTAHTLTPKGEPAPTALYDAGAAAMSLVL CCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHH QAHALGLAAHQMSGFDAKAFRDAFAIPADVAIPAIISLGHYGNVDKLDPVLRDREKAPRT HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHH RHAIGEVVYAGAWKKGFDAAA HHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SVKPAPTTVSIHDLIAGRWSPRAYSDEAVSAGDLHAVLEAARWAPSAYNAQPWRFIVFD CCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEE RTQDEDAFKHAFATLVPFNQGWNAPAPVLIAVTAHTLTPKGEPAPTALYDAGAAAMSLVL CCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHH QAHALGLAAHQMSGFDAKAFRDAFAIPADVAIPAIISLGHYGNVDKLDPVLRDREKAPRT HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHH RHAIGEVVYAGAWKKGFDAAA HHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]