| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78064907
Identifier: 78064907
GI number: 78064907
Start: 291501
End: 292772
Strand: Direct
Name: 78064907
Synonym: Bcep18194_A3430
Alternate gene names: NA
Gene position: 291501-292772 (Clockwise)
Preceding gene: 78064898
Following gene: 78064909
Centisome position: 7.89
GC content: 68.87
Gene sequence:
>1272_bases ATGTCATTCCGAAGCAGTATCGCCGCGGCCGTGCTGGGTGCGGTTGTCCTTGTATCGCCGCTTGCGGCGTCGGCCTCGGC CGCGCCGGCCGGATGGGTTGCCGCGTGGGCGACCGCGCTGCAGCCGATTCCCGACCTTGCCGCACCGCCGCCGCTTTATC GCGCACCCGACGTGTCCGGGCGAGCCGTACGCCAGATCGTCTACCCGACTGTGTCGGGGCGCGCCGCGCGGATCCGCGTC AGTAATGCATATGGCCGTACGCCGCTGATCGTCGAGGCGGCGAGCCTCGCGCGCGCCGGCGAAGGGGCGGCACTTGCCGG CGGTGTGGCGGCGCCGGTCCGGTTCGGCGGCAAGGCTTCGGTGACGCTTGGGCCGGGCCAGGAACTTGAAAGCGATCCGG TGGCGATCGACGTGACGGCCGGGCGGCCGTACGCGATCAACCTCCAGATGGGACCGAACCAGCGGATGACGGTCTGGCAC CGCGTGTCGAACCAGTTCAACTATGTGTCTGCACCGGGCGATCACGTGAATGATCCGGGTGCGGCCGCGTTCCGCACCCG CTTTACCCAATATGCATGGGTGACCGAGCTCGCGGTCGAGGCCGGGGCCGCGCACGCCAGCGTTGCCGCGATCGGCGATT CGATCACCGATGGGCTGCGCTCGAGCGTGAACCGGAACCACCGTTGGCCGGACGCATTGGCGCGTCGGCTGACCGCCTCG GGCGTGGAGTCGATCGGCGTCACGAATCTTGGTATCAGCGGGAACCGGCTGCTTAGCGATTCTGCGTGCTACGGCACGTC GCTGGCGTCGCGGTTCGAGCGCGATGCGCTGTCGCGCGCGGGTGTGAAGGCGGCGATCGTGCTGATCGGGATCAATGACA TCAACTTCGCGGCGATGCCGCCGCGCGCGGGGCTCGATTGTGACCACCCGCATACGCAGGTCACCGCTGCATCGCTGATC GACGGCTACCGCCGGCTGATCGAAGCAGCGCATCGTCAGGGTGTGAAGGTTTTCGGTGCGACGCTGACACCGGCCGGGCT GCCGGCGGGGCGCGAAGCGATCCGGCTTGAGGTGAACCGGTGGATCCGGAGCGGTAGCGGGTTCGACGGTGTGGTCGACT TCGATGCGGTGCTGCGCGATCCGGCGCGCCCGAGTGTGCTGCAGCGTCGCTACGATAGCGGCGACGGCATTCACCCGAGC GACGCCGGCTACGCGGCGATGGCCGACGCGGTGCCGGTCGAGCAACTGCAGGCTGCCGTAGGCGGCAAGTGA
Upstream 100 bases:
>100_bases AGGGACGTCGGGGCGCGATCGGGCGGCGTGATGGTGGTCCGGCGCGTGGGGTTCGCGTCTTCTGCGGCACAATGCCCGCT TTCCGACGAGGATTTTGCCG
Downstream 100 bases:
>100_bases CGCACCTCTATATATAGAGGGAAGTGTTGCCGGCGACCGGGATGTCAGCAGCGTCACGCGGCCCGTCGTACCCCAAGCCC CCGTGCGCGTCAGCGCACGG
Product: lipolytic protein
Products: NA
Alternate protein names: Lipolytic Protein G-D-S-L Family; GDSL Family Lipase; G-D-S-L Family Lipolytic Protein; Lipolytic G-D-S-L; SGNH Hydrolase; Lipolytic; GDSL-Like Lipase/Acylhydrolase Family Protein; Lipase/Acylhydrolase; GDSL-Like Lipase/Acylhydrolase; GDSL-Like Lipase/Acylhydrolase Domain Protein; Lipid Hydrolase; GDSL-Like Protein; Lipolytic Protein; Lipolytic G-D-S-L Domain Protein; Esterase; LOW QUALITY PROTEIN Secreted Protein; Lipolytic GDSL Family; Lysophospholipase L1-Like Esterase; GDSL-Like Lipase/Acylhydrolase Exported Protein; Lysophospholipase L1 Or Related Esterase
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MSFRSSIAAAVLGAVVLVSPLAASASAAPAGWVAAWATALQPIPDLAAPPPLYRAPDVSGRAVRQIVYPTVSGRAARIRV SNAYGRTPLIVEAASLARAGEGAALAGGVAAPVRFGGKASVTLGPGQELESDPVAIDVTAGRPYAINLQMGPNQRMTVWH RVSNQFNYVSAPGDHVNDPGAAAFRTRFTQYAWVTELAVEAGAAHASVAAIGDSITDGLRSSVNRNHRWPDALARRLTAS GVESIGVTNLGISGNRLLSDSACYGTSLASRFERDALSRAGVKAAIVLIGINDINFAAMPPRAGLDCDHPHTQVTAASLI DGYRRLIEAAHRQGVKVFGATLTPAGLPAGREAIRLEVNRWIRSGSGFDGVVDFDAVLRDPARPSVLQRRYDSGDGIHPS DAGYAAMADAVPVEQLQAAVGGK
Sequences:
>Translated_423_residues MSFRSSIAAAVLGAVVLVSPLAASASAAPAGWVAAWATALQPIPDLAAPPPLYRAPDVSGRAVRQIVYPTVSGRAARIRV SNAYGRTPLIVEAASLARAGEGAALAGGVAAPVRFGGKASVTLGPGQELESDPVAIDVTAGRPYAINLQMGPNQRMTVWH RVSNQFNYVSAPGDHVNDPGAAAFRTRFTQYAWVTELAVEAGAAHASVAAIGDSITDGLRSSVNRNHRWPDALARRLTAS GVESIGVTNLGISGNRLLSDSACYGTSLASRFERDALSRAGVKAAIVLIGINDINFAAMPPRAGLDCDHPHTQVTAASLI DGYRRLIEAAHRQGVKVFGATLTPAGLPAGREAIRLEVNRWIRSGSGFDGVVDFDAVLRDPARPSVLQRRYDSGDGIHPS DAGYAAMADAVPVEQLQAAVGGK >Mature_422_residues SFRSSIAAAVLGAVVLVSPLAASASAAPAGWVAAWATALQPIPDLAAPPPLYRAPDVSGRAVRQIVYPTVSGRAARIRVS NAYGRTPLIVEAASLARAGEGAALAGGVAAPVRFGGKASVTLGPGQELESDPVAIDVTAGRPYAINLQMGPNQRMTVWHR VSNQFNYVSAPGDHVNDPGAAAFRTRFTQYAWVTELAVEAGAAHASVAAIGDSITDGLRSSVNRNHRWPDALARRLTASG VESIGVTNLGISGNRLLSDSACYGTSLASRFERDALSRAGVKAAIVLIGINDINFAAMPPRAGLDCDHPHTQVTAASLID GYRRLIEAAHRQGVKVFGATLTPAGLPAGREAIRLEVNRWIRSGSGFDGVVDFDAVLRDPARPSVLQRRYDSGDGIHPSD AGYAAMADAVPVEQLQAAVGGK
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43986; Mature: 43855
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFRSSIAAAVLGAVVLVSPLAASASAAPAGWVAAWATALQPIPDLAAPPPLYRAPDVSG CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC RAVRQIVYPTVSGRAARIRVSNAYGRTPLIVEAASLARAGEGAALAGGVAAPVRFGGKAS HHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEHHHHHHCCCCCEECCCCCCCEEECCEEE VTLGPGQELESDPVAIDVTAGRPYAINLQMGPNQRMTVWHRVSNQFNYVSAPGDHVNDPG EEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEHEEECCCCCCEEECCCCCCCCCC AAAFRTRFTQYAWVTELAVEAGAAHASVAAIGDSITDGLRSSVNRNHRWPDALARRLTAS HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GVESIGVTNLGISGNRLLSDSACYGTSLASRFERDALSRAGVKAAIVLIGINDINFAAMP CHHHCCCEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEECC PRAGLDCDHPHTQVTAASLIDGYRRLIEAAHRQGVKVFGATLTPAGLPAGREAIRLEVNR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHH WIRSGSGFDGVVDFDAVLRDPARPSVLQRRYDSGDGIHPSDAGYAAMADAVPVEQLQAAV HHHCCCCCCCEEEHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHH GGK CCC >Mature Secondary Structure SFRSSIAAAVLGAVVLVSPLAASASAAPAGWVAAWATALQPIPDLAAPPPLYRAPDVSG CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC RAVRQIVYPTVSGRAARIRVSNAYGRTPLIVEAASLARAGEGAALAGGVAAPVRFGGKAS HHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEHHHHHHCCCCCEECCCCCCCEEECCEEE VTLGPGQELESDPVAIDVTAGRPYAINLQMGPNQRMTVWHRVSNQFNYVSAPGDHVNDPG EEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEHEEECCCCCCEEECCCCCCCCCC AAAFRTRFTQYAWVTELAVEAGAAHASVAAIGDSITDGLRSSVNRNHRWPDALARRLTAS HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GVESIGVTNLGISGNRLLSDSACYGTSLASRFERDALSRAGVKAAIVLIGINDINFAAMP CHHHCCCEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEECC PRAGLDCDHPHTQVTAASLIDGYRRLIEAAHRQGVKVFGATLTPAGLPAGREAIRLEVNR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHH WIRSGSGFDGVVDFDAVLRDPARPSVLQRRYDSGDGIHPSDAGYAAMADAVPVEQLQAAV HHHCCCCCCCEEEHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHH GGK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA