| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065044
Identifier: 78065044
GI number: 78065044
Start: 437578
End: 439014
Strand: Direct
Name: 78065044
Synonym: Bcep18194_A3568
Alternate gene names: NA
Gene position: 437578-439014 (Clockwise)
Preceding gene: 78065043
Following gene: 78065045
Centisome position: 11.85
GC content: 51.64
Gene sequence:
>1437_bases ATGGGCAGGCCGCTTGTTCAGCATGATGTTTGTATTGATTTGCCGGGGGAGCCGATCAGTTGCTGGGCCGAATCGGATGT GACGGTGTTGCTGCGCAAGCATCGTGACGTCATCTTTGAAATTAGTGTCAAGAAAGACGCGACTTACACGCTTGAGGCCG ATAAAGACTGGTTTTATGACGTCGGCGTGAAGAAGCGTGTCCAGAAAGGGCAGTTTCACGACGGGCAGCGGTATCACATT TGGGTGGGGCGTGATTTCAAAGGGAATTTGCTGCTGAAATCGAATGGAAAGCTGGTGCGCAGTTATTCCATGATCGACTT CGATACGCTTGGCGGAAATTCCGATCCGAAGGCAAAGCCGGAGCCGATAATCATCGCGATCGGCGGATTTCCCGGCGCAG CTTCAAGTGGTCCGCGCGTACCATCCGGCGTTAATAATGTATTTGCCAACCCTGCGCCGTTGGTCTGTCGTAATACCGAC GGAAACCTGCCGGGTAATGCCTGGTGGGGGCAATTGACGCCTTTGAATTTCAAATATGGAGAAGTGGCGCCGGAGTTTTT GTTTCCCGCTTCTTCTGGTCCGTTGACTCAGCAGAATGTCGACGAAAGTCTGATTGTTCACATCTTCGAGGTGACGCTTG AACGGGCTCCAGCGGAAGTGTGGCGATTGGCTCAGGAGGGTGGGCCGCCGACGGCACTTAAAATTGATGACAAAGAAAAG GTAATGACGCGAAACTGGATTATCAGTCAATTTGCCGGGGGATTGGCTTATGCGAAGGATAATTGGTCTGATTTACGTGA GCTGTTCAATAGAAAATTCGTGTTCATGTCCGTGAAGCACCCGAAACTCGGGATCAAGTATTATTTGGCCTTCAAGGGAA ATAGTTCGTTGAGGAAGATGATCACGGAGACTGTCTATAAATTAAAAAGCACAAAAATAATGGCGATCACGGCCGGCGCG GTCGAGGGCATGGCAGAGACTGCAAGCGCATCGGCGCAGGCGTGGAAGGGAGCATTCAAAGGAGCTGGTGGCATTGCTTT CGTGCTGACCATCGGGCTGGACGTGGCTGAGTGGTATCACGATTATGAGCAAGTAGACGCAAACGGACATCGAGGGAGAG GTCTGGCTGATCTCGTCGCCAAGGTCGGGATTGACATTGCTGCCGCTGGGGTCGCATCCATACTCGGCGCGGTTGCCTAT TATCTGATTACGACCGCACTCACTGCGGTGGGCGTTGTGATCGGTGGCTGGGTTGTAGGTGCGGTTGCCGTTCTCGTGGT GGGCGTGTCTGCGTTTTTCTTTTATGTGCTGGGTGTTGCCGATAATCACTATTCCTATACTCAGAAGGCGGCCAAGTTTA TTCGAAAGGCAGCGAAGTATCTGGAGGAGAATTATCCGAAGGATTATAATGGCTACCCAATGATTGTGACATATTGA
Upstream 100 bases:
>100_bases GAGCATAGCGTCGCGCTCGACGCGGAAGGCCGGGCGGAATTGAAGAACATCGATTTTGACGAGTTCGTGGCCAGCCAGGT CAAACGGACGGGAGAGTGAA
Downstream 100 bases:
>100_bases GATGATGGAAGCGCGAGAATTGTCGGGTCGGTTTGATGCACTTTTCAAGGTAAATCTGGGATTTGGTTTATTTTTGATTG GGTGTGCCTTCATCCTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MGRPLVQHDVCIDLPGEPISCWAESDVTVLLRKHRDVIFEISVKKDATYTLEADKDWFYDVGVKKRVQKGQFHDGQRYHI WVGRDFKGNLLLKSNGKLVRSYSMIDFDTLGGNSDPKAKPEPIIIAIGGFPGAASSGPRVPSGVNNVFANPAPLVCRNTD GNLPGNAWWGQLTPLNFKYGEVAPEFLFPASSGPLTQQNVDESLIVHIFEVTLERAPAEVWRLAQEGGPPTALKIDDKEK VMTRNWIISQFAGGLAYAKDNWSDLRELFNRKFVFMSVKHPKLGIKYYLAFKGNSSLRKMITETVYKLKSTKIMAITAGA VEGMAETASASAQAWKGAFKGAGGIAFVLTIGLDVAEWYHDYEQVDANGHRGRGLADLVAKVGIDIAAAGVASILGAVAY YLITTALTAVGVVIGGWVVGAVAVLVVGVSAFFFYVLGVADNHYSYTQKAAKFIRKAAKYLEENYPKDYNGYPMIVTY
Sequences:
>Translated_478_residues MGRPLVQHDVCIDLPGEPISCWAESDVTVLLRKHRDVIFEISVKKDATYTLEADKDWFYDVGVKKRVQKGQFHDGQRYHI WVGRDFKGNLLLKSNGKLVRSYSMIDFDTLGGNSDPKAKPEPIIIAIGGFPGAASSGPRVPSGVNNVFANPAPLVCRNTD GNLPGNAWWGQLTPLNFKYGEVAPEFLFPASSGPLTQQNVDESLIVHIFEVTLERAPAEVWRLAQEGGPPTALKIDDKEK VMTRNWIISQFAGGLAYAKDNWSDLRELFNRKFVFMSVKHPKLGIKYYLAFKGNSSLRKMITETVYKLKSTKIMAITAGA VEGMAETASASAQAWKGAFKGAGGIAFVLTIGLDVAEWYHDYEQVDANGHRGRGLADLVAKVGIDIAAAGVASILGAVAY YLITTALTAVGVVIGGWVVGAVAVLVVGVSAFFFYVLGVADNHYSYTQKAAKFIRKAAKYLEENYPKDYNGYPMIVTY >Mature_477_residues GRPLVQHDVCIDLPGEPISCWAESDVTVLLRKHRDVIFEISVKKDATYTLEADKDWFYDVGVKKRVQKGQFHDGQRYHIW VGRDFKGNLLLKSNGKLVRSYSMIDFDTLGGNSDPKAKPEPIIIAIGGFPGAASSGPRVPSGVNNVFANPAPLVCRNTDG NLPGNAWWGQLTPLNFKYGEVAPEFLFPASSGPLTQQNVDESLIVHIFEVTLERAPAEVWRLAQEGGPPTALKIDDKEKV MTRNWIISQFAGGLAYAKDNWSDLRELFNRKFVFMSVKHPKLGIKYYLAFKGNSSLRKMITETVYKLKSTKIMAITAGAV EGMAETASASAQAWKGAFKGAGGIAFVLTIGLDVAEWYHDYEQVDANGHRGRGLADLVAKVGIDIAAAGVASILGAVAYY LITTALTAVGVVIGGWVVGAVAVLVVGVSAFFFYVLGVADNHYSYTQKAAKFIRKAAKYLEENYPKDYNGYPMIVTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52319; Mature: 52187
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRPLVQHDVCIDLPGEPISCWAESDVTVLLRKHRDVIFEISVKKDATYTLEADKDWFYD CCCCCCCCCEEEECCCCCCEEECCCCHHHHEECCCCEEEEEEECCCCEEEEECCCCEEEE VGVKKRVQKGQFHDGQRYHIWVGRDFKGNLLLKSNGKLVRSYSMIDFDTLGGNSDPKAKP CCHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCC EPIIIAIGGFPGAASSGPRVPSGVNNVFANPAPLVCRNTDGNLPGNAWWGQLTPLNFKYG CCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC EVAPEFLFPASSGPLTQQNVDESLIVHIFEVTLERAPAEVWRLAQEGGPPTALKIDDKEK CCCHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEECCHHH VMTRNWIISQFAGGLAYAKDNWSDLRELFNRKFVFMSVKHPKLGIKYYLAFKGNSSLRKM HHHHHHHHHHHCCCEEECCCCHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCHHHHHH ITETVYKLKSTKIMAITAGAVEGMAETASASAQAWKGAFKGAGGIAFVLTIGLDVAEWYH HHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHH DYEQVDANGHRGRGLADLVAKVGIDIAAAGVASILGAVAYYLITTALTAVGVVIGGWVVG HHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAVLVVGVSAFFFYVLGVADNHYSYTQKAAKFIRKAAKYLEENYPKDYNGYPMIVTY HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC >Mature Secondary Structure GRPLVQHDVCIDLPGEPISCWAESDVTVLLRKHRDVIFEISVKKDATYTLEADKDWFYD CCCCCCCCEEEECCCCCCEEECCCCHHHHEECCCCEEEEEEECCCCEEEEECCCCEEEE VGVKKRVQKGQFHDGQRYHIWVGRDFKGNLLLKSNGKLVRSYSMIDFDTLGGNSDPKAKP CCHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCC EPIIIAIGGFPGAASSGPRVPSGVNNVFANPAPLVCRNTDGNLPGNAWWGQLTPLNFKYG CCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC EVAPEFLFPASSGPLTQQNVDESLIVHIFEVTLERAPAEVWRLAQEGGPPTALKIDDKEK CCCHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEECCHHH VMTRNWIISQFAGGLAYAKDNWSDLRELFNRKFVFMSVKHPKLGIKYYLAFKGNSSLRKM HHHHHHHHHHHCCCEEECCCCHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCHHHHHH ITETVYKLKSTKIMAITAGAVEGMAETASASAQAWKGAFKGAGGIAFVLTIGLDVAEWYH HHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHH DYEQVDANGHRGRGLADLVAKVGIDIAAAGVASILGAVAYYLITTALTAVGVVIGGWVVG HHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAVLVVGVSAFFFYVLGVADNHYSYTQKAAKFIRKAAKYLEENYPKDYNGYPMIVTY HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA