Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

Click here to switch to the map view.

The map label for this gene is 78065043

Identifier: 78065043

GI number: 78065043

Start: 434898

End: 437576

Strand: Direct

Name: 78065043

Synonym: Bcep18194_A3567

Alternate gene names: NA

Gene position: 434898-437576 (Clockwise)

Preceding gene: 78065042

Following gene: 78065044

Centisome position: 11.77

GC content: 65.1

Gene sequence:

>2679_bases
ATGAACCTGACCGAACTGGCACAGGCGATTCGCGGTGGCCTGATTCAGCAGGATCGCCTGCTGAAGACGGACATCCCGTC
GCTGCCGAACAACGCGCTGGTGCCGCGCCGGGCCGTGATCTGTTCCGAACTGGGGCGCGACTTCAGCGTGGCGCTCGACC
TCGTGTCGACCGCCAGCGACATCGAGCTCAAGACGCTGATCGCGCAGCCGATGACGGTGTGGATCCAGCAGGCCGACCAG
TCGTACCTCCCGATCAACGGCTATGTCCATACGGCGCGCCGGCTCGGCACGGACGGCAGCCTGTCGGGCTACCAGTTGAC
CTTCGCGTCGTGGATGCACTTTCTCAAGTTCCGCAGCGACATGCGGTACTGGCAGGACAAGCCGGTCGACGCGATCCTGG
CCGACGTGTTCGATACGCATCCGCAGGCCAAGGGGCGCTATCAGTTTGCGCTGTCGAAACCGCTGCCGTCGCGGTCCTAC
TGCCGCCAGAGCGAAACCGACTGGAACTTCGTGCATCGCCTGATGGAGGACGAAGGGCTGTTCGGCTTCTGGCGGCACGC
CGGGGACGGCAGCGCGCACACGCTCGTCGTGACCGACGACCTGCACGCGCTCGACGAACTGGCGCCGAATTCCGTCCGGT
TCGACCGTTCGGGAGCCGGGAGCGAAGCCACCGGATTCACGCAGTGGGCCGCGTCGCGCACGTTGCAGAGTTCGCAGCAC
ACGACGCGCACGTTCGATTACAAGTCGCCGTCGACGGCCGGCAATCCGAACGGCACGACGTTGCCCACGAAGGCCGGCCA
GGGCGATCTGCCGGGCCAGATGGAAGTCTACGAATACACCGGCGCATACACGTATGCGGGGCAGGATCGCGGCGAGCATC
TGTCGAAGATTCGCCTTGAGCAATGGGAGTCGCGCGCGAAGCGCTTCTTCGGCGTGGGCGGCGTGCGCGGGATCGACGCG
GGGCGGCGCTTCACGCTGGCGGATCATCCCGAGCACGATCGCGATTCGGCGCAGGACCGGGAATTCGCGGCCTTGAAGGT
GTCGCGGTACATCGAGAACAACCTGCCGATCTCGGACCACGAAGCGAACTTTCCGCACAGCCTGCAGGCGCGGCTCGCGG
AGGCGAAAGCCGGTCACGGTGCGGCGGTTGCGTTCGAAGTCGGTCATGACGACGGTTCGGCCGGGTTCTATCTCGTCGAG
GTCGAAGCGCAACGCGCGGCGGTGCCGTATCGCAGCCCGTTCGAGCACAAGAAGCCCGTGATGCAGCTCGAGACGGCCGT
CGTCGTCGGGCCGAAGGGCGAGGAGGTCTATACGGACGAGCTGAACCGGATCAAGGTCATGTTCGTCTGGGACCGGCAGA
ACGGGGGCACCGAAACCGCGTCGTGCTGGGTGCGCGTCGTGCAGTCGGATACCGGCGGCGGCTATGGCGGCGTGCATATT
CCGCGGATCGGCGAGGAAGTGCTGATCGGCTATATCGGCGGCGACTGCGACCGGCCGATCGTCATGCATCGCGTCTACAA
CGGGGCGACCAAGCCGCAGTGGCATAGCGACGGCATCCTGTCGGGCTTTCGGTCGAAGGAGTATGCGGGGTCCGGGCACA
ACGAGATGGTCCTCGACGATGCGACCGGCCAGAACCGTACGCGACTGTTCAGCAGCAGCGCGAATTCGCTGCTTCACCTG
GGCTACCTGATCGAACAGAACGGCAACACGCGCGGCGCGTATCTCGGTTCGGGGTTCGACCTGCGCACGGATACGTACGG
CGCCGTGCGCGCCGGGCAGGGGCTTTACGTGACGACGCATCCGAAAGAGGTGAACAGCCAGCCGCTCGATGCGAGCGAAG
CGCAGGGGCAACTCACGGATGCGGACGGGCTGCTGGAATCGATGTCGCAGGCGAGTGAAATGCATCAGGCCGAAAGCCTC
GGCCCCGGTCACGATGCGTTGAAGCAGTTCGCGGAAGCCACGAAGAACAGTGTTGCGGGGGCTTCGTCGGGCGGCAGGAC
CTCGGGCGGCGGAACGGGCGACGCGAATGTGTTCAAGGAGCCGGTGATGCTGTTCGCGAGCCCGGCGGGGATCGGGATGG
CGTCGCAGCAGAGCGTGCACGTGGCAGCGGACCGGCATGTGAACCTTGTCAGCGGTCAAAGCACGCATCTCACGAGCGGC
AAGTCGCTGGTGGCGAGCGTCAAGGACAAGCTCAGCCTGTTCGTGCAGAACGCGGGGATGAAGCTCTTTGCCGGCAAGGG
GCCGGTCGAGATCCAGGCCCACAGCGACAACGTCGAGATGATTGCGCAGAAGGCGATCAAGGTGTTGTCGGCGACGGCAT
CGATCGAAGGCGTCGCGAAGCAGGAGATCCTGCTGACGGCGGGCGGTGCGTATATCCGGATCAAGGGCGGCAACATCGAG
ATTCACGCGCCGGGCCAGATCGACGTGAAGGGCGCGCAGCACGCCTTCAGCGGTCCGACGAGCATGCACAAGACGTTCAA
GACGGAAGGCCGCAAGGCGGACATGCGGATTCGCTATGTCGACGCCGACGGCAACGTGCCGCACGGGGAGCCGATCAAGT
TCGCGACCGAGGACGGGACCGAGCATAGCGTCGCGCTCGACGCGGAAGGCCGGGCGGAATTGAAGAACATCGATTTTGAC
GAGTTCGTGGCCAGCCAGGTCAAACGGACGGGAGAGTGA

Upstream 100 bases:

>100_bases
TGCTGGGCGTGAGGCCTGACGAGCAGTCGTAGGCGACGGGCATTTGACCTGAGAGCGCGGGTCCGGCGGGCCCGCGGCCA
ACAAGAACGTGGATTGACGC

Downstream 100 bases:

>100_bases
AATGGGCAGGCCGCTTGTTCAGCATGATGTTTGTATTGATTTGCCGGGGGAGCCGATCAGTTGCTGGGCCGAATCGGATG
TGACGGTGTTGCTGCGCAAG

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs-Family Protein; Rhs Element Vgr Family; VGR-Like Protein; VGR-Related Type VI Secretion System Protein; VgrG Protein; Rhs Element Vgr Related Protein; Vgr Related Protein; Replication/Virulence Associated Protein; Rhs Family Protein; Conserved Hypothethical Protein; Rhs Element Vgr-Related Protein; Vgr Protein; Type VI Secretion System VgrG Family Protein; VgrG Family T6SS G

Number of amino acids: Translated: 892; Mature: 892

Protein sequence:

>892_residues
MNLTELAQAIRGGLIQQDRLLKTDIPSLPNNALVPRRAVICSELGRDFSVALDLVSTASDIELKTLIAQPMTVWIQQADQ
SYLPINGYVHTARRLGTDGSLSGYQLTFASWMHFLKFRSDMRYWQDKPVDAILADVFDTHPQAKGRYQFALSKPLPSRSY
CRQSETDWNFVHRLMEDEGLFGFWRHAGDGSAHTLVVTDDLHALDELAPNSVRFDRSGAGSEATGFTQWAASRTLQSSQH
TTRTFDYKSPSTAGNPNGTTLPTKAGQGDLPGQMEVYEYTGAYTYAGQDRGEHLSKIRLEQWESRAKRFFGVGGVRGIDA
GRRFTLADHPEHDRDSAQDREFAALKVSRYIENNLPISDHEANFPHSLQARLAEAKAGHGAAVAFEVGHDDGSAGFYLVE
VEAQRAAVPYRSPFEHKKPVMQLETAVVVGPKGEEVYTDELNRIKVMFVWDRQNGGTETASCWVRVVQSDTGGGYGGVHI
PRIGEEVLIGYIGGDCDRPIVMHRVYNGATKPQWHSDGILSGFRSKEYAGSGHNEMVLDDATGQNRTRLFSSSANSLLHL
GYLIEQNGNTRGAYLGSGFDLRTDTYGAVRAGQGLYVTTHPKEVNSQPLDASEAQGQLTDADGLLESMSQASEMHQAESL
GPGHDALKQFAEATKNSVAGASSGGRTSGGGTGDANVFKEPVMLFASPAGIGMASQQSVHVAADRHVNLVSGQSTHLTSG
KSLVASVKDKLSLFVQNAGMKLFAGKGPVEIQAHSDNVEMIAQKAIKVLSATASIEGVAKQEILLTAGGAYIRIKGGNIE
IHAPGQIDVKGAQHAFSGPTSMHKTFKTEGRKADMRIRYVDADGNVPHGEPIKFATEDGTEHSVALDAEGRAELKNIDFD
EFVASQVKRTGE

Sequences:

>Translated_892_residues
MNLTELAQAIRGGLIQQDRLLKTDIPSLPNNALVPRRAVICSELGRDFSVALDLVSTASDIELKTLIAQPMTVWIQQADQ
SYLPINGYVHTARRLGTDGSLSGYQLTFASWMHFLKFRSDMRYWQDKPVDAILADVFDTHPQAKGRYQFALSKPLPSRSY
CRQSETDWNFVHRLMEDEGLFGFWRHAGDGSAHTLVVTDDLHALDELAPNSVRFDRSGAGSEATGFTQWAASRTLQSSQH
TTRTFDYKSPSTAGNPNGTTLPTKAGQGDLPGQMEVYEYTGAYTYAGQDRGEHLSKIRLEQWESRAKRFFGVGGVRGIDA
GRRFTLADHPEHDRDSAQDREFAALKVSRYIENNLPISDHEANFPHSLQARLAEAKAGHGAAVAFEVGHDDGSAGFYLVE
VEAQRAAVPYRSPFEHKKPVMQLETAVVVGPKGEEVYTDELNRIKVMFVWDRQNGGTETASCWVRVVQSDTGGGYGGVHI
PRIGEEVLIGYIGGDCDRPIVMHRVYNGATKPQWHSDGILSGFRSKEYAGSGHNEMVLDDATGQNRTRLFSSSANSLLHL
GYLIEQNGNTRGAYLGSGFDLRTDTYGAVRAGQGLYVTTHPKEVNSQPLDASEAQGQLTDADGLLESMSQASEMHQAESL
GPGHDALKQFAEATKNSVAGASSGGRTSGGGTGDANVFKEPVMLFASPAGIGMASQQSVHVAADRHVNLVSGQSTHLTSG
KSLVASVKDKLSLFVQNAGMKLFAGKGPVEIQAHSDNVEMIAQKAIKVLSATASIEGVAKQEILLTAGGAYIRIKGGNIE
IHAPGQIDVKGAQHAFSGPTSMHKTFKTEGRKADMRIRYVDADGNVPHGEPIKFATEDGTEHSVALDAEGRAELKNIDFD
EFVASQVKRTGE
>Mature_892_residues
MNLTELAQAIRGGLIQQDRLLKTDIPSLPNNALVPRRAVICSELGRDFSVALDLVSTASDIELKTLIAQPMTVWIQQADQ
SYLPINGYVHTARRLGTDGSLSGYQLTFASWMHFLKFRSDMRYWQDKPVDAILADVFDTHPQAKGRYQFALSKPLPSRSY
CRQSETDWNFVHRLMEDEGLFGFWRHAGDGSAHTLVVTDDLHALDELAPNSVRFDRSGAGSEATGFTQWAASRTLQSSQH
TTRTFDYKSPSTAGNPNGTTLPTKAGQGDLPGQMEVYEYTGAYTYAGQDRGEHLSKIRLEQWESRAKRFFGVGGVRGIDA
GRRFTLADHPEHDRDSAQDREFAALKVSRYIENNLPISDHEANFPHSLQARLAEAKAGHGAAVAFEVGHDDGSAGFYLVE
VEAQRAAVPYRSPFEHKKPVMQLETAVVVGPKGEEVYTDELNRIKVMFVWDRQNGGTETASCWVRVVQSDTGGGYGGVHI
PRIGEEVLIGYIGGDCDRPIVMHRVYNGATKPQWHSDGILSGFRSKEYAGSGHNEMVLDDATGQNRTRLFSSSANSLLHL
GYLIEQNGNTRGAYLGSGFDLRTDTYGAVRAGQGLYVTTHPKEVNSQPLDASEAQGQLTDADGLLESMSQASEMHQAESL
GPGHDALKQFAEATKNSVAGASSGGRTSGGGTGDANVFKEPVMLFASPAGIGMASQQSVHVAADRHVNLVSGQSTHLTSG
KSLVASVKDKLSLFVQNAGMKLFAGKGPVEIQAHSDNVEMIAQKAIKVLSATASIEGVAKQEILLTAGGAYIRIKGGNIE
IHAPGQIDVKGAQHAFSGPTSMHKTFKTEGRKADMRIRYVDADGNVPHGEPIKFATEDGTEHSVALDAEGRAELKNIDFD
EFVASQVKRTGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96851; Mature: 96851

