| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yfeJ [H]
Identifier: 78064729
GI number: 78064729
Start: 86329
End: 87039
Strand: Direct
Name: yfeJ [H]
Synonym: Bcep18194_A3252
Alternate gene names: 78064729
Gene position: 86329-87039 (Clockwise)
Preceding gene: 78064728
Following gene: 78064730
Centisome position: 2.34
GC content: 70.46
Gene sequence:
>711_bases ATGAACGCTGAAGTCGTGGCGATCCGCCACGTGCATTTCGAGGATCTCGGGAGCTTCGAGCAGGTGCTCGGCGAACGGGG TCGGCGGGTGCGCTACGTCGACGTCGGGTCGTCGCGGGTCGAGGTGCTCGACGTGCTCGAGCCGTCGCTCCTCGTCGTGC TCGGCGGGCCGATCAGCGTGTACGACGATGCGCAGTATCCGACGATCGCGCCGCTCGCGGCGCTCGTGCGCAAGCGCATC GACGCCGGGCTGCCGATCCTCGGGATTTGCCTCGGCGCGCAGTTCATCGCCCGGGCGCTCGGTGCACGTGTCTATCCGGC TGCGCAGCACGAACTCGGCTGGGCGCCGCTGACGCTCACCGACGCCGGCCGCGCATCGCCGCTGCGCCATCTCGATGGCG CGGCGACGTCGATGCTGCACTGGCATGGCGACACGTTCGACCTGCCGGGCGGGGCGATGCATCTCGCGTCGACGCCGGCC TGCCGTCACCAGGCATTCGCATGGGGCCAGCACGTGCTGGCGCTGCAATGCCATCCGGAAATCCGCACCGACCGCTTCGA ACCGTGGCTGATCGCGAACGCCGGCGAAATCGTGGCGACGCCCGGCATCGACGCGCGCCAGTTGCGTGCCGATACCGCTC AGCACGGCCCCGCGCTCGAGGCGGCCGCGCGCCGCATGTTCGCGGAGTGGCTCGACAGCGTCGGGCTCTGA
Upstream 100 bases:
>100_bases CTCGACTGCTCGGTGCAGGAAGAGGCCGACGCGGCGACGCAGAAGAAGACCTGGAAGATTTTCGCAGGCTGACGTCCGTC GATCGACCGGGAGGCCGATG
Downstream 100 bases:
>100_bases CGCCGGCGGCGGCACTGCCGTTCGCCGCGAAGGTGTTGCCCGGCCCGCATCCGTTGCAGGCCGGCGCATCGCCGTATGCG CTGCCTTTTCTCCGTTGCAG
Product: glutamine amidotransferase
Products: AMP; L-Glutamate; GMP; H+; Diphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MNAEVVAIRHVHFEDLGSFEQVLGERGRRVRYVDVGSSRVEVLDVLEPSLLVVLGGPISVYDDAQYPTIAPLAALVRKRI DAGLPILGICLGAQFIARALGARVYPAAQHELGWAPLTLTDAGRASPLRHLDGAATSMLHWHGDTFDLPGGAMHLASTPA CRHQAFAWGQHVLALQCHPEIRTDRFEPWLIANAGEIVATPGIDARQLRADTAQHGPALEAAARRMFAEWLDSVGL
Sequences:
>Translated_236_residues MNAEVVAIRHVHFEDLGSFEQVLGERGRRVRYVDVGSSRVEVLDVLEPSLLVVLGGPISVYDDAQYPTIAPLAALVRKRI DAGLPILGICLGAQFIARALGARVYPAAQHELGWAPLTLTDAGRASPLRHLDGAATSMLHWHGDTFDLPGGAMHLASTPA CRHQAFAWGQHVLALQCHPEIRTDRFEPWLIANAGEIVATPGIDARQLRADTAQHGPALEAAARRMFAEWLDSVGL >Mature_236_residues MNAEVVAIRHVHFEDLGSFEQVLGERGRRVRYVDVGSSRVEVLDVLEPSLLVVLGGPISVYDDAQYPTIAPLAALVRKRI DAGLPILGICLGAQFIARALGARVYPAAQHELGWAPLTLTDAGRASPLRHLDGAATSMLHWHGDTFDLPGGAMHLASTPA CRHQAFAWGQHVLALQCHPEIRTDRFEPWLIANAGEIVATPGIDARQLRADTAQHGPALEAAARRMFAEWLDSVGL
Specific function: Catalyzes The Synthesis Of Gmp From Xmp. [C]
COG id: COG0518
COG function: function code F; GMP synthase - Glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 6.3.5.2 [C]
Molecular weight: Translated: 25550; Mature: 25550
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAEVVAIRHVHFEDLGSFEQVLGERGRRVRYVDVGSSRVEVLDVLEPSLLVVLGGPISV CCCCEEEEEECCHHHCCHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCEEEEECCCEEE YDDAQYPTIAPLAALVRKRIDAGLPILGICLGAQFIARALGARVYPAAQHELGWAPLTLT CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEE DAGRASPLRHLDGAATSMLHWHGDTFDLPGGAMHLASTPACRHQAFAWGQHVLALQCHPE CCCCCCCHHHHCHHHHHEEEECCCCEECCCCEEEECCCCCHHHHHHHHCCEEEEEEECCC IRTDRFEPWLIANAGEIVATPGIDARQLRADTAQHGPALEAAARRMFAEWLDSVGL CCCCCCCCEEEECCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNAEVVAIRHVHFEDLGSFEQVLGERGRRVRYVDVGSSRVEVLDVLEPSLLVVLGGPISV CCCCEEEEEECCHHHCCHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCEEEEECCCEEE YDDAQYPTIAPLAALVRKRIDAGLPILGICLGAQFIARALGARVYPAAQHELGWAPLTLT CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEE DAGRASPLRHLDGAATSMLHWHGDTFDLPGGAMHLASTPACRHQAFAWGQHVLALQCHPE CCCCCCCHHHHCHHHHHEEEECCCCEECCCCEEEECCCCCHHHHHHHHCCEEEEEEECCC IRTDRFEPWLIANAGEIVATPGIDARQLRADTAQHGPALEAAARRMFAEWLDSVGL CCCCCCCCEEEECCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 2 {1-ribosyl-4,6-dihydroxypyrazolo[3,4-d]-pyrimidine} 1 {NH4+}} 0.058 {XMP}} 0.029 {XMP}} 0.42 {6-thioXMP}} 0.53 {ATP}} 0.35 {8-azaXMP}} [C]
Substrates: ATP; L-Glutamine; H2O; Xanthosine 5'-phosphate [C]
Specific reaction: ATP + L-Glutamine + H2O + Xanthosine 5'-phosphate --> AMP + L-Glutamate + GMP + (2) H+ + Diphosphate [C]
General reaction: Amination [C]
Inhibitor: 1, N6-Ethenoadenosine; 1-Methyl adenosine 5'-phosphate 5'-phosphate; 2', 3'-Dihydroadenosine; 2'-Deoxyadenosine; 2, 6-Diaminopurine ribonucleoside; 2-Amino-6-methyl thiopurine ribonucleoside; 2-Fluoroadenosine; 3'-Deoxyadenosine; 5'-Azido-5'-deoxyadenosin
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7612925; 11677609 [H]