Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

Click here to switch to the map view.

The map label for this gene is 78064812

Identifier: 78064812

GI number: 78064812

Start: 187175

End: 187897

Strand: Reverse

Name: 78064812

Synonym: Bcep18194_A3335

Alternate gene names: NA

Gene position: 187897-187175 (Counterclockwise)

Preceding gene: 78064813

Following gene: 78064811

Centisome position: 5.09

GC content: 64.59

Gene sequence:

>723_bases
ATGAGCGGCACGCCCATGGAAGCGGTTGCGAAGCGGGTGGCGATCGTCCAGTCGAACTACATCCCGTGGAAGGGCTATTT
CGACCTGATCGCCGCCAGCGACGAATTCATCCTGTACGACGACGCGCAGTACACGCGCCGCGACTGGCGCAACCGCAACC
AGATCAAGACGCCGCAGGGCGTGCAATGGCTGAGCGTGCCGGTGAAGGTGAAGGGCAAGTATCTCCAGACGATTCGCGAA
ACCGAGATCGACGGCGACGACTGGGCGCCACAGCACTGGAAGCGGCTGCAGCAGAACTACGCGCGCGCGCCGCACTTCGC
GGGCTATGCGGACGCGCTCGAAGCGCTTTATCTCGGCCGCCGCTACGACACGCTCAGCGAGCTGAACCGCAAGCTGCTGA
TGTGGATCAACCAGCAGTTGGGAATCGACACGCGCATCTCGTCGTCGTCGGACTACACGCTGAACGGCGACCGCACCGAG
AAGCTGTTGAACCTGTGCATGCAGGCGGGCGCGACCGAGTACCTGTCGGGCCCGTCCGCCCGCAGCTACCTGGACGAGAA
CCTGTTCGCGGACGCGAACATCGCGGTGCGCTGGTTCGACTACCCGGCCTATCCCGAGTACCCGCAGCAGTGGGGCGACT
TCGTGCATGGCGTCACCGTGCTCGACGTGCTGTTCAACTGCGGCCCCGACGCTCGCCAGTACGCGCTTTATCGGGGCGCG
TGA

Upstream 100 bases:

>100_bases
TGCGCGCGGACCTCGAAGCGCTGCACGACCGGATCGGCGCGACCGACTGGGGCATTCCGCCCGAGCTGGTCGACATGTAC
CGGTACGGCCACATCCCGGC

Downstream 100 bases:

>100_bases
AGCGATGCCGATGAACGCATCCCGTCACGCAAGCCTGCACGACGACGGCCCTGCGCGCTCGCGCGCTGCCGTCCGGCAGG
ACGCCTGAACGGCGCCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSGTPMEAVAKRVAIVQSNYIPWKGYFDLIAASDEFILYDDAQYTRRDWRNRNQIKTPQGVQWLSVPVKVKGKYLQTIRE
TEIDGDDWAPQHWKRLQQNYARAPHFAGYADALEALYLGRRYDTLSELNRKLLMWINQQLGIDTRISSSSDYTLNGDRTE
KLLNLCMQAGATEYLSGPSARSYLDENLFADANIAVRWFDYPAYPEYPQQWGDFVHGVTVLDVLFNCGPDARQYALYRGA

Sequences:

>Translated_240_residues
MSGTPMEAVAKRVAIVQSNYIPWKGYFDLIAASDEFILYDDAQYTRRDWRNRNQIKTPQGVQWLSVPVKVKGKYLQTIRE
TEIDGDDWAPQHWKRLQQNYARAPHFAGYADALEALYLGRRYDTLSELNRKLLMWINQQLGIDTRISSSSDYTLNGDRTE
KLLNLCMQAGATEYLSGPSARSYLDENLFADANIAVRWFDYPAYPEYPQQWGDFVHGVTVLDVLFNCGPDARQYALYRGA
>Mature_239_residues
SGTPMEAVAKRVAIVQSNYIPWKGYFDLIAASDEFILYDDAQYTRRDWRNRNQIKTPQGVQWLSVPVKVKGKYLQTIRET
EIDGDDWAPQHWKRLQQNYARAPHFAGYADALEALYLGRRYDTLSELNRKLLMWINQQLGIDTRISSSSDYTLNGDRTEK
LLNLCMQAGATEYLSGPSARSYLDENLFADANIAVRWFDYPAYPEYPQQWGDFVHGVTVLDVLFNCGPDARQYALYRGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014985 [H]

Pfam domain/function: PF08889 WbqC [H]

EC number: NA

Molecular weight: Translated: 27671; Mature: 27540

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTPMEAVAKRVAIVQSNYIPWKGYFDLIAASDEFILYDDAQYTRRDWRNRNQIKTPQG
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHEECCCCEEEECCCHHHHHHHCCCCCCCCCCC
VQWLSVPVKVKGKYLQTIRETEIDGDDWAPQHWKRLQQNYARAPHFAGYADALEALYLGR
CEEEECCEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
RYDTLSELNRKLLMWINQQLGIDTRISSSSDYTLNGDRTEKLLNLCMQAGATEYLSGPSA
CHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHCCCHHHHCCCCH
RSYLDENLFADANIAVRWFDYPAYPEYPQQWGDFVHGVTVLDVLFNCGPDARQYALYRGA
HHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure 
SGTPMEAVAKRVAIVQSNYIPWKGYFDLIAASDEFILYDDAQYTRRDWRNRNQIKTPQG
CCCCHHHHHHHHHHHHCCCCCCCHHHHHEECCCCEEEECCCHHHHHHHCCCCCCCCCCC
VQWLSVPVKVKGKYLQTIRETEIDGDDWAPQHWKRLQQNYARAPHFAGYADALEALYLGR
CEEEECCEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
RYDTLSELNRKLLMWINQQLGIDTRISSSSDYTLNGDRTEKLLNLCMQAGATEYLSGPSA
CHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHCCCHHHHCCCCH
RSYLDENLFADANIAVRWFDYPAYPEYPQQWGDFVHGVTVLDVLFNCGPDARQYALYRGA
HHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]