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTELAQAIRGGLIQQDRLLKTDIPSLPNNALVPRRAVICSELGRDFSVALDLVSTASD
CCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHCCCC
IELKTLIAQPMTVWIQQADQSYLPINGYVHTARRLGTDGSLSGYQLTFASWMHFLKFRSD
CCHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH
MRYWQDKPVDAILADVFDTHPQAKGRYQFALSKPLPSRSYCRQSETDWNFVHRLMEDEGL
HHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHCCCC
FGFWRHAGDGSAHTLVVTDDLHALDELAPNSVRFDRSGAGSEATGFTQWAASRTLQSSQH
EEEEEECCCCCEEEEEEECCHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCC
TTRTFDYKSPSTAGNPNGTTLPTKAGQGDLPGQMEVYEYTGAYTYAGQDRGEHLSKIRLE
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHH
QWESRAKRFFGVGGVRGIDAGRRFTLADHPEHDRDSAQDREFAALKVSRYIENNLPISDH
HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
EANFPHSLQARLAEAKAGHGAAVAFEVGHDDGSAGFYLVEVEAQRAAVPYRSPFEHKKPV
CCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHCCCC
MQLETAVVVGPKGEEVYTDELNRIKVMFVWDRQNGGTETASCWVRVVQSDTGGGYGGVHI
EEEEEEEEECCCCCEEECCCCCEEEEEEEEECCCCCCHHHHHHEEEEECCCCCCCCCEEC
PRIGEEVLIGYIGGDCDRPIVMHRVYNGATKPQWHSDGILSGFRSKEYAGSGHNEMVLDD
CCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEC
ATGQNRTRLFSSSANSLLHLGYLIEQNGNTRGAYLGSGFDLRTDTYGAVRAGQGLYVTTH
CCCCCHHEEECCCCCCEEEEEEEEECCCCCCCEEECCCEEECCCCCCCEECCCEEEEEEC
PKEVNSQPLDASEAQGQLTDADGLLESMSQASEMHQAESLGPGHDALKQFAEATKNSVAG
CHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
ASSGGRTSGGGTGDANVFKEPVMLFASPAGIGMASQQSVHVAADRHVNLVSGQSTHLTSG
CCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCEEEECCCEEEEECCCCCEECCC
KSLVASVKDKLSLFVQNAGMKLFAGKGPVEIQAHSDNVEMIAQKAIKVLSATASIEGVAK
HHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC
QEILLTAGGAYIRIKGGNIEIHAPGQIDVKGAQHAFSGPTSMHKTFKTEGRKADMRIRYV
EEEEEEECCEEEEEECCEEEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCEECEEEEEE
DADGNVPHGEPIKFATEDGTEHSVALDAEGRAELKNIDFDEFVASQVKRTGE
CCCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLTELAQAIRGGLIQQDRLLKTDIPSLPNNALVPRRAVICSELGRDFSVALDLVSTASD
CCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHCCCC
IELKTLIAQPMTVWIQQADQSYLPINGYVHTARRLGTDGSLSGYQLTFASWMHFLKFRSD
CCHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH
MRYWQDKPVDAILADVFDTHPQAKGRYQFALSKPLPSRSYCRQSETDWNFVHRLMEDEGL
HHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHCCCC
FGFWRHAGDGSAHTLVVTDDLHALDELAPNSVRFDRSGAGSEATGFTQWAASRTLQSSQH
EEEEEECCCCCEEEEEEECCHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCC
TTRTFDYKSPSTAGNPNGTTLPTKAGQGDLPGQMEVYEYTGAYTYAGQDRGEHLSKIRLE
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHH
QWESRAKRFFGVGGVRGIDAGRRFTLADHPEHDRDSAQDREFAALKVSRYIENNLPISDH
HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
EANFPHSLQARLAEAKAGHGAAVAFEVGHDDGSAGFYLVEVEAQRAAVPYRSPFEHKKPV
CCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHCCCC
MQLETAVVVGPKGEEVYTDELNRIKVMFVWDRQNGGTETASCWVRVVQSDTGGGYGGVHI
EEEEEEEEECCCCCEEECCCCCEEEEEEEEECCCCCCHHHHHHEEEEECCCCCCCCCEEC
PRIGEEVLIGYIGGDCDRPIVMHRVYNGATKPQWHSDGILSGFRSKEYAGSGHNEMVLDD
CCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEC
ATGQNRTRLFSSSANSLLHLGYLIEQNGNTRGAYLGSGFDLRTDTYGAVRAGQGLYVTTH
CCCCCHHEEECCCCCCEEEEEEEEECCCCCCCEEECCCEEECCCCCCCEECCCEEEEEEC
PKEVNSQPLDASEAQGQLTDADGLLESMSQASEMHQAESLGPGHDALKQFAEATKNSVAG
CHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
ASSGGRTSGGGTGDANVFKEPVMLFASPAGIGMASQQSVHVAADRHVNLVSGQSTHLTSG
CCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCEEEECCCEEEEECCCCCEECCC
KSLVASVKDKLSLFVQNAGMKLFAGKGPVEIQAHSDNVEMIAQKAIKVLSATASIEGVAK
HHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC
QEILLTAGGAYIRIKGGNIEIHAPGQIDVKGAQHAFSGPTSMHKTFKTEGRKADMRIRYV
EEEEEEECCEEEEEECCEEEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCEECEEEEEE
DADGNVPHGEPIKFATEDGTEHSVALDAEGRAELKNIDFDEFVASQVKRTGE
CCCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA