| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yvlD [H]
Identifier: 78064853
GI number: 78064853
Start: 235520
End: 235873
Strand: Direct
Name: yvlD [H]
Synonym: Bcep18194_A3376
Alternate gene names: 78064853
Gene position: 235520-235873 (Clockwise)
Preceding gene: 78064852
Following gene: 78064854
Centisome position: 6.38
GC content: 61.86
Gene sequence:
>354_bases ATGAGCGTCATCCTCACCTGGGTCATCAACGCGCTCGCGCTGCTGATCATCACGTACCTCGTGCCGTCGATCCACATCAA GAGCTTCGGCACGGCGCTGATCATCGCGGTCGTGCTCGGCCTGATCAACACGGTGATCCGCCCGGTGCTGATCCTGCTGA CGCTGCCCGTCACGATCGTCACGCTCGGGGTGTTCATCCTGGTCGTGAACGCGTTGTGCTTCTGGTTCGCGTCGTCGCTG CTGAAGGGCTTCGAGGTGTCGGGCTTCTGGTCCGCGTTCTTCGGTTCGATCCTGTACAGCATCGTGTCGTGGCTGCTGTC CGCGCTGATCTTCGGTCAGCGCGACATCGGCTGA
Upstream 100 bases:
>100_bases GCGCGCCGGATCGCCGGCTGCCGCGGCGCGCCTTCGGGCACCCGCGGCAGCCGGCGGCGGCCACTGATCGTACCGATCGA CAACCGAACCGGAGCACTCC
Downstream 100 bases:
>100_bases CCTCTTCGAATCATGAAACCGATCGAACTCTCGTTTGAATTCTTCCCGCCGAAAACGGCGGAGGGCGTCGAGAAGCTGCG CGCCACGCGTGCGCAGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSVILTWVINALALLIITYLVPSIHIKSFGTALIIAVVLGLINTVIRPVLILLTLPVTIVTLGVFILVVNALCFWFASSL LKGFEVSGFWSAFFGSILYSIVSWLLSALIFGQRDIG
Sequences:
>Translated_117_residues MSVILTWVINALALLIITYLVPSIHIKSFGTALIIAVVLGLINTVIRPVLILLTLPVTIVTLGVFILVVNALCFWFASSL LKGFEVSGFWSAFFGSILYSIVSWLLSALIFGQRDIG >Mature_116_residues SVILTWVINALALLIITYLVPSIHIKSFGTALIIAVVLGLINTVIRPVLILLTLPVTIVTLGVFILVVNALCFWFASSLL KGFEVSGFWSAFFGSILYSIVSWLLSALIFGQRDIG
Specific function: Unknown
COG id: COG1950
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007165 [H]
Pfam domain/function: PF04020 DUF360 [H]
EC number: NA
Molecular weight: Translated: 12739; Mature: 12608
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVILTWVINALALLIITYLVPSIHIKSFGTALIIAVVLGLINTVIRPVLILLTLPVTIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGVFILVVNALCFWFASSLLKGFEVSGFWSAFFGSILYSIVSWLLSALIFGQRDIG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SVILTWVINALALLIITYLVPSIHIKSFGTALIIAVVLGLINTVIRPVLILLTLPVTIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGVFILVVNALCFWFASSLLKGFEVSGFWSAFFGSILYSIVSWLLSALIFGQRDIG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]