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The map label for this gene is fliC [H]

Identifier: 78064820

GI number: 78064820

Start: 199371

End: 200189

Strand: Reverse

Name: fliC [H]

Synonym: Bcep18194_A3343

Alternate gene names: 78064820

Gene position: 200189-199371 (Counterclockwise)

Preceding gene: 78064822

Following gene: 78064819

Centisome position: 5.42

GC content: 61.9

Gene sequence:

>819_bases
ATGCTGAACATCAACACCAACATCCTTTCGCTGACGACGCAGACGAATCTGTCGGGCTCGCAAAGCGCACTGTCGCAAGC
AATCAACCGCCTGTCGTCGGGCAAGCGCATCAACACCGCTGCTGACGATGCAGCAGGCCTGGCGATCTCGACGTCGCAAA
CGGCGGCAATCAATGCGCTGACGCAAGGTGTTGCAAACGCGAACAACGGCATCTCGATGATCCAGACCGCCAACGGCGCG
CTGCAATCGACGGTCGACAACCTGCAGCGTATCCGTACGCTGGCGCAACAAGCAGGCGACGGCTCGCTGGATTCGAGCGC
TCGCGCGAACCTGCAAGCGGAAGTGACGACGCGTCTCGGCGAAATCGACCGTGTCGCATCGCAAACGACGTTCAACAGCC
AGACCATCCTGGGCGGCACCGGCAGCGTCACGTTCCAGATCGGCGCAGCAGCGAACCAGGTCGTTACCGTCGACTTCGGC
ACGGCGAACTGGAACAGCACGGGCATGAGCGTGAACACCCTGAGCGTCGCCACGCAGTCGGGCGCGCAATCGGCGATCAC
GGCGATCGACGCGGCACTGAAGCAAGTCAACACGTTCCAGGCAACGCTGGGCGCAGCACAGAACACGTTCCAGGCTGCGA
TCTCGACGACGCAAACCCAGGCAACCAACATGACCGCCGCTCGCTCGCAGATCACCGACGCGGACTTCGCGACGGAAACG
GCGAACCTGAGCAAGGCGCAAGTGCTGCAACAAGCTGGTATCTCGGTTCTGGCGCAAGCGAACTCGCTGCCGCAGCAAGT
CCTGAAGCTCCTCGGTTAA

Upstream 100 bases:

>100_bases
CGTCAACCAGGAAAGGCGGGGCAGCGCCAGTCGCGATAAAGCGCAACGCCGAAATCAAAACCTGTCTGTATCCCAGGCAT
TTTCCAAAACGAGGAAGCAA

Downstream 100 bases:

>100_bases
TCGAGCAGCACGCGCGGCGGGCAACGTGCCCGCCCGCCTCCGGGCCCGGCGGCGTCGCCATGCGACGCATCGCGACGCCG
CCGAAACCACTCGGATCAGA

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MLNINTNILSLTTQTNLSGSQSALSQAINRLSSGKRINTAADDAAGLAISTSQTAAINALTQGVANANNGISMIQTANGA
LQSTVDNLQRIRTLAQQAGDGSLDSSARANLQAEVTTRLGEIDRVASQTTFNSQTILGGTGSVTFQIGAAANQVVTVDFG
TANWNSTGMSVNTLSVATQSGAQSAITAIDAALKQVNTFQATLGAAQNTFQAAISTTQTQATNMTAARSQITDADFATET
ANLSKAQVLQQAGISVLAQANSLPQQVLKLLG

Sequences:

>Translated_272_residues
MLNINTNILSLTTQTNLSGSQSALSQAINRLSSGKRINTAADDAAGLAISTSQTAAINALTQGVANANNGISMIQTANGA
LQSTVDNLQRIRTLAQQAGDGSLDSSARANLQAEVTTRLGEIDRVASQTTFNSQTILGGTGSVTFQIGAAANQVVTVDFG
TANWNSTGMSVNTLSVATQSGAQSAITAIDAALKQVNTFQATLGAAQNTFQAAISTTQTQATNMTAARSQITDADFATET
ANLSKAQVLQQAGISVLAQANSLPQQVLKLLG
>Mature_272_residues
MLNINTNILSLTTQTNLSGSQSALSQAINRLSSGKRINTAADDAAGLAISTSQTAAINALTQGVANANNGISMIQTANGA
LQSTVDNLQRIRTLAQQAGDGSLDSSARANLQAEVTTRLGEIDRVASQTTFNSQTILGGTGSVTFQIGAAANQVVTVDFG
TANWNSTGMSVNTLSVATQSGAQSAITAIDAALKQVNTFQATLGAAQNTFQAAISTTQTQATNMTAARSQITDADFATET
ANLSKAQVLQQAGISVLAQANSLPQQVLKLLG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=156, Percent_Identity=51.9230769230769, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 27791; Mature: 27791

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNINTNILSLTTQTNLSGSQSALSQAINRLSSGKRINTAADDAAGLAISTSQTAAINAL
CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHH
TQGVANANNGISMIQTANGALQSTVDNLQRIRTLAQQAGDGSLDSSARANLQAEVTTRLG
HHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHH
EIDRVASQTTFNSQTILGGTGSVTFQIGAAANQVVTVDFGTANWNSTGMSVNTLSVATQS
HHHHHHHHCCCCCCEEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEEEEEHHC
GAQSAITAIDAALKQVNTFQATLGAAQNTFQAAISTTQTQATNMTAARSQITDADFATET
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ANLSKAQVLQQAGISVLAQANSLPQQVLKLLG
CCCHHHHHHHHHCHHHHHHHCCCHHHHHHHHC
>Mature Secondary Structure
MLNINTNILSLTTQTNLSGSQSALSQAINRLSSGKRINTAADDAAGLAISTSQTAAINAL
CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHH
TQGVANANNGISMIQTANGALQSTVDNLQRIRTLAQQAGDGSLDSSARANLQAEVTTRLG
HHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHH
EIDRVASQTTFNSQTILGGTGSVTFQIGAAANQVVTVDFGTANWNSTGMSVNTLSVATQS
HHHHHHHHCCCCCCEEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEEEEEHHC
GAQSAITAIDAALKQVNTFQATLGAAQNTFQAAISTTQTQATNMTAARSQITDADFATET
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ANLSKAQVLQQAGISVLAQANSLPQQVLKLLG
CCCHHHHHHHHHCHHHHHHHCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8996114 [H]