| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78064670
Identifier: 78064670
GI number: 78064670
Start: 18405
End: 20366
Strand: Direct
Name: 78064670
Synonym: Bcep18194_A3193
Alternate gene names: NA
Gene position: 18405-20366 (Clockwise)
Preceding gene: 78064669
Following gene: 78064671
Centisome position: 0.5
GC content: 53.92
Gene sequence:
>1962_bases GTGAGCGAGCTCTACGTAGGAAAACGTCTCGACCCAAATGGGATGCCAGGAGCGCCGTATCTTCACAAACTAAGTGACCT TATCACTCACACTTTCATTTGTGGCGGCTCAGGCTCCGGCAAAACGGTAATGGGCAAAGCCATCATTGAGGAAGCAGCCC TCAATGAGGTTCCCTCGATTATCGTGGATCTCAAAGGCGATTTGTCTTCCTTGGCGCTTGCTTTCGGTGAATTGGCGGCC CCGGCTGTTGCACCGTGGATCGAGGTTGAGGATAAGTCAACGCTTGGCCGCGCCGCATTGGCGGAAGCCAACACCTTACG GAAACGGTTATGGGATTGGGGGCTCGCCGAAACCAACGTGCGGGCGTTTTCCAACCGGGTAGCCGTTGAAATTTTTACCC CCCGCAGCGAACTCGGCCGCCGGGTATCAATTCCGCTCATTTCTTCGCCGCCACCGGACATCAACAAGCTATTTGACGAG GACCCGGATACGGCTTCGGTCATGGTGACCAGCATTGCGGAGGCGCTAGTGCGCCGGGTGATCCCCTCGGGGCAGAGGGA CCGGGAAACTGATTTTGTCACCGCTCTCATCGAGCACGCTTGGCGTACAGGCGTTGACCTTGCCGGTGAGGCTGGTTTGG GCCAACTGGTATCCATGATTCTAGAGCCGCCGTTTGAAACTATTGGCGTACTGAGTATTGGTGACCATATTCCCGAAAGC CGGCGTCAAAAGCTTGCGCAAGCGGTAAACGGGCAGCTCGTCGGCGCTGCAGCCAACTGGGTCCGTGGCGAAGAAATGAG CATCGACAAACTAGTGGGATCTAACCGTGTCGATGGCAAAACGCAGATCAGTGTTATCAATCTCTCGCACATTACCGACT TCGAGGACCAGAGCTTCGTAGTTGCCCAAATCGCCTTTTCCATCAACGCCTGGATGCGCAAGCAGGGGAGTGCTCCTGGT GGAAACAGACCGCGCCTATTGTTCTTCCTGGATGAGATCGGCGGTGGCGGTGGAAAGACCGCTTTCTATCCGACGTACCC CTACACATCCACCTGCAAACCCGCCCTAAATATTCTGGTCAAGCAAGGCCGCGCTTTTGGTGTCGGCTGCATCTTGGCAA CGCAGAACCCTGGGGATATTGACTATAAAGGCCTTTCAAACTGCGCCACTTGGATCGTCGGGAAACTTCAGACCAAAAGA GATCGTGACAAAGTACGTGAGGGGCTGACCGATGCAGAATTTTCACCCTCCGATTTGGCCAGAAAGCTAGCTCGCCCTAA GACGGGGGAGTTTATGCTTCTCAACAAGGACGGCGATGTCCATTTCATCAAAGAACGTTGGCTCCTGACTTACCACTGCA CGCTGAGCCCAGAGCAACTTCGCCGCTATAAAGCCAAGGGGCTTGCTCCCTATGAGGGCTCACTGAATACTGACATTTTC GAAGAGACCACCGAATTCGACGAGCAGGAAGAAGCTCAATCGCTTTGGAACGACGCGAAGGATACTATCGGTCAAGCCTG CAATCTGCTTGAAAAAATTCTGGATCACGACATTAACTCGGAAAAAGCGCGACTTTGGTTATCCATCTTGCGTGACCCAG ATGGATTCAACCGACGCCTTGTAGAAACCCAAAGGCAGCTTGCCGAGTATGCGGAGGCGGTTTTCCCCAAGAGCACCAAG GCCCCTGAGCCCAGCGGTTTGCTAACATTGCTTTCTGAAATGAAAAGTACGGGTCAAAGCCCTTCGTTCAACGTTACTCG AACGGTGCCGGGACCCGCTTCAGCGCCGCCAGCCGGCGATAGCGTTCTTGTCGAGGATGACGGTAGTGTCGCCTACAAGG GACGCAGATATTCGCTATACAGAAGGTATGCGGGAAAGTCGGTGACCTTCATCGAGGAAGATGGGGAGTTGAAATTTGCA ATCGAAGGGAAGGTTTTGTCAAAGACCTTCCGTTTGGTATAA
Upstream 100 bases:
>100_bases CAAATGGCGACCCGCTCAAGGAAAACGATCTCCCGTTCATTCTTGAAAAATACCGCGAATGGCAAACGGGAACGCTTGAA CTCCAGAAGGAGGATAGCGA
Downstream 100 bases:
>100_bases GGTGGGGCCGAGCAGCAGCATTGGCTGACGGCGGAATGATGGCACGCTCAGTCTGTCAAAAAATGCCGCTCGTACAGGCG GCGTTAATGCCCCGGCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 653; Mature: 652
Protein sequence:
>653_residues MSELYVGKRLDPNGMPGAPYLHKLSDLITHTFICGGSGSGKTVMGKAIIEEAALNEVPSIIVDLKGDLSSLALAFGELAA PAVAPWIEVEDKSTLGRAALAEANTLRKRLWDWGLAETNVRAFSNRVAVEIFTPRSELGRRVSIPLISSPPPDINKLFDE DPDTASVMVTSIAEALVRRVIPSGQRDRETDFVTALIEHAWRTGVDLAGEAGLGQLVSMILEPPFETIGVLSIGDHIPES RRQKLAQAVNGQLVGAAANWVRGEEMSIDKLVGSNRVDGKTQISVINLSHITDFEDQSFVVAQIAFSINAWMRKQGSAPG GNRPRLLFFLDEIGGGGGKTAFYPTYPYTSTCKPALNILVKQGRAFGVGCILATQNPGDIDYKGLSNCATWIVGKLQTKR DRDKVREGLTDAEFSPSDLARKLARPKTGEFMLLNKDGDVHFIKERWLLTYHCTLSPEQLRRYKAKGLAPYEGSLNTDIF EETTEFDEQEEAQSLWNDAKDTIGQACNLLEKILDHDINSEKARLWLSILRDPDGFNRRLVETQRQLAEYAEAVFPKSTK APEPSGLLTLLSEMKSTGQSPSFNVTRTVPGPASAPPAGDSVLVEDDGSVAYKGRRYSLYRRYAGKSVTFIEEDGELKFA IEGKVLSKTFRLV
Sequences:
>Translated_653_residues MSELYVGKRLDPNGMPGAPYLHKLSDLITHTFICGGSGSGKTVMGKAIIEEAALNEVPSIIVDLKGDLSSLALAFGELAA PAVAPWIEVEDKSTLGRAALAEANTLRKRLWDWGLAETNVRAFSNRVAVEIFTPRSELGRRVSIPLISSPPPDINKLFDE DPDTASVMVTSIAEALVRRVIPSGQRDRETDFVTALIEHAWRTGVDLAGEAGLGQLVSMILEPPFETIGVLSIGDHIPES RRQKLAQAVNGQLVGAAANWVRGEEMSIDKLVGSNRVDGKTQISVINLSHITDFEDQSFVVAQIAFSINAWMRKQGSAPG GNRPRLLFFLDEIGGGGGKTAFYPTYPYTSTCKPALNILVKQGRAFGVGCILATQNPGDIDYKGLSNCATWIVGKLQTKR DRDKVREGLTDAEFSPSDLARKLARPKTGEFMLLNKDGDVHFIKERWLLTYHCTLSPEQLRRYKAKGLAPYEGSLNTDIF EETTEFDEQEEAQSLWNDAKDTIGQACNLLEKILDHDINSEKARLWLSILRDPDGFNRRLVETQRQLAEYAEAVFPKSTK APEPSGLLTLLSEMKSTGQSPSFNVTRTVPGPASAPPAGDSVLVEDDGSVAYKGRRYSLYRRYAGKSVTFIEEDGELKFA IEGKVLSKTFRLV >Mature_652_residues SELYVGKRLDPNGMPGAPYLHKLSDLITHTFICGGSGSGKTVMGKAIIEEAALNEVPSIIVDLKGDLSSLALAFGELAAP AVAPWIEVEDKSTLGRAALAEANTLRKRLWDWGLAETNVRAFSNRVAVEIFTPRSELGRRVSIPLISSPPPDINKLFDED PDTASVMVTSIAEALVRRVIPSGQRDRETDFVTALIEHAWRTGVDLAGEAGLGQLVSMILEPPFETIGVLSIGDHIPESR RQKLAQAVNGQLVGAAANWVRGEEMSIDKLVGSNRVDGKTQISVINLSHITDFEDQSFVVAQIAFSINAWMRKQGSAPGG NRPRLLFFLDEIGGGGGKTAFYPTYPYTSTCKPALNILVKQGRAFGVGCILATQNPGDIDYKGLSNCATWIVGKLQTKRD RDKVREGLTDAEFSPSDLARKLARPKTGEFMLLNKDGDVHFIKERWLLTYHCTLSPEQLRRYKAKGLAPYEGSLNTDIFE ETTEFDEQEEAQSLWNDAKDTIGQACNLLEKILDHDINSEKARLWLSILRDPDGFNRRLVETQRQLAEYAEAVFPKSTKA PEPSGLLTLLSEMKSTGQSPSFNVTRTVPGPASAPPAGDSVLVEDDGSVAYKGRRYSLYRRYAGKSVTFIEEDGELKFAI EGKVLSKTFRLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71617; Mature: 71486
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELYVGKRLDPNGMPGAPYLHKLSDLITHTFICGGSGSGKTVMGKAIIEEAALNEVPSI CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCEEHHHHHHHHHHHHHHCEE IVDLKGDLSSLALAFGELAAPAVAPWIEVEDKSTLGRAALAEANTLRKRLWDWGLAETNV EEECCCCHHHHHHHHHHHHCCHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH RAFSNRVAVEIFTPRSELGRRVSIPLISSPPPDINKLFDEDPDTASVMVTSIAEALVRRV HHHCCCEEEEEECCHHHHCCEEECEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH IPSGQRDRETDFVTALIEHAWRTGVDLAGEAGLGQLVSMILEPPFETIGVLSIGDHIPES CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHEEEEHHCCCCCHH RRQKLAQAVNGQLVGAAANWVRGEEMSIDKLVGSNRVDGKTQISVINLSHITDFEDQSFV HHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHHCCCCCCCCEEEEEEEEHHCCCCCCCCEE VAQIAFSINAWMRKQGSAPGGNRPRLLFFLDEIGGGGGKTAFYPTYPYTSTCKPALNILV EHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCEECCCCCCCCCHHHHHHHH KQGRAFGVGCILATQNPGDIDYKGLSNCATWIVGKLQTKRDRDKVREGLTDAEFSPSDLA HCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH RKLARPKTGEFMLLNKDGDVHFIKERWLLTYHCTLSPEQLRRYKAKGLAPYEGSLNTDIF HHHHCCCCCCEEEEECCCCEEEEEECEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHH EETTEFDEQEEAQSLWNDAKDTIGQACNLLEKILDHDINSEKARLWLSILRDPDGFNRRL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHH VETQRQLAEYAEAVFPKSTKAPEPSGLLTLLSEMKSTGQSPSFNVTRTVPGPASAPPAGD HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCC SVLVEDDGSVAYKGRRYSLYRRYAGKSVTFIEEDGELKFAIEGKVLSKTFRLV EEEEECCCCEEECCCHHHHHHHHCCCEEEEEECCCCEEEEECCHHHHHHHHCC >Mature Secondary Structure SELYVGKRLDPNGMPGAPYLHKLSDLITHTFICGGSGSGKTVMGKAIIEEAALNEVPSI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCEEHHHHHHHHHHHHHHCEE IVDLKGDLSSLALAFGELAAPAVAPWIEVEDKSTLGRAALAEANTLRKRLWDWGLAETNV EEECCCCHHHHHHHHHHHHCCHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH RAFSNRVAVEIFTPRSELGRRVSIPLISSPPPDINKLFDEDPDTASVMVTSIAEALVRRV HHHCCCEEEEEECCHHHHCCEEECEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH IPSGQRDRETDFVTALIEHAWRTGVDLAGEAGLGQLVSMILEPPFETIGVLSIGDHIPES CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHEEEEHHCCCCCHH RRQKLAQAVNGQLVGAAANWVRGEEMSIDKLVGSNRVDGKTQISVINLSHITDFEDQSFV HHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHHCCCCCCCCEEEEEEEEHHCCCCCCCCEE VAQIAFSINAWMRKQGSAPGGNRPRLLFFLDEIGGGGGKTAFYPTYPYTSTCKPALNILV EHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCEECCCCCCCCCHHHHHHHH KQGRAFGVGCILATQNPGDIDYKGLSNCATWIVGKLQTKRDRDKVREGLTDAEFSPSDLA HCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH RKLARPKTGEFMLLNKDGDVHFIKERWLLTYHCTLSPEQLRRYKAKGLAPYEGSLNTDIF HHHHCCCCCCEEEEECCCCEEEEEECEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHH EETTEFDEQEEAQSLWNDAKDTIGQACNLLEKILDHDINSEKARLWLSILRDPDGFNRRL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHH VETQRQLAEYAEAVFPKSTKAPEPSGLLTLLSEMKSTGQSPSFNVTRTVPGPASAPPAGD HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCC SVLVEDDGSVAYKGRRYSLYRRYAGKSVTFIEEDGELKFAIEGKVLSKTFRLV EEEEECCCCEEECCCHHHHHHHHCCCEEEEEECCCCEEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA