| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78064812
Identifier: 78064812
GI number: 78064812
Start: 187175
End: 187897
Strand: Reverse
Name: 78064812
Synonym: Bcep18194_A3335
Alternate gene names: NA
Gene position: 187897-187175 (Counterclockwise)
Preceding gene: 78064813
Following gene: 78064811
Centisome position: 5.09
GC content: 64.59
Gene sequence:
>723_bases ATGAGCGGCACGCCCATGGAAGCGGTTGCGAAGCGGGTGGCGATCGTCCAGTCGAACTACATCCCGTGGAAGGGCTATTT CGACCTGATCGCCGCCAGCGACGAATTCATCCTGTACGACGACGCGCAGTACACGCGCCGCGACTGGCGCAACCGCAACC AGATCAAGACGCCGCAGGGCGTGCAATGGCTGAGCGTGCCGGTGAAGGTGAAGGGCAAGTATCTCCAGACGATTCGCGAA ACCGAGATCGACGGCGACGACTGGGCGCCACAGCACTGGAAGCGGCTGCAGCAGAACTACGCGCGCGCGCCGCACTTCGC GGGCTATGCGGACGCGCTCGAAGCGCTTTATCTCGGCCGCCGCTACGACACGCTCAGCGAGCTGAACCGCAAGCTGCTGA TGTGGATCAACCAGCAGTTGGGAATCGACACGCGCATCTCGTCGTCGTCGGACTACACGCTGAACGGCGACCGCACCGAG AAGCTGTTGAACCTGTGCATGCAGGCGGGCGCGACCGAGTACCTGTCGGGCCCGTCCGCCCGCAGCTACCTGGACGAGAA CCTGTTCGCGGACGCGAACATCGCGGTGCGCTGGTTCGACTACCCGGCCTATCCCGAGTACCCGCAGCAGTGGGGCGACT TCGTGCATGGCGTCACCGTGCTCGACGTGCTGTTCAACTGCGGCCCCGACGCTCGCCAGTACGCGCTTTATCGGGGCGCG TGA
Upstream 100 bases:
>100_bases TGCGCGCGGACCTCGAAGCGCTGCACGACCGGATCGGCGCGACCGACTGGGGCATTCCGCCCGAGCTGGTCGACATGTAC CGGTACGGCCACATCCCGGC
Downstream 100 bases:
>100_bases AGCGATGCCGATGAACGCATCCCGTCACGCAAGCCTGCACGACGACGGCCCTGCGCGCTCGCGCGCTGCCGTCCGGCAGG ACGCCTGAACGGCGCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSGTPMEAVAKRVAIVQSNYIPWKGYFDLIAASDEFILYDDAQYTRRDWRNRNQIKTPQGVQWLSVPVKVKGKYLQTIRE TEIDGDDWAPQHWKRLQQNYARAPHFAGYADALEALYLGRRYDTLSELNRKLLMWINQQLGIDTRISSSSDYTLNGDRTE KLLNLCMQAGATEYLSGPSARSYLDENLFADANIAVRWFDYPAYPEYPQQWGDFVHGVTVLDVLFNCGPDARQYALYRGA
Sequences:
>Translated_240_residues MSGTPMEAVAKRVAIVQSNYIPWKGYFDLIAASDEFILYDDAQYTRRDWRNRNQIKTPQGVQWLSVPVKVKGKYLQTIRE TEIDGDDWAPQHWKRLQQNYARAPHFAGYADALEALYLGRRYDTLSELNRKLLMWINQQLGIDTRISSSSDYTLNGDRTE KLLNLCMQAGATEYLSGPSARSYLDENLFADANIAVRWFDYPAYPEYPQQWGDFVHGVTVLDVLFNCGPDARQYALYRGA >Mature_239_residues SGTPMEAVAKRVAIVQSNYIPWKGYFDLIAASDEFILYDDAQYTRRDWRNRNQIKTPQGVQWLSVPVKVKGKYLQTIRET EIDGDDWAPQHWKRLQQNYARAPHFAGYADALEALYLGRRYDTLSELNRKLLMWINQQLGIDTRISSSSDYTLNGDRTEK LLNLCMQAGATEYLSGPSARSYLDENLFADANIAVRWFDYPAYPEYPQQWGDFVHGVTVLDVLFNCGPDARQYALYRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014985 [H]
Pfam domain/function: PF08889 WbqC [H]
EC number: NA
Molecular weight: Translated: 27671; Mature: 27540
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTPMEAVAKRVAIVQSNYIPWKGYFDLIAASDEFILYDDAQYTRRDWRNRNQIKTPQG CCCCCHHHHHHHHHHHHCCCCCCCHHHHHEECCCCEEEECCCHHHHHHHCCCCCCCCCCC VQWLSVPVKVKGKYLQTIRETEIDGDDWAPQHWKRLQQNYARAPHFAGYADALEALYLGR CEEEECCEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC RYDTLSELNRKLLMWINQQLGIDTRISSSSDYTLNGDRTEKLLNLCMQAGATEYLSGPSA CHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHCCCHHHHCCCCH RSYLDENLFADANIAVRWFDYPAYPEYPQQWGDFVHGVTVLDVLFNCGPDARQYALYRGA HHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC >Mature Secondary Structure SGTPMEAVAKRVAIVQSNYIPWKGYFDLIAASDEFILYDDAQYTRRDWRNRNQIKTPQG CCCCHHHHHHHHHHHHCCCCCCCHHHHHEECCCCEEEECCCHHHHHHHCCCCCCCCCCC VQWLSVPVKVKGKYLQTIRETEIDGDDWAPQHWKRLQQNYARAPHFAGYADALEALYLGR CEEEECCEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC RYDTLSELNRKLLMWINQQLGIDTRISSSSDYTLNGDRTEKLLNLCMQAGATEYLSGPSA CHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHCCCHHHHCCCCH RSYLDENLFADANIAVRWFDYPAYPEYPQQWGDFVHGVTVLDVLFNCGPDARQYALYRGA HHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]