| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78064779
Identifier: 78064779
GI number: 78064779
Start: 143984
End: 144556
Strand: Reverse
Name: 78064779
Synonym: Bcep18194_A3302
Alternate gene names: NA
Gene position: 144556-143984 (Counterclockwise)
Preceding gene: 78064780
Following gene: 78064774
Centisome position: 3.91
GC content: 69.28
Gene sequence:
>573_bases ATGTCCACCAGCCGCCCGTCCCCGCTTGCGCTGGCCGTCCTCGCGACGCTGACCGAAACGCCGATGCATCCATACGGGAT GCTGCAGCAACTGAAGGCTCGCGGGTACGACGAAGTCGTCAACGTGCGCCAGCGCACGAGCCTCTACCAGACGATCGACC GGCTGCTGCGCGACGGGATGATCGCCGTGCACGACACCGAGCGCGACGGGGCGTTTCCGGAGCGCACGCTGTATGCGCTG ACCGAGGCCGGGCACACGGCAGGGCAGGCGTGGCTGCATGCCCTGCTCGCGGAACCCGCGCGTGAATTTCCGGCGTTCGG CGCCGGTCTCGCGTTCCTGCCGCTGCTCGACGCCGAAGACGCACGCCACCAGCTCGAGCTTCGGATCGCCCGGCTCGATG CCGAGCGCGCGCGCCTTGAAACGCTGCGCGCCACCGCGCAAGCCGACCAGGTGCCGCGCCTGTTCCTGCTGCAGAACGAG CACGCGCTCGTGCTGCTCAATGCCGAACTCGAGTGGGCGCGCAGCGTCGTCGAACACATCAAGATCGGCGCGCTGCGCTG GGTGGACGGCTGA
Upstream 100 bases:
>100_bases CCCCGGCCGCGAAGCGCTCGCACCTCGGCTGAAACCCTTGTGAAATATGATAGTCTGGTTGAGAATAGTTATATCCTTAC TAGATATTAAATAACTATTC
Downstream 100 bases:
>100_bases CGCGTCACGCGGGCCAGCTCCCGCCGGCAACGCGCATCGCCGCGATCAAAGCACCTTGCCGGGATTCAGGATGCCGAGCG GATCCAGCGCGGCCTTCAGG
Product: PadR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator PadR-Like Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; MtrY Protein; Padr Family Transcriptional Regulator; Ankyrin-Like Protein; PadR Transcriptional Regulator
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSTSRPSPLALAVLATLTETPMHPYGMLQQLKARGYDEVVNVRQRTSLYQTIDRLLRDGMIAVHDTERDGAFPERTLYAL TEAGHTAGQAWLHALLAEPAREFPAFGAGLAFLPLLDAEDARHQLELRIARLDAERARLETLRATAQADQVPRLFLLQNE HALVLLNAELEWARSVVEHIKIGALRWVDG
Sequences:
>Translated_190_residues MSTSRPSPLALAVLATLTETPMHPYGMLQQLKARGYDEVVNVRQRTSLYQTIDRLLRDGMIAVHDTERDGAFPERTLYAL TEAGHTAGQAWLHALLAEPAREFPAFGAGLAFLPLLDAEDARHQLELRIARLDAERARLETLRATAQADQVPRLFLLQNE HALVLLNAELEWARSVVEHIKIGALRWVDG >Mature_189_residues STSRPSPLALAVLATLTETPMHPYGMLQQLKARGYDEVVNVRQRTSLYQTIDRLLRDGMIAVHDTERDGAFPERTLYALT EAGHTAGQAWLHALLAEPAREFPAFGAGLAFLPLLDAEDARHQLELRIARLDAERARLETLRATAQADQVPRLFLLQNEH ALVLLNAELEWARSVVEHIKIGALRWVDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21250; Mature: 21118
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSRPSPLALAVLATLTETPMHPYGMLQQLKARGYDEVVNVRQRTSLYQTIDRLLRDGM CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCE IAVHDTERDGAFPERTLYALTEAGHTAGQAWLHALLAEPAREFPAFGAGLAFLPLLDAED EEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHH ARHQLELRIARLDAERARLETLRATAQADQVPRLFLLQNEHALVLLNAELEWARSVVEHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCHHHHHHHHHHH KIGALRWVDG HHCCEEECCC >Mature Secondary Structure STSRPSPLALAVLATLTETPMHPYGMLQQLKARGYDEVVNVRQRTSLYQTIDRLLRDGM CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCE IAVHDTERDGAFPERTLYALTEAGHTAGQAWLHALLAEPAREFPAFGAGLAFLPLLDAED EEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHH ARHQLELRIARLDAERARLETLRATAQADQVPRLFLLQNEHALVLLNAELEWARSVVEHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCHHHHHHHHHHH KIGALRWVDG HHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA