| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is fcuA [H]
Identifier: 78064822
GI number: 78064822
Start: 201113
End: 203329
Strand: Reverse
Name: fcuA [H]
Synonym: Bcep18194_A3345
Alternate gene names: 78064822
Gene position: 203329-201113 (Counterclockwise)
Preceding gene: 78064824
Following gene: 78064820
Centisome position: 5.5
GC content: 67.07
Gene sequence:
>2217_bases ATGGAATTGTTGCGCGTTCGACGGGTTTTGATACGATGCGCGACATTTTATCGCAATGCGAATGATTCTTACTTGCATTT TTACTTATCCGCCATGACCGTCAGCCTCGCCCGCCCTCCCGTCCGTCCACGTCGCGTGGCCGCCGCCCTTGCCTGCGTTG CCGCATCGCTCGCGCACGCGGACGATTCGCCCGGCGGCGCCACGGCGTTGCCGGCCATCAACGTCACCGCTGCGCATGAT TCGCCGCAGCACCTGACCGACACGATTTCCACCGGCGCGCTCGGCACGCGGCGCCAGCTCGACACGCCGTTCTCGACGAC GATCGTCACGTCGGAGGAGCTCGAGGCACGTCAGCCGTACAAGCTCGGCGACGTGTTCGCGAACGACGCGTCGGTGTCCG ACAACAGCGGCGCGTACAGCGCGTGGGCCAGCTACATGACCGTGCGCGGCATGCAGCTCGACTGGCAGAACGGCTTCAAG ATCGACGGGCTGCCGTTCGTCACGTACGGGATCACGATGCCGTACGAACAGCTCGATCGCGTCGAGCTGCTGAAGGGGCT CGGCGGTTTCCTGTACGGCTTCGTGACGCCCGGCGGCGTCGTCAACTACGTGACGAAGCAGCCGGGCGCCGAACCCGTGC GCAGCGTCGACGTCGGCTACCGGAGCACCAGCGTGTGGACCGAGCACGTCGATCTCGGCCAGCGCTTCGGGCCGAACGGC ATGTTCGGCGCGCGGCTGAACGCGACGCACGAGGAAGGCAAGACGTACAACGACGGCAACATCCGCCGCGACAGCGTATC GCTCGCGCTGCAGGCGAACCTGACGCGCGACCTGTCGGTGACGTTCGGCGCGCTGTACCAGGACCGCCGCACGACGGGCC AGACGCCGTCGATCTTCACCGGCAGCTACCCGGGCGGCGTGCTGCCCGCGACCATCAGCGGCGGCACGACGAACCTCGGC GGCAAGGACCAGTACCTGAACACGAACCTGCAGCTCTACACGGCCGGGCTGCAATACCAGCTCGCGCCCGACTGGCAGCT CGACGTCGCGTACAGCTACAGCAAGGCGACGCGCCGCCGCAACGAAAGCACGCTGACCCTGCAGGACGCGGCCGGCAACT ACACCGACAGCCGCTACGTCGGGATGGAGGATCACCGCTTCAGCCAATGGCGAGCGATGGTCGAGGGCAAGGTGCGCACG GGCCCGTTCAGCCACCAGATCGTGCTCGGCGCATCGTGGCAGAAGCAGGCGAACGACTATTCGGCGAACAGCGTGTTCGT GCCGCTCGGCGCCGGCAACCTGTATGCGCCGAACCCGTACCGCTACGACAGCCCGCACGGCTTCGTCCAGTACCGCACGA GCGAGATCGTCCAGAAATCGCTGTTCGCGAGCGACACCGTGCAGCTCACCGAGCGGTGGTCGGTGCTCGCCGGCGTGCGC TACATGAACTACGAGCAGCGCTCGTTCCAGGCAAGCGGCGTCGAGGATCCCGGCTACCGCCAGAACGGCGTCGTGACGCC GACGTTCGCGGTGATGTTCAAGCTCGCGCCGACCACCACCGCGTACGCGAGCTACGCCGAATCGCTCGAGCCCGGCAGCC GCGTGAACGACGTCTACGCGAACGCCGGCCAGGTGCTCAAACCGCTGCGCAGCAAGCAATACGAGTTGGGGATCAAGAGC GAGCACGCGCGCTGGAGCGCAACGGCCGCGCTGTTCCGCATCGAGCGCAGCGCCGAGTATGCGAACGCCGCGAACGTCTA CGTGCAGGACGGCGAATCGATCATCCAGGGGATCGAGTTCGGCGCTCGCGCGAAATTCGGCGCGCGCTGGACCGCGGGCG TCGACGCGATGCTGCTCGACGCGTGGTACGCGAACGGGATCGGTAACAACGGCAACCGTGTTGCGGGCGCGCCACGTTTC GTGCTCGCCGGCGACATCGGCTATGCGGTGCCGGGCGTGCCGGGGCTGACGCTCGGCGTCGATGCGAAATTCACCGGCGC AACGCCGCTGCGCGCGGCCGGCGGCCTCGACGCGCCGGGCTTTCTCGTCGTCAATGCGGGCGCGCGCTACCTGACACGGG TCGGCCGCCACGATGTGACGCTGCGCGCGTCGATCGACAACGTGCTGAACCGCCGCTACTGGGAATACCAGTACGCGGAC TATGTGAAGCCGGGCGACCCGCGCACGGTGAGCCTGAGCGCGAAGATCGACTTCTGA
Upstream 100 bases:
>100_bases GAGCGGCCCCGGTTCAACAGGATGCAGGTCATTTGAGGTCAGGCGCCGCGCACGAGCCGGCCGGCCGCCGCTGGCGAGAC CGGATGCCCTTGCACGCGGC
Downstream 100 bases:
>100_bases ACGGTGGGCCGGCAGGCGCAAACCGCCGGCCATCGCCCACCAGCTTGGACGGCCGCACCGCAGCGGCCGCGGGACTCGGG ATTTTCCCGGACCCCAAAAG
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 738; Mature: 738
Protein sequence:
>738_residues MELLRVRRVLIRCATFYRNANDSYLHFYLSAMTVSLARPPVRPRRVAAALACVAASLAHADDSPGGATALPAINVTAAHD SPQHLTDTISTGALGTRRQLDTPFSTTIVTSEELEARQPYKLGDVFANDASVSDNSGAYSAWASYMTVRGMQLDWQNGFK IDGLPFVTYGITMPYEQLDRVELLKGLGGFLYGFVTPGGVVNYVTKQPGAEPVRSVDVGYRSTSVWTEHVDLGQRFGPNG MFGARLNATHEEGKTYNDGNIRRDSVSLALQANLTRDLSVTFGALYQDRRTTGQTPSIFTGSYPGGVLPATISGGTTNLG GKDQYLNTNLQLYTAGLQYQLAPDWQLDVAYSYSKATRRRNESTLTLQDAAGNYTDSRYVGMEDHRFSQWRAMVEGKVRT GPFSHQIVLGASWQKQANDYSANSVFVPLGAGNLYAPNPYRYDSPHGFVQYRTSEIVQKSLFASDTVQLTERWSVLAGVR YMNYEQRSFQASGVEDPGYRQNGVVTPTFAVMFKLAPTTTAYASYAESLEPGSRVNDVYANAGQVLKPLRSKQYELGIKS EHARWSATAALFRIERSAEYANAANVYVQDGESIIQGIEFGARAKFGARWTAGVDAMLLDAWYANGIGNNGNRVAGAPRF VLAGDIGYAVPGVPGLTLGVDAKFTGATPLRAAGGLDAPGFLVVNAGARYLTRVGRHDVTLRASIDNVLNRRYWEYQYAD YVKPGDPRTVSLSAKIDF
Sequences:
>Translated_738_residues MELLRVRRVLIRCATFYRNANDSYLHFYLSAMTVSLARPPVRPRRVAAALACVAASLAHADDSPGGATALPAINVTAAHD SPQHLTDTISTGALGTRRQLDTPFSTTIVTSEELEARQPYKLGDVFANDASVSDNSGAYSAWASYMTVRGMQLDWQNGFK IDGLPFVTYGITMPYEQLDRVELLKGLGGFLYGFVTPGGVVNYVTKQPGAEPVRSVDVGYRSTSVWTEHVDLGQRFGPNG MFGARLNATHEEGKTYNDGNIRRDSVSLALQANLTRDLSVTFGALYQDRRTTGQTPSIFTGSYPGGVLPATISGGTTNLG GKDQYLNTNLQLYTAGLQYQLAPDWQLDVAYSYSKATRRRNESTLTLQDAAGNYTDSRYVGMEDHRFSQWRAMVEGKVRT GPFSHQIVLGASWQKQANDYSANSVFVPLGAGNLYAPNPYRYDSPHGFVQYRTSEIVQKSLFASDTVQLTERWSVLAGVR YMNYEQRSFQASGVEDPGYRQNGVVTPTFAVMFKLAPTTTAYASYAESLEPGSRVNDVYANAGQVLKPLRSKQYELGIKS EHARWSATAALFRIERSAEYANAANVYVQDGESIIQGIEFGARAKFGARWTAGVDAMLLDAWYANGIGNNGNRVAGAPRF VLAGDIGYAVPGVPGLTLGVDAKFTGATPLRAAGGLDAPGFLVVNAGARYLTRVGRHDVTLRASIDNVLNRRYWEYQYAD YVKPGDPRTVSLSAKIDF >Mature_738_residues MELLRVRRVLIRCATFYRNANDSYLHFYLSAMTVSLARPPVRPRRVAAALACVAASLAHADDSPGGATALPAINVTAAHD SPQHLTDTISTGALGTRRQLDTPFSTTIVTSEELEARQPYKLGDVFANDASVSDNSGAYSAWASYMTVRGMQLDWQNGFK IDGLPFVTYGITMPYEQLDRVELLKGLGGFLYGFVTPGGVVNYVTKQPGAEPVRSVDVGYRSTSVWTEHVDLGQRFGPNG MFGARLNATHEEGKTYNDGNIRRDSVSLALQANLTRDLSVTFGALYQDRRTTGQTPSIFTGSYPGGVLPATISGGTTNLG GKDQYLNTNLQLYTAGLQYQLAPDWQLDVAYSYSKATRRRNESTLTLQDAAGNYTDSRYVGMEDHRFSQWRAMVEGKVRT GPFSHQIVLGASWQKQANDYSANSVFVPLGAGNLYAPNPYRYDSPHGFVQYRTSEIVQKSLFASDTVQLTERWSVLAGVR YMNYEQRSFQASGVEDPGYRQNGVVTPTFAVMFKLAPTTTAYASYAESLEPGSRVNDVYANAGQVLKPLRSKQYELGIKS EHARWSATAALFRIERSAEYANAANVYVQDGESIIQGIEFGARAKFGARWTAGVDAMLLDAWYANGIGNNGNRVAGAPRF VLAGDIGYAVPGVPGLTLGVDAKFTGATPLRAAGGLDAPGFLVVNAGARYLTRVGRHDVTLRASIDNVLNRRYWEYQYAD YVKPGDPRTVSLSAKIDF
Specific function: Receptor for the hydroxamate siderophore, ferrichrome. Binds also to most other ferrichrome derivatives except enantio ferrichrome and ferric rhodotorulate [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=741, Percent_Identity=24.2914979757085, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1787344, Length=756, Percent_Identity=23.8095238095238, Blast_Score=110, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80639; Mature: 80639
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLRVRRVLIRCATFYRNANDSYLHFYLSAMTVSLARPPVRPRRVAAALACVAASLAHA CHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC DDSPGGATALPAINVTAAHDSPQHLTDTISTGALGTRRQLDTPFSTTIVTSEELEARQPY CCCCCCCEECCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHCCCCC KLGDVFANDASVSDNSGAYSAWASYMTVRGMQLDWQNGFKIDGLPFVTYGITMPYEQLDR CHHHEECCCCCCCCCCCCHHHHHHHHHEECEEEECCCCCEECCCCEEEEEEECCHHHHHH VELLKGLGGFLYGFVTPGGVVNYVTKQPGAEPVRSVDVGYRSTSVWTEHVDLGQRFGPNG HHHHHHHCHHEEECCCCCCEEEHHHCCCCCCCHHHHCCCCCCCCEEHHHHHHHHHCCCCC MFGARLNATHEEGKTYNDGNIRRDSVSLALQANLTRDLSVTFGALYQDRRTTGQTPSIFT CCCCEECCCHHCCCEECCCCEEECCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEE GSYPGGVLPATISGGTTNLGGKDQYLNTNLQLYTAGLQYQLAPDWQLDVAYSYSKATRRR CCCCCCCEEEEECCCCCCCCCCCCEECCCEEEEEECEEEEECCCCEEEEEEEHHHHHHCC NESTLTLQDAAGNYTDSRYVGMEDHRFSQWRAMVEGKVRTGPFSHQIVLGASWQKQANDY CCCEEEEECCCCCCCCCEEECCCCCHHHHHHHHHCCCEECCCCCCEEEEECCHHHHCCCC SANSVFVPLGAGNLYAPNPYRYDSPHGFVQYRTSEIVQKSLFASDTVQLTERWSVLAGVR CCCEEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHH YMNYEQRSFQASGVEDPGYRQNGVVTPTFAVMFKLAPTTTAYASYAESLEPGSRVNDVYA HCCCHHHCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCHHHHHHHHHHCCCCCHHHHHHH NAGQVLKPLRSKQYELGIKSEHARWSATAALFRIERSAEYANAANVYVQDGESIIQGIEF CHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHCC GARAKFGARWTAGVDAMLLDAWYANGIGNNGNRVAGAPRFVLAGDIGYAVPGVPGLTLGV CCCCCCCCEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEC DAKFTGATPLRAAGGLDAPGFLVVNAGARYLTRVGRHDVTLRASIDNVLNRRYWEYQYAD CCEECCCCCCHHCCCCCCCCEEEEECCHHHHHHCCCCCEEEEECHHHHHHHHEEEEEHHC YVKPGDPRTVSLSAKIDF CCCCCCCCEEEEEEEECC >Mature Secondary Structure MELLRVRRVLIRCATFYRNANDSYLHFYLSAMTVSLARPPVRPRRVAAALACVAASLAHA CHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC DDSPGGATALPAINVTAAHDSPQHLTDTISTGALGTRRQLDTPFSTTIVTSEELEARQPY CCCCCCCEECCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHCCCCC KLGDVFANDASVSDNSGAYSAWASYMTVRGMQLDWQNGFKIDGLPFVTYGITMPYEQLDR CHHHEECCCCCCCCCCCCHHHHHHHHHEECEEEECCCCCEECCCCEEEEEEECCHHHHHH VELLKGLGGFLYGFVTPGGVVNYVTKQPGAEPVRSVDVGYRSTSVWTEHVDLGQRFGPNG HHHHHHHCHHEEECCCCCCEEEHHHCCCCCCCHHHHCCCCCCCCEEHHHHHHHHHCCCCC MFGARLNATHEEGKTYNDGNIRRDSVSLALQANLTRDLSVTFGALYQDRRTTGQTPSIFT CCCCEECCCHHCCCEECCCCEEECCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEE GSYPGGVLPATISGGTTNLGGKDQYLNTNLQLYTAGLQYQLAPDWQLDVAYSYSKATRRR CCCCCCCEEEEECCCCCCCCCCCCEECCCEEEEEECEEEEECCCCEEEEEEEHHHHHHCC NESTLTLQDAAGNYTDSRYVGMEDHRFSQWRAMVEGKVRTGPFSHQIVLGASWQKQANDY CCCEEEEECCCCCCCCCEEECCCCCHHHHHHHHHCCCEECCCCCCEEEEECCHHHHCCCC SANSVFVPLGAGNLYAPNPYRYDSPHGFVQYRTSEIVQKSLFASDTVQLTERWSVLAGVR CCCEEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHH YMNYEQRSFQASGVEDPGYRQNGVVTPTFAVMFKLAPTTTAYASYAESLEPGSRVNDVYA HCCCHHHCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCHHHHHHHHHHCCCCCHHHHHHH NAGQVLKPLRSKQYELGIKSEHARWSATAALFRIERSAEYANAANVYVQDGESIIQGIEF CHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHCC GARAKFGARWTAGVDAMLLDAWYANGIGNNGNRVAGAPRFVLAGDIGYAVPGVPGLTLGV CCCCCCCCEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEC DAKFTGATPLRAAGGLDAPGFLVVNAGARYLTRVGRHDVTLRASIDNVLNRRYWEYQYAD CCEECCCCCCHHCCCCCCCCEEEEECCHHHHHHCCCCCEEEEECHHHHHHHHEEEEEHHC YVKPGDPRTVSLSAKIDF CCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8384682 [H]