| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065043
Identifier: 78065043
GI number: 78065043
Start: 434898
End: 437576
Strand: Direct
Name: 78065043
Synonym: Bcep18194_A3567
Alternate gene names: NA
Gene position: 434898-437576 (Clockwise)
Preceding gene: 78065042
Following gene: 78065044
Centisome position: 11.77
GC content: 65.1
Gene sequence:
>2679_bases ATGAACCTGACCGAACTGGCACAGGCGATTCGCGGTGGCCTGATTCAGCAGGATCGCCTGCTGAAGACGGACATCCCGTC GCTGCCGAACAACGCGCTGGTGCCGCGCCGGGCCGTGATCTGTTCCGAACTGGGGCGCGACTTCAGCGTGGCGCTCGACC TCGTGTCGACCGCCAGCGACATCGAGCTCAAGACGCTGATCGCGCAGCCGATGACGGTGTGGATCCAGCAGGCCGACCAG TCGTACCTCCCGATCAACGGCTATGTCCATACGGCGCGCCGGCTCGGCACGGACGGCAGCCTGTCGGGCTACCAGTTGAC CTTCGCGTCGTGGATGCACTTTCTCAAGTTCCGCAGCGACATGCGGTACTGGCAGGACAAGCCGGTCGACGCGATCCTGG CCGACGTGTTCGATACGCATCCGCAGGCCAAGGGGCGCTATCAGTTTGCGCTGTCGAAACCGCTGCCGTCGCGGTCCTAC TGCCGCCAGAGCGAAACCGACTGGAACTTCGTGCATCGCCTGATGGAGGACGAAGGGCTGTTCGGCTTCTGGCGGCACGC CGGGGACGGCAGCGCGCACACGCTCGTCGTGACCGACGACCTGCACGCGCTCGACGAACTGGCGCCGAATTCCGTCCGGT TCGACCGTTCGGGAGCCGGGAGCGAAGCCACCGGATTCACGCAGTGGGCCGCGTCGCGCACGTTGCAGAGTTCGCAGCAC ACGACGCGCACGTTCGATTACAAGTCGCCGTCGACGGCCGGCAATCCGAACGGCACGACGTTGCCCACGAAGGCCGGCCA GGGCGATCTGCCGGGCCAGATGGAAGTCTACGAATACACCGGCGCATACACGTATGCGGGGCAGGATCGCGGCGAGCATC TGTCGAAGATTCGCCTTGAGCAATGGGAGTCGCGCGCGAAGCGCTTCTTCGGCGTGGGCGGCGTGCGCGGGATCGACGCG GGGCGGCGCTTCACGCTGGCGGATCATCCCGAGCACGATCGCGATTCGGCGCAGGACCGGGAATTCGCGGCCTTGAAGGT GTCGCGGTACATCGAGAACAACCTGCCGATCTCGGACCACGAAGCGAACTTTCCGCACAGCCTGCAGGCGCGGCTCGCGG AGGCGAAAGCCGGTCACGGTGCGGCGGTTGCGTTCGAAGTCGGTCATGACGACGGTTCGGCCGGGTTCTATCTCGTCGAG GTCGAAGCGCAACGCGCGGCGGTGCCGTATCGCAGCCCGTTCGAGCACAAGAAGCCCGTGATGCAGCTCGAGACGGCCGT CGTCGTCGGGCCGAAGGGCGAGGAGGTCTATACGGACGAGCTGAACCGGATCAAGGTCATGTTCGTCTGGGACCGGCAGA ACGGGGGCACCGAAACCGCGTCGTGCTGGGTGCGCGTCGTGCAGTCGGATACCGGCGGCGGCTATGGCGGCGTGCATATT CCGCGGATCGGCGAGGAAGTGCTGATCGGCTATATCGGCGGCGACTGCGACCGGCCGATCGTCATGCATCGCGTCTACAA CGGGGCGACCAAGCCGCAGTGGCATAGCGACGGCATCCTGTCGGGCTTTCGGTCGAAGGAGTATGCGGGGTCCGGGCACA ACGAGATGGTCCTCGACGATGCGACCGGCCAGAACCGTACGCGACTGTTCAGCAGCAGCGCGAATTCGCTGCTTCACCTG GGCTACCTGATCGAACAGAACGGCAACACGCGCGGCGCGTATCTCGGTTCGGGGTTCGACCTGCGCACGGATACGTACGG CGCCGTGCGCGCCGGGCAGGGGCTTTACGTGACGACGCATCCGAAAGAGGTGAACAGCCAGCCGCTCGATGCGAGCGAAG CGCAGGGGCAACTCACGGATGCGGACGGGCTGCTGGAATCGATGTCGCAGGCGAGTGAAATGCATCAGGCCGAAAGCCTC GGCCCCGGTCACGATGCGTTGAAGCAGTTCGCGGAAGCCACGAAGAACAGTGTTGCGGGGGCTTCGTCGGGCGGCAGGAC CTCGGGCGGCGGAACGGGCGACGCGAATGTGTTCAAGGAGCCGGTGATGCTGTTCGCGAGCCCGGCGGGGATCGGGATGG CGTCGCAGCAGAGCGTGCACGTGGCAGCGGACCGGCATGTGAACCTTGTCAGCGGTCAAAGCACGCATCTCACGAGCGGC AAGTCGCTGGTGGCGAGCGTCAAGGACAAGCTCAGCCTGTTCGTGCAGAACGCGGGGATGAAGCTCTTTGCCGGCAAGGG GCCGGTCGAGATCCAGGCCCACAGCGACAACGTCGAGATGATTGCGCAGAAGGCGATCAAGGTGTTGTCGGCGACGGCAT CGATCGAAGGCGTCGCGAAGCAGGAGATCCTGCTGACGGCGGGCGGTGCGTATATCCGGATCAAGGGCGGCAACATCGAG ATTCACGCGCCGGGCCAGATCGACGTGAAGGGCGCGCAGCACGCCTTCAGCGGTCCGACGAGCATGCACAAGACGTTCAA GACGGAAGGCCGCAAGGCGGACATGCGGATTCGCTATGTCGACGCCGACGGCAACGTGCCGCACGGGGAGCCGATCAAGT TCGCGACCGAGGACGGGACCGAGCATAGCGTCGCGCTCGACGCGGAAGGCCGGGCGGAATTGAAGAACATCGATTTTGAC GAGTTCGTGGCCAGCCAGGTCAAACGGACGGGAGAGTGA
Upstream 100 bases:
>100_bases TGCTGGGCGTGAGGCCTGACGAGCAGTCGTAGGCGACGGGCATTTGACCTGAGAGCGCGGGTCCGGCGGGCCCGCGGCCA ACAAGAACGTGGATTGACGC
Downstream 100 bases:
>100_bases AATGGGCAGGCCGCTTGTTCAGCATGATGTTTGTATTGATTTGCCGGGGGAGCCGATCAGTTGCTGGGCCGAATCGGATG TGACGGTGTTGCTGCGCAAG
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs-Family Protein; Rhs Element Vgr Family; VGR-Like Protein; VGR-Related Type VI Secretion System Protein; VgrG Protein; Rhs Element Vgr Related Protein; Vgr Related Protein; Replication/Virulence Associated Protein; Rhs Family Protein; Conserved Hypothethical Protein; Rhs Element Vgr-Related Protein; Vgr Protein; Type VI Secretion System VgrG Family Protein; VgrG Family T6SS G
Number of amino acids: Translated: 892; Mature: 892
Protein sequence:
>892_residues MNLTELAQAIRGGLIQQDRLLKTDIPSLPNNALVPRRAVICSELGRDFSVALDLVSTASDIELKTLIAQPMTVWIQQADQ SYLPINGYVHTARRLGTDGSLSGYQLTFASWMHFLKFRSDMRYWQDKPVDAILADVFDTHPQAKGRYQFALSKPLPSRSY CRQSETDWNFVHRLMEDEGLFGFWRHAGDGSAHTLVVTDDLHALDELAPNSVRFDRSGAGSEATGFTQWAASRTLQSSQH TTRTFDYKSPSTAGNPNGTTLPTKAGQGDLPGQMEVYEYTGAYTYAGQDRGEHLSKIRLEQWESRAKRFFGVGGVRGIDA GRRFTLADHPEHDRDSAQDREFAALKVSRYIENNLPISDHEANFPHSLQARLAEAKAGHGAAVAFEVGHDDGSAGFYLVE VEAQRAAVPYRSPFEHKKPVMQLETAVVVGPKGEEVYTDELNRIKVMFVWDRQNGGTETASCWVRVVQSDTGGGYGGVHI PRIGEEVLIGYIGGDCDRPIVMHRVYNGATKPQWHSDGILSGFRSKEYAGSGHNEMVLDDATGQNRTRLFSSSANSLLHL GYLIEQNGNTRGAYLGSGFDLRTDTYGAVRAGQGLYVTTHPKEVNSQPLDASEAQGQLTDADGLLESMSQASEMHQAESL GPGHDALKQFAEATKNSVAGASSGGRTSGGGTGDANVFKEPVMLFASPAGIGMASQQSVHVAADRHVNLVSGQSTHLTSG KSLVASVKDKLSLFVQNAGMKLFAGKGPVEIQAHSDNVEMIAQKAIKVLSATASIEGVAKQEILLTAGGAYIRIKGGNIE IHAPGQIDVKGAQHAFSGPTSMHKTFKTEGRKADMRIRYVDADGNVPHGEPIKFATEDGTEHSVALDAEGRAELKNIDFD EFVASQVKRTGE
Sequences:
>Translated_892_residues MNLTELAQAIRGGLIQQDRLLKTDIPSLPNNALVPRRAVICSELGRDFSVALDLVSTASDIELKTLIAQPMTVWIQQADQ SYLPINGYVHTARRLGTDGSLSGYQLTFASWMHFLKFRSDMRYWQDKPVDAILADVFDTHPQAKGRYQFALSKPLPSRSY CRQSETDWNFVHRLMEDEGLFGFWRHAGDGSAHTLVVTDDLHALDELAPNSVRFDRSGAGSEATGFTQWAASRTLQSSQH TTRTFDYKSPSTAGNPNGTTLPTKAGQGDLPGQMEVYEYTGAYTYAGQDRGEHLSKIRLEQWESRAKRFFGVGGVRGIDA GRRFTLADHPEHDRDSAQDREFAALKVSRYIENNLPISDHEANFPHSLQARLAEAKAGHGAAVAFEVGHDDGSAGFYLVE VEAQRAAVPYRSPFEHKKPVMQLETAVVVGPKGEEVYTDELNRIKVMFVWDRQNGGTETASCWVRVVQSDTGGGYGGVHI PRIGEEVLIGYIGGDCDRPIVMHRVYNGATKPQWHSDGILSGFRSKEYAGSGHNEMVLDDATGQNRTRLFSSSANSLLHL GYLIEQNGNTRGAYLGSGFDLRTDTYGAVRAGQGLYVTTHPKEVNSQPLDASEAQGQLTDADGLLESMSQASEMHQAESL GPGHDALKQFAEATKNSVAGASSGGRTSGGGTGDANVFKEPVMLFASPAGIGMASQQSVHVAADRHVNLVSGQSTHLTSG KSLVASVKDKLSLFVQNAGMKLFAGKGPVEIQAHSDNVEMIAQKAIKVLSATASIEGVAKQEILLTAGGAYIRIKGGNIE IHAPGQIDVKGAQHAFSGPTSMHKTFKTEGRKADMRIRYVDADGNVPHGEPIKFATEDGTEHSVALDAEGRAELKNIDFD EFVASQVKRTGE >Mature_892_residues MNLTELAQAIRGGLIQQDRLLKTDIPSLPNNALVPRRAVICSELGRDFSVALDLVSTASDIELKTLIAQPMTVWIQQADQ SYLPINGYVHTARRLGTDGSLSGYQLTFASWMHFLKFRSDMRYWQDKPVDAILADVFDTHPQAKGRYQFALSKPLPSRSY CRQSETDWNFVHRLMEDEGLFGFWRHAGDGSAHTLVVTDDLHALDELAPNSVRFDRSGAGSEATGFTQWAASRTLQSSQH TTRTFDYKSPSTAGNPNGTTLPTKAGQGDLPGQMEVYEYTGAYTYAGQDRGEHLSKIRLEQWESRAKRFFGVGGVRGIDA GRRFTLADHPEHDRDSAQDREFAALKVSRYIENNLPISDHEANFPHSLQARLAEAKAGHGAAVAFEVGHDDGSAGFYLVE VEAQRAAVPYRSPFEHKKPVMQLETAVVVGPKGEEVYTDELNRIKVMFVWDRQNGGTETASCWVRVVQSDTGGGYGGVHI PRIGEEVLIGYIGGDCDRPIVMHRVYNGATKPQWHSDGILSGFRSKEYAGSGHNEMVLDDATGQNRTRLFSSSANSLLHL GYLIEQNGNTRGAYLGSGFDLRTDTYGAVRAGQGLYVTTHPKEVNSQPLDASEAQGQLTDADGLLESMSQASEMHQAESL GPGHDALKQFAEATKNSVAGASSGGRTSGGGTGDANVFKEPVMLFASPAGIGMASQQSVHVAADRHVNLVSGQSTHLTSG KSLVASVKDKLSLFVQNAGMKLFAGKGPVEIQAHSDNVEMIAQKAIKVLSATASIEGVAKQEILLTAGGAYIRIKGGNIE IHAPGQIDVKGAQHAFSGPTSMHKTFKTEGRKADMRIRYVDADGNVPHGEPIKFATEDGTEHSVALDAEGRAELKNIDFD EFVASQVKRTGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96851; Mature: 96851
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTELAQAIRGGLIQQDRLLKTDIPSLPNNALVPRRAVICSELGRDFSVALDLVSTASD CCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHCCCC IELKTLIAQPMTVWIQQADQSYLPINGYVHTARRLGTDGSLSGYQLTFASWMHFLKFRSD CCHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH MRYWQDKPVDAILADVFDTHPQAKGRYQFALSKPLPSRSYCRQSETDWNFVHRLMEDEGL HHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHCCCC FGFWRHAGDGSAHTLVVTDDLHALDELAPNSVRFDRSGAGSEATGFTQWAASRTLQSSQH EEEEEECCCCCEEEEEEECCHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCC TTRTFDYKSPSTAGNPNGTTLPTKAGQGDLPGQMEVYEYTGAYTYAGQDRGEHLSKIRLE CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHH QWESRAKRFFGVGGVRGIDAGRRFTLADHPEHDRDSAQDREFAALKVSRYIENNLPISDH HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC EANFPHSLQARLAEAKAGHGAAVAFEVGHDDGSAGFYLVEVEAQRAAVPYRSPFEHKKPV CCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHCCCC MQLETAVVVGPKGEEVYTDELNRIKVMFVWDRQNGGTETASCWVRVVQSDTGGGYGGVHI EEEEEEEEECCCCCEEECCCCCEEEEEEEEECCCCCCHHHHHHEEEEECCCCCCCCCEEC PRIGEEVLIGYIGGDCDRPIVMHRVYNGATKPQWHSDGILSGFRSKEYAGSGHNEMVLDD CCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEC ATGQNRTRLFSSSANSLLHLGYLIEQNGNTRGAYLGSGFDLRTDTYGAVRAGQGLYVTTH CCCCCHHEEECCCCCCEEEEEEEEECCCCCCCEEECCCEEECCCCCCCEECCCEEEEEEC PKEVNSQPLDASEAQGQLTDADGLLESMSQASEMHQAESLGPGHDALKQFAEATKNSVAG CHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC ASSGGRTSGGGTGDANVFKEPVMLFASPAGIGMASQQSVHVAADRHVNLVSGQSTHLTSG CCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCEEEECCCEEEEECCCCCEECCC KSLVASVKDKLSLFVQNAGMKLFAGKGPVEIQAHSDNVEMIAQKAIKVLSATASIEGVAK HHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC QEILLTAGGAYIRIKGGNIEIHAPGQIDVKGAQHAFSGPTSMHKTFKTEGRKADMRIRYV EEEEEEECCEEEEEECCEEEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCEECEEEEEE DADGNVPHGEPIKFATEDGTEHSVALDAEGRAELKNIDFDEFVASQVKRTGE CCCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNLTELAQAIRGGLIQQDRLLKTDIPSLPNNALVPRRAVICSELGRDFSVALDLVSTASD CCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHCCCC IELKTLIAQPMTVWIQQADQSYLPINGYVHTARRLGTDGSLSGYQLTFASWMHFLKFRSD CCHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH MRYWQDKPVDAILADVFDTHPQAKGRYQFALSKPLPSRSYCRQSETDWNFVHRLMEDEGL HHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHCCCC FGFWRHAGDGSAHTLVVTDDLHALDELAPNSVRFDRSGAGSEATGFTQWAASRTLQSSQH EEEEEECCCCCEEEEEEECCHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCC TTRTFDYKSPSTAGNPNGTTLPTKAGQGDLPGQMEVYEYTGAYTYAGQDRGEHLSKIRLE CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHH QWESRAKRFFGVGGVRGIDAGRRFTLADHPEHDRDSAQDREFAALKVSRYIENNLPISDH HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC EANFPHSLQARLAEAKAGHGAAVAFEVGHDDGSAGFYLVEVEAQRAAVPYRSPFEHKKPV CCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHCCCC MQLETAVVVGPKGEEVYTDELNRIKVMFVWDRQNGGTETASCWVRVVQSDTGGGYGGVHI EEEEEEEEECCCCCEEECCCCCEEEEEEEEECCCCCCHHHHHHEEEEECCCCCCCCCEEC PRIGEEVLIGYIGGDCDRPIVMHRVYNGATKPQWHSDGILSGFRSKEYAGSGHNEMVLDD CCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEC ATGQNRTRLFSSSANSLLHLGYLIEQNGNTRGAYLGSGFDLRTDTYGAVRAGQGLYVTTH CCCCCHHEEECCCCCCEEEEEEEEECCCCCCCEEECCCEEECCCCCCCEECCCEEEEEEC PKEVNSQPLDASEAQGQLTDADGLLESMSQASEMHQAESLGPGHDALKQFAEATKNSVAG CHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC ASSGGRTSGGGTGDANVFKEPVMLFASPAGIGMASQQSVHVAADRHVNLVSGQSTHLTSG CCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCEEEECCCEEEEECCCCCEECCC KSLVASVKDKLSLFVQNAGMKLFAGKGPVEIQAHSDNVEMIAQKAIKVLSATASIEGVAK HHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC QEILLTAGGAYIRIKGGNIEIHAPGQIDVKGAQHAFSGPTSMHKTFKTEGRKADMRIRYV EEEEEEECCEEEEEECCEEEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCEECEEEEEE DADGNVPHGEPIKFATEDGTEHSVALDAEGRAELKNIDFDEFVASQVKRTGE CCCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA