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The map label for this gene is rdgC

Identifier: 161702958

GI number: 161702958

Start: 2245243

End: 2246166

Strand: Direct

Name: rdgC

Synonym: Bcep18194_A5201

Alternate gene names: 161702958

Gene position: 2245243-2246166 (Clockwise)

Preceding gene: 78066665

Following gene: 78066672

Centisome position: 60.78

GC content: 62.45

Gene sequence:

>924_bases
ATGTGGTTCAAGAACCTTCAGCTTCATCGTCTTCCGGCACCTTGGGCCGTTACCCCCGATCAGATGGAAAAATGGCTGGC
GCCCCACGCGTTTCAGCCGGGCAGCAGCGTCGAGATGCAGAGCCACGGATGGGCGTCGCCGCGTGACGACGGCGCACTGG
TGTATTCGATCAACCGGCAAATGTTGCTGACGTTTCGTGCCGAAAAGAAGCTGCTCCCGGCGTCGGTCGTCAATCAGGTG
ACCAAGGAGCGAGCGCTCGAAGTCGAGGAGCAGCAGGGCTTCAAGGTAGGGCGAAAGCAGATGCGCGAACTCAAGGAGCA
GGTGACCGACGAACTGCTCCCGCGTGCGTTCACCATTCGCCGCGACACCCGCGTGTGGATCGATACGGTGAACGGCTGGC
TCGTCATCGATGCGGCTTCACAGGCTGTTGCCGACGATGTTCGCGGCCTGCTCGTCAAATCGATCGATCAGTTGCCGCTC
GCCGGTGTTCAGGTGGCACATTCGCCGGTCGCCGCGATGACGGATTGGCTGTTGTCCGGCGAGGCGCCGGGCGGATTCAC
CGTGGACCAGGACGCCGAGTTGCGCTCGAGCGGCGAAGGCGGCGCCACGGTGCGATACGTCGGCCACGCGCTGGAAGCGA
ACGACATGCGCCGGCACATCGAGGCCGGCAAACAATGCATGCGCCTTGCGATGACCTGGGACAACCGGATCTCCTTCGTG
TTGACGCCGTCGTTGACGATCAAGCGCGTTACGCCGCTCGACGTAATCAAGGAAGCGGCGGATCCGACCGCGCAGAACGA
CGCTGAACGCTTCGACTCGGATGTCACGCTCATGACCGGTGAATTGGGGCGGATGCTCACCAGTCTCATCGATATCCTGG
GTGGCGAGCAGCACAACTCGCTTCATCAGGCGGCAGCAGCCTGA

Upstream 100 bases:

>100_bases
GTGCTACAACCGCCAACGACTTGAACCGTCGCACCGATCGACCGAATCCGCACCGGAAGCATCACCGTCATATAGAATGG
TGCGCTTTGCCCGTACTCCT

Downstream 100 bases:

>100_bases
ACGCCGTCGGCAGCCGCGAAACCTCCCCGCGACGGCGAGGTTTCGCGCCGGCGCGACAGTACAACGAGGACTGTCGTCGC
CCTGTCGGAGGGTCACGACC

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MWFKNLQLHRLPAPWAVTPDQMEKWLAPHAFQPGSSVEMQSHGWASPRDDGALVYSINRQMLLTFRAEKKLLPASVVNQV
TKERALEVEEQQGFKVGRKQMRELKEQVTDELLPRAFTIRRDTRVWIDTVNGWLVIDAASQAVADDVRGLLVKSIDQLPL
AGVQVAHSPVAAMTDWLLSGEAPGGFTVDQDAELRSSGEGGATVRYVGHALEANDMRRHIEAGKQCMRLAMTWDNRISFV
LTPSLTIKRVTPLDVIKEAADPTAQNDAERFDSDVTLMTGELGRMLTSLIDILGGEQHNSLHQAAAA

Sequences:

>Translated_307_residues
MWFKNLQLHRLPAPWAVTPDQMEKWLAPHAFQPGSSVEMQSHGWASPRDDGALVYSINRQMLLTFRAEKKLLPASVVNQV
TKERALEVEEQQGFKVGRKQMRELKEQVTDELLPRAFTIRRDTRVWIDTVNGWLVIDAASQAVADDVRGLLVKSIDQLPL
AGVQVAHSPVAAMTDWLLSGEAPGGFTVDQDAELRSSGEGGATVRYVGHALEANDMRRHIEAGKQCMRLAMTWDNRISFV
LTPSLTIKRVTPLDVIKEAADPTAQNDAERFDSDVTLMTGELGRMLTSLIDILGGEQHNSLHQAAAA
>Mature_307_residues
MWFKNLQLHRLPAPWAVTPDQMEKