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The map label for this gene is glcD [H]

Identifier: 78064778

GI number: 78064778

Start: 142508

End: 143938

Strand: Direct

Name: glcD [H]

Synonym: Bcep18194_A3301

Alternate gene names: 78064778

Gene position: 142508-143938 (Clockwise)

Preceding gene: 78064777

Following gene: 78064781

Centisome position: 3.86

GC content: 70.02

Gene sequence:

>1431_bases
ATGCAGAACCGGAACACGGCCGCCGCGGGTGGCGAACAGGGCGACGCATCGCTGTCGGGCGACGCGATCGATGCCGTGCT
CGTCGCGGAACTGGGCGATGCGCTCGTCACGCGCCCGGTCGACATCGATCCGCGTTATTTCACGGCGTACAACGAGCCGG
CCGGCGTGCGGCCGCGCGCGCTGGTGCGCCCGCGCAGCGTCGACGACGTGTCGCGCACGCTCGCGCTGTGCGCGCGGCTC
GGCCAGCCGGTCGTGCCGCAGGGCGGCCTGACGGGGCTCGCGCGCGGCGCGGTCGCGCTTGGCGGCGAGGTCGTGTTGTC
GATGGAACGCTTCGCGGGCATCGAGGCGCTCGACGTGGCGGCCGGCACGATGATCGTGCGCGCCGGGACGCCGCTGCAGA
CGGTGCAGGAAGCCGCGGAAGCGGCGGGTTTCACGTTCGGCGTCGATCTCGGCGCACGCGGCTCATGCCAGATCGGCGGG
ATGCTCGCGACCAACGCGGGCGGCACGCGCGCGATCCGCTACGGGATGATGCGCGAGCAGGTGCTCGGGCTCGAGACCGT
GCTCGCGGACGGCACGGTCGTGTCGTCGATGAACCGGATGCTGAAGAACAACGCGGGCTACGACCTGAAGCAGCTGTTCA
TCGGCAGCGAGGGGACGCTCGGCGTCGTCACGCGGGCGGTGCTGCGGCTGCATCCGTTGCTCGCTGCGCCGGCCACGGCG
CTCTGCCGCGTGCGCGACTACGACGCGGTGGTCGCGCTGTGGAACCGCGTGCGCATGCTGCCGGAGGTCGTCAGTTTCGA
GGCGATGTGGCCGGCGTTCTACGACTACGTCGCGCGTCACACGCCGGGCGCTGCGGCGCCGTTTGTCGGCGACGAGGGCT
TCGCGATCCTGATCGAATGCGCGACGAGCGCACCGGGCGGCGACGCGCACCAGGCACTGGAAAACGGTCTCGCGGCGGGG
TTCGACGCAGGGCTCGTGGAGGATGCGGTGCTCGCGACGTCGGAGCGGCAGGCGCGCGACTTGTGGACGCTGCGCGAAGG
CCTCGCGATCGACGCGCTGCCACATCTCGTCAACTTCGACGTGAGCCTGCCGACAGGCGAACTCGGCGCGTTCGCCGAGC
GCTGCGAGGCGGCGTTGCGTTCACGCTGGCCGGATGTCACGTGCCTGTTCTTCGGCCATGTCGGCGACGGCAACGTGCAT
ATCGGCGTGTCGCTGGCCGGGATGACCGATACGGACCTCGATGCGCTCGATCACTGCGTGTATGCGGTGGTGCGTGACAT
GGGAGGCTCGGTATCGGCCGAGCACGGGATCGGCGTGCTCAAGCGTCCCTATCTCGCGCATACGCGCAGTGACGCGGAAA
TCGGATTGATGCGATGCCTGAAGGCCGCGCTGGATCCGCTCGGCATCCTGAATCCCGGCAAGGTGCTTTGA

Upstream 100 bases:

>100_bases
GGCGATCGACAAGCTGAAGGCGGACGGCACGGTGAAGTCGCTCGGCCTGAAGTATTTCGGCGATATCGACATCTCGGCGA
AGTAAGCGGAGCCGCACGCG

Downstream 100 bases:

>100_bases
TCGCGGCGATGCGCGTTGCCGGCGGGAGCTGGCCCGCGTGACGCGTCAGCCGTCCACCCAGCGCAGCGCGCCGATCTTGA
TGTGTTCGACGACGCTGCGC

Product: FAD linked oxidase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MQNRNTAAAGGEQGDASLSGDAIDAVLVAELGDALVTRPVDIDPRYFTAYNEPAGVRPRALVRPRSVDDVSRTLALCARL
GQPVVPQGGLTGLARGAVALGGEVVLSMERFAGIEALDVAAGTMIVRAGTPLQTVQEAAEAAGFTFGVDLGARGSCQIGG
MLATNAGGTRAIRYGMMREQVLGLETVLADGTVVSSMNRMLKNNAGYDLKQLFIGSEGTLGVVTRAVLRLHPLLAAPATA
LCRVRDYDAVVALWNRVRMLPEVVSFEAMWPAFYDYVARHTPGAAAPFVGDEGFAILIECATSAPGGDAHQALENGLAAG
FDAGLVEDAVLATSERQARDLWTLREGLAIDALPHLVNFDVSLPTGELGAFAERCEAALRSRWPDVTCLFFGHVGDGNVH
IGVSLAGMTDTDLDALDHCVYAVVRDMGGSVSAEHGIGVLKRPYLAHTRSDAEIGLMRCLKAALDPLGILNPGKVL

Sequences:

>Translated_476_residues
MQNRNTAAAGGEQGDASLSGDAIDAVLVAELGDALVTRPVDIDPRYFTAYNEPAGVRPRALVRPRSVDDVSRTLALCARL
GQPVVPQGGLTGLARGAVALGGEVVLSMERFAGIEALDVAAGTMIVRAGTPLQTVQEAAEAAGFTFGVDLGARGSCQIGG
MLATNAGGTRAIRYGMMREQVLGLETVLADGTVVSSMNRMLKNNAGYDLKQLFIGSEGTLGVVTRAVLRLHPLLAAPATA
LCRVRDYDAVVALWNRVRMLPEVVSFEAMWPAFYDYVARHTPGAAAPFVGDEGFAILIECATSAPGGDAHQALENGLAAG
FDAGLVEDAVLATSERQARDLWTLREGLAIDALPHLVNFDVSLPTGELGAFAERCEAALRSRWPDVTCLFFGHVGDGNVH
IGVSLAGMTDTDLDALDHCVYAVVRDMGGSVSAEHGIGVLKRPYLAHTRSDAEIGLMRCLKAALDPLGILNPGKVL
>Mature_476_residues
MQNRNTAAAGGEQGDASLSGDAIDAVLVAELGDALVTRPVDIDPRYFTAYNEPAGVRPRALVRPRSVDDVSRTLALCARL
GQPVVPQGGLTGLARGAVALGGEVVLSMERFAGIEALDVAAGTMIVRAGTPLQTVQEAAEAAGFTFGVDLGARGSCQIGG
MLATNAGGTRAIRYGMMREQVLGLETVLADGTVVSSMNRMLKNNAGYDLKQLFIGSEGTLGVVTRAVLRLHPLLAAPATA
LCRVRDYDAVVALWNRVRMLPEVVSFEAMWPAFYDYVARHTPGAAAPFVGDEGFAILIECATSAPGGDAHQALENGLAAG
FDAGLVEDAVLATSERQARDLWTLREGLAIDALPHLVNFDVSLPTGELGAFAERCEAALRSRWPDVTCLFFGHVGDGNVH
IGVSLAGMTDTDLDALDHCVYAVVRDMGGSVSAEHGIGVLKRPYLAHTRSDAEIGLMRCLKAALDPLGILNPGKVL

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=422, Percent_Identity=39.3364928909953, Blast_Score=260, Evalue=2e-69,
Organism=Homo sapiens, GI37595756, Length=444, Percent_Identity=33.3333333333333, Blast_Score=167, Evalue=3e-41,
Organism=Homo sapiens, GI37595754, Length=467, Percent_Identity=31.6916488222698, Blast_Score=157, Evalue=2e-38,
Organism=Escherichia coli, GI1789351, Length=429, Percent_Identity=28.2051282051282, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI48994907, Length=174, Percent_Identity=29.8850574712644, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI48994914, Length=151, Percent_Identity=32.4503311258278, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17534361, Length=429, Percent_Identity=34.2657342657343, Blast_Score=207, Evalue=8e-54,
Organism=Caenorhabditis elegans, GI71992373, Length=440, Percent_Identity=31.1363636363636, Blast_Score=177, Evalue=9e-45,
Organism=Caenorhabditis elegans, GI71992381, Length=440, Percent_Identity=30.2272727272727, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI71992392, Length=399, Percent_Identity=30.5764411027569, Blast_Score=150, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6320023, Length=431, Percent_Identity=37.8190255220418, Blast_Score=272, Evalue=1e-73,
Organism=Saccharomyces cerevisiae, GI6320764, Length=448, Percent_Identity=33.4821428571429, Blast_Score=236, Evalue=4e-63,
Organism=Saccharomyces cerevisiae, GI6320027, Length=460, Percent_Identity=27.3913043478261, Blast_Score=161, Evalue=2e-40,
Organism=Drosophila melanogaster, GI18921117, Length=432, Percent_Identity=34.4907407407407, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI24639277, Length=432, Percent_Identity=34.4907407407407, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI24639275, Length=432, Percent_Identity=34.4907407407407, Blast_Score=232, Evalue=4e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 49942; Mature: 49942

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNRNTAAAGGEQGDASLSGDAIDAVLVAELGDALVTRPVDIDPRYFTAYNEPAGVRPRA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHH
LVRPRSVDDVSRTLALCARLGQPVVPQGGLTGLARGAVALGGEVVLSMERFAGIEALDVA
EECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHEEEHHHHCCCHHHHHC
AGTMIVRAGTPLQTVQEAAEAAGFTFGVDLGARGSCQIGGMLATNAGGTRAIRYGMMREQ
CCEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCEECCEEEECCCCHHHHHHHHHHHH
VLGLETVLADGTVVSSMNRMLKNNAGYDLKQLFIGSEGTLGVVTRAVLRLHPLLAAPATA
HHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHCCHHH
LCRVRDYDAVVALWNRVRMLPEVVSFEAMWPAFYDYVARHTPGAAAPFVGDEGFAILIEC
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE
ATSAPGGDAHQALENGLAAGFDAGLVEDAVLATSERQARDLWTLREGLAIDALPHLVNFD
CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCC
VSLPTGELGAFAERCEAALRSRWPDVTCLFFGHVGDGNVHIGVSLAGMTDTDLDALDHCV
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHH
YAVVRDMGGSVSAEHGIGVLKRPYLAHTRSDAEIGLMRCLKAALDPLGILNPGKVL
HHHHHHCCCCCCCCCCCCHHCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQNRNTAAAGGEQGDASLSGDAIDAVLVAELGDALVTRPVDIDPRYFTAYNEPAGVRPRA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHH
LVRPRSVDDVSRTLALCARLGQPVVPQGGLTGLARGAVALGGEVVLSMERFAGIEALDVA
EECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHEEEHHHHCCCHHHHHC
AGTMIVRAGTPLQTVQEAAEAAGFTFGVDLGARGSCQIGGMLATNAGGTRAIRYGMMREQ
CCEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCEECCEEEECCCCHHHHHHHHHHHH
VLGLETVLADGTVVSSMNRMLKNNAGYDLKQLFIGSEGTLGVVTRAVLRLHPLLAAPATA
HHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHCCHHH
LCRVRDYDAVVALWNRVRMLPEVVSFEAMWPAFYDYVARHTPGAAAPFVGDEGFAILIEC
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE
ATSAPGGDAHQALENGLAAGFDAGLVEDAVLATSERQARDLWTLREGLAIDALPHLVNFD
CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCC
VSLPTGELGAFAERCEAALRSRWPDVTCLFFGHVGDGNVHIGVSLAGMTDTDLDALDHCV
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHH
YAVVRDMGGSVSAEHGIGVLKRPYLAHTRSDAEIGLMRCLKAALDPLGILNPGKVL
HHHHHHCCCCCCCCCCCCHHCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]