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The map label for this gene is 78064731

Identifier: 78064731

GI number: 78064731

Start: 88547

End: 89077

Strand: Direct

Name: 78064731

Synonym: Bcep18194_A3254

Alternate gene names: NA

Gene position: 88547-89077 (Clockwise)

Preceding gene: 78064730

Following gene: 78064734

Centisome position: 2.4

GC content: 62.9

Gene sequence:

>531_bases
ATGAGTTCACGCAGGATCGCGGTGCGCCGCTCGGGAGTACACGGCAAGGGCGTGTTCGCCGTGGCGCCGATCAAGGCCGG
CGAGCGCGTAGTGGAATACAAGGGCGAACGAATTTCGTGGAAGGAAGCGCTGCGCCGCCACCCGCACGACCCGAGCGAAC
CGAACCATACGTTCTACTTCGCACTCGACGAAGGCGGGGTGATCGACGGCAAGATCGACGGCAACAGCGCGCGCTGGATC
AACCACTCGTGCGCGCCGAACTGCGAAGCCGAGGAAGTCAAAGGCCGCGTGTACATCCACGCGCTGCGCGACATCGGGGC
GGAAGAGGAGCTGTTCTACGACTACGGCCTCGTGATCGATGCGAAGCTGACGAAGACGCTCAAGCGCGAATACGCGTGCC
ATTGCGGCGCGGCGTCGTGCCGCGGCACGCTGCTCGCGACGACCGACGAGGGCGGGAAGAAGAAAAAGAAGAAGGACAAG
AAGGACGGCAAGTCCGAGCCCCGGTCGAAGGACAAGAAAAGCAAGAAGTAA

Upstream 100 bases:

>100_bases
CCCGACGCGGCACCGACCGGTGCCGCGTTTTCGTTTTGCGCGACGCCAGGCCGCGACCGCGGCCGCCTCTATTCAAGTCG
TCTTCACAAGGATTCGTTCG

Downstream 100 bases:

>100_bases
CGCAGGCGGCGGCGCATCGTGCGCTGCCGCTGTCGTTTCAGCAGACGGCTGCCGCATCGTGCAGCCGTGCTGTCCGCCTT
CCTCATCCGGCGCGCGGCCC

Product: SET domain-containing protein

Products: NA

Alternate protein names: Histone-Lysine N-Methyltransferase; SET Domain-Containing Protein; SET Domain Protein; Set Domain Protein; HistoNe-Lysine N-Methyltransferase H3 Lysine-4 Specific; Setd1a Protein; Nuclear Protein Set; Zinc Finger Protein

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSSRRIAVRRSGVHGKGVFAVAPIKAGERVVEYKGERISWKEALRRHPHDPSEPNHTFYFALDEGGVIDGKIDGNSARWI
NHSCAPNCEAEEVKGRVYIHALRDIGAEEELFYDYGLVIDAKLTKTLKREYACHCGAASCRGTLLATTDEGGKKKKKKDK
KDGKSEPRSKDKKSKK

Sequences:

>Translated_176_residues
MSSRRIAVRRSGVHGKGVFAVAPIKAGERVVEYKGERISWKEALRRHPHDPSEPNHTFYFALDEGGVIDGKIDGNSARWI
NHSCAPNCEAEEVKGRVYIHALRDIGAEEELFYDYGLVIDAKLTKTLKREYACHCGAASCRGTLLATTDEGGKKKKKKDK
KDGKSEPRSKDKKSKK
>Mature_175_residues
SSRRIAVRRSGVHGKGVFAVAPIKAGERVVEYKGERISWKEALRRHPHDPSEPNHTFYFALDEGGVIDGKIDGNSARWIN
HSCAPNCEAEEVKGRVYIHALRDIGAEEELFYDYGLVIDAKLTKTLKREYACHCGAASCRGTLLATTDEGGKKKKKKDKK
DGKSEPRSKDKKSKK

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI56550039, Length=147, Percent_Identity=36.734693877551, Blast_Score=91, Evalue=6e-19,
Organism=Homo sapiens, GI110349788, Length=172, Percent_Identity=34.8837209302326, Blast_Score=86, Evalue=1e-17,
Organism=Homo sapiens, GI7662046, Length=144, Percent_Identity=37.5, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI55741677, Length=146, Percent_Identity=34.2465753424658, Blast_Score=83, Evalue=1e-16,
Organism=Homo sapiens, GI210032580, Length=140, Percent_Identity=37.1428571428571, Blast_Score=83, Evalue=1e-16,
Organism=Homo sapiens, GI91718902, Length=140, Percent_Identity=35.7142857142857, Blast_Score=82, Evalue=2e-16,
Organism=Homo sapiens, GI19913358, Length=137, Percent_Identity=37.956204379562, Blast_Score=75, Evalue=2e-14,
Organism=Homo sapiens, GI19913350, Length=137, Percent_Identity=37.956204379562, Blast_Score=75, Evalue=2e-14,
Organism=Homo sapiens, GI19913348, Length=137, Percent_Identity=37.956204379562, Blast_Score=75, Evalue=2e-14,
Organism=Homo sapiens, GI109633019, Length=137, Percent_Identity=37.956204379562, Blast_Score=75, Evalue=2e-14,
Organism=Homo sapiens, GI27477095, Length=144, Percent_Identity=37.5, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI13699811, Length=170, Percent_Identity=35.8823529411765, Blast_Score=70, Evalue=6e-13,
Organism=Homo sapiens, GI197313748, Length=166, Percent_Identity=33.7349397590361, Blast_Score=70, Evalue=9e-13,
Organism=Homo sapiens, GI148762969, Length=140, Percent_Identity=34.2857142857143, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI19923586, Length=144, Percent_Identity=37.5, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17552316, Length=145, Percent_Identity=37.2413793103448, Blast_Score=80, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI193210440, Length=143, Percent_Identity=34.2657342657343, Blast_Score=80, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17552320, Length=146, Percent_Identity=35.6164383561644, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17552318, Length=146, Percent_Identity=35.6164383561644, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71993684, Length=160, Percent_Identity=32.5, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI25148423, Length=112, Percent_Identity=41.9642857142857, Blast_Score=66, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI25148426, Length=112, Percent_Identity=41.9642857142857, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25141373, Length=140, Percent_Identity=34.2857142857143, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193202392, Length=140, Percent_Identity=34.2857142857143, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17565204, Length=183, Percent_Identity=30.0546448087432, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321911, Length=144, Percent_Identity=38.8888888888889, Blast_Score=97, Evalue=2e-21,
Organism=Drosophila melanogaster, GI62472551, Length=143, Percent_Identity=35.6643356643357, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI17136558, Length=143, Percent_Identity=35.6643356643357, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI19550181, Length=143, Percent_Identity=35.6643356643357, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI19550184, Length=143, Percent_Identity=35.6643356643357, Blast_Score=87, Evalue=4e-18,
Organism=Drosophila melanogaster, GI17136556, Length=143, Percent_Identity=35.6643356643357, Blast_Score=87, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24639197, Length=140, Percent_Identity=36.4285714285714, Blast_Score=81, Evalue=4e-16,
Organism=Drosophila melanogaster, GI28571451, Length=140, Percent_Identity=36.4285714285714, Blast_Score=81, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24650756, Length=177, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI17737643, Length=176, Percent_Identity=32.3863636363636, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24641786, Length=159, Percent_Identity=33.9622641509434, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281360813, Length=159, Percent_Identity=33.9622641509434, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161078181, Length=162, Percent_Identity=30.8641975308642, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19642; Mature: 19510

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50280 SET ; PS50868 POST_SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRRIAVRRSGVHGKGVFAVAPIKAGERVVEYKGERISWKEALRRHPHDPSEPNHTFYF
CCCCEEEEEECCCCCCCEEEEECCCCCCEEEECCCCEECHHHHHHCCCCCCCCCCCEEEE
ALDEGGVIDGKIDGNSARWINHSCAPNCEAEEVKGRVYIHALRDIGAEEELFYDYGLVID
EECCCCEEEEEECCCCCEEECCCCCCCCCHHHHCCEEEEEEEHHCCCCCCEEEECCEEEE
AKLTKTLKREYACHCGAASCRGTLLATTDEGGKKKKKKDKKDGKSEPRSKDKKSKK
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSRRIAVRRSGVHGKGVFAVAPIKAGERVVEYKGERISWKEALRRHPHDPSEPNHTFYF
CCCEEEEEECCCCCCCEEEEECCCCCCEEEECCCCEECHHHHHHCCCCCCCCCCCEEEE
ALDEGGVIDGKIDGNSARWINHSCAPNCEAEEVKGRVYIHALRDIGAEEELFYDYGLVID
EECCCCEEEEEECCCCCEEECCCCCCCCCHHHHCCEEEEEEEHHCCCCCCEEEECCEEEE
AKLTKTLKREYACHCGAASCRGTLLATTDEGGKKKKKKDKKDGKSEPRSKDKKSKK
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA