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The map label for this gene is aidB [H]

Identifier: 78064774

GI number: 78064774

Start: 137842

End: 139494

Strand: Reverse

Name: aidB [H]

Synonym: Bcep18194_A3297

Alternate gene names: 78064774

Gene position: 139494-137842 (Counterclockwise)

Preceding gene: 78064779

Following gene: 78064773

Centisome position: 3.78

GC content: 70.11

Gene sequence:

>1653_bases
ATGACCGAATCGACTCACGCCGTCACGAACCAGTTCGACGAACTGGTCGACTATAACCTCTTCGCGACGGACATCGCGCT
GCGCGACGCGCTCATCCGCGCGGGCGCCGACTGGGCCGTGCCGCAGCTCGACGCGTACGGCGCGCGACTCGGCAGCGCCG
ACACTGCGCGGCTCGCCGACGAAGCGAACCACCACACACCGGAACTGCACACCTTCGACCGGCGCGGCCGGCGCATCGAC
CGCGTCGACTTCCACCCGGCCTGGCACGCACTCCTCGGTCAGTACCGCCACGAAGGCTTCGTGTCGCTCGCCTTCCGCGA
GTCGCGCCGCGGCCGCTGGGCCGCGACCGCGGCCGGCTTCTACCTGCATGGCCAAATCGAGGCCGGCACGCTGTGCCCGG
CGACGATGACGCAGGCCGCGATCCCCGTGCTGCAGAAGGAGCCCGCGCTGTGGGACCTGCTGCGCGACAAGCTCTACAGC
AACGATTACGATCCGCGCGACGTGCCGGTCGCCGAAAAACGCTCGATCTGGTTCGGCATGGGCATGACCGAGAAACAGGG
CGGCTCCGACGTGCGCGCAAATACGACGCTCGCGACCGCCGTCGGCGCGGGCGGCCGCGGCGGCGAATACCGGCTGCGCG
GCCACAAATGGTTTTTCTCCGCACCGATGTGCGACGCGCACCTGGTCGTCGCGCGCACCGAGGCCGGCAGCCCGTCGTGC
TTCTACGTGCCGCGCTGGCGGCCGGACGGCACGAAGAACGCGGTCGAGATCCAGCGGCTGAAGGACAAGGTCGGCAACCG
CAGCAACTCGAGCAGCGAGATCGAGCTGAACGACGCGTGGGGCATCATGCTCGGCGACGAAGGCCGCGGCATTCCGACCA
TCATCGAGATGGCCACCTACACGCGGCTGAACTGCGTGCTCGGCAGCGCGGCGATGCTGCGCCAGGGCGTCGTGCAGGCG
ATCGCGTACACGCGCCAACGCCATGCATTCGGGCGCGCACTCGCCGAGCAGCCGCTGATGCGTACCGTGCTCGCCGATCT
CGCGCTCGAAAGCGAAGCGGCGCTGTCTCTCTCGATGCGTCTCGCCGACGCGTTCGAGCGCGACGACTCGCCGCGCGAAC
GCGCATGGAAGCGGATCGTCACGCCCGCCGCGAAATTCTGGGTATGCAAACGCGCGGTCGAGCTGACCGGCGAGGTGATG
GAAGTGTTCGGCGGCAACGGCTACGTCGACGACGGCCCGATCGCGCGGCTGTTCCGCGAGGCACCCGTCAACTCGATCTG
GGAAGGCTCGGGCAACGTGATGTGTCTCGACGTGCTGCGCGCGATATCGCGCGAGCCCGACGCAGCTGAGGCGCTGTTCG
CCGAACTCGCCGATCTCGGCGCGGGCGAACCGCACATCCGCGCGGCGCTCGATGCGCTGCGCGTGATGCTCGCGGCGCCG
GCCGACACGCTCGAGGCATCGGGCCGCGTGTTCGCGCAACGGCTCGCGGTGATCGCGCAGGCGTGCCTGCTGCGCCGCGA
TGCGCCGGCAGCCGTTGCCGACGCATTCGTCGCGACGCGGCTCGCCGCGCCCGACTGGGGCCGCATCGCGGGCGGCTTCG
ACCCGCACGCGATCGACGTCGCCGCGCTGCTGCAGCGTGCGTACCCGGCCTGA

Upstream 100 bases:

>100_bases
CAGGGAATGCGGTTTACCGGGGGCCGGAACCGGCGCCGAAGCGCCATCCATGCGGCATGGCGCCGGCCGCCCGCGAAGCA
TGAGACCGGAGACAACCTCG

Downstream 100 bases:

>100_bases
TGCCGTTTCGGATAGCTTAGTACGACCCAGTTCGCCTTCGATCGCCCGCCCGGAGTCCCGATGAACCTCGTCGCCGCCCT
TGACCGCGCCGCCCGTGCGA

Product: Acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 549

Protein sequence:

>550_residues
MTESTHAVTNQFDELVDYNLFATDIALRDALIRAGADWAVPQLDAYGARLGSADTARLADEANHHTPELHTFDRRGRRID
RVDFHPAWHALLGQYRHEGFVSLAFRESRRGRWAATAAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYS
NDYDPRDVPVAEKRSIWFGMGMTEKQGGSDVRANTTLATAVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPSC
FYVPRWRPDGTKNAVEIQRLKDKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATYTRLNCVLGSAAMLRQGVVQA
IAYTRQRHAFGRALAEQPLMRTVLADLALESEAALSLSMRLADAFERDDSPRERAWKRIVTPAAKFWVCKRAVELTGEVM
EVFGGNGYVDDGPIARLFREAPVNSIWEGSGNVMCLDVLRAISREPDAAEALFAELADLGAGEPHIRAALDALRVMLAAP
ADTLEASGRVFAQRLAVIAQACLLRRDAPAAVADAFVATRLAAPDWGRIAGGFDPHAIDVAALLQRAYPA

Sequences:

>Translated_550_residues
MTESTHAVTNQFDELVDYNLFATDIALRDALIRAGADWAVPQLDAYGARLGSADTARLADEANHHTPELHTFDRRGRRID
RVDFHPAWHALLGQYRHEGFVSLAFRESRRGRWAATAAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYS
NDYDPRDVPVAEKRSIWFGMGMTEKQGGSDVRANTTLATAVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPSC
FYVPRWRPDGTKNAVEIQRLKDKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATYTRLNCVLGSAAMLRQGVVQA
IAYTRQRHAFGRALAEQPLMRTVLADLALESEAALSLSMRLADAFERDDSPRERAWKRIVTPAAKFWVCKRAVELTGEVM
EVFGGNGYVDDGPIARLFREAPVNSIWEGSGNVMCLDVLRAISREPDAAEALFAELADLGAGEPHIRAALDALRVMLAAP
ADTLEASGRVFAQRLAVIAQACLLRRDAPAAVADAFVATRLAAPDWGRIAGGFDPHAIDVAALLQRAYPA
>Mature_549_residues
TESTHAVTNQFDELVDYNLFATDIALRDALIRAGADWAVPQLDAYGARLGSADTARLADEANHHTPELHTFDRRGRRIDR
VDFHPAWHALLGQYRHEGFVSLAFRESRRGRWAATAAGFYLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSN
DYDPRDVPVAEKRSIWFGMGMTEKQGGSDVRANTTLATAVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPSCF
YVPRWRPDGTKNAVEIQRLKDKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATYTRLNCVLGSAAMLRQGVVQAI
AYTRQRHAFGRALAEQPLMRTVLADLALESEAALSLSMRLADAFERDDSPRERAWKRIVTPAAKFWVCKRAVELTGEVME
VFGGNGYVDDGPIARLFREAPVNSIWEGSGNVMCLDVLRAISREPDAAEALFAELADLGAGEPHIRAALDALRVMLAAPA
DTLEASGRVFAQRLAVIAQACLLRRDAPAAVADAFVATRLAAPDWGRIAGGFDPHAIDVAALLQRAYPA

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=269, Percent_Identity=25.6505576208178, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI226958414, Length=269, Percent_Identity=25.6505576208178, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI4557231, Length=266, Percent_Identity=25.187969924812, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI187960098, Length=266, Percent_Identity=25.187969924812, Blast_Score=73, Evalue=8e-13,
Organism=Homo sapiens, GI4557233, Length=267, Percent_Identity=26.2172284644195, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI7656849, Length=276, Percent_Identity=26.8115942028986, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI4501859, Length=276, Percent_Identity=26.4492753623188, Blast_Score=66, Evalue=9e-11,
Organism=Escherichia coli, GI87082384, Length=523, Percent_Identity=45.5066921606119, Blast_Score=431, Evalue=1e-122,
Organism=Escherichia coli, GI1786223, Length=274, Percent_Identity=25.1824817518248, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081958, Length=272, Percent_Identity=23.8970588235294, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI86563383, Length=525, Percent_Identity=28.3809523809524, Blast_Score=171, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI86563381, Length=525, Percent_Identity=28.3809523809524, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17538396, Length=274, Percent_Identity=25.9124087591241, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17508101, Length=276, Percent_Identity=25.3623188405797, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17569725, Length=267, Percent_Identity=23.5955056179775, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17533517, Length=271, Percent_Identity=25.0922509225092, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17505929, Length=332, Percent_Identity=26.8072289156627, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24660351, Length=274, Percent_Identity=27.3722627737226, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21355753, Length=275, Percent_Identity=24, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21356377, Length=276, Percent_Identity=26.4492753623188, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24646207, Length=289, Percent_Identity=24.5674740484429, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: NA

Molecular weight: Translated: 60206; Mature: 60075

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESTHAVTNQFDELVDYNLFATDIALRDALIRAGADWAVPQLDAYGARLGSADTARLAD
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHH
EANHHTPELHTFDRRGRRIDRVDFHPAWHALLGQYRHEGFVSLAFRESRRGRWAATAAGF
HCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEHHCCCCCEEEEECCE
YLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSNDYDPRDVPVAEKRSIWFGM
EEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEC
GMTEKQGGSDVRANTTLATAVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPSC
CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCEEEEECCCCCCEEEEEEECCCCCCE
FYVPRWRPDGTKNAVEIQRLKDKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATY
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCCCCHHHHHHHHH
TRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALSLSMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LADAFERDDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFRE
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
APVNSIWEGSGNVMCLDVLRAISREPDAAEALFAELADLGAGEPHIRAALDALRVMLAAP
CCCCHHHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
ADTLEASGRVFAQRLAVIAQACLLRRDAPAAVADAFVATRLAAPDWGRIAGGFDPHAIDV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
AALLQRAYPA
HHHHHHHCCC
>Mature Secondary Structure 
TESTHAVTNQFDELVDYNLFATDIALRDALIRAGADWAVPQLDAYGARLGSADTARLAD
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHH
EANHHTPELHTFDRRGRRIDRVDFHPAWHALLGQYRHEGFVSLAFRESRRGRWAATAAGF
HCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEHHCCCCCEEEEECCE
YLHGQIEAGTLCPATMTQAAIPVLQKEPALWDLLRDKLYSNDYDPRDVPVAEKRSIWFGM
EEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEC
GMTEKQGGSDVRANTTLATAVGAGGRGGEYRLRGHKWFFSAPMCDAHLVVARTEAGSPSC
CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCEEEEECCCCCCEEEEEEECCCCCCE
FYVPRWRPDGTKNAVEIQRLKDKVGNRSNSSSEIELNDAWGIMLGDEGRGIPTIIEMATY
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCCCCHHHHHHHHH
TRLNCVLGSAAMLRQGVVQAIAYTRQRHAFGRALAEQPLMRTVLADLALESEAALSLSMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LADAFERDDSPRERAWKRIVTPAAKFWVCKRAVELTGEVMEVFGGNGYVDDGPIARLFRE
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
APVNSIWEGSGNVMCLDVLRAISREPDAAEALFAELADLGAGEPHIRAALDALRVMLAAP
CCCCHHHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
ADTLEASGRVFAQRLAVIAQACLLRRDAPAAVADAFVATRLAAPDWGRIAGGFDPHAIDV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
AALLQRAYPA
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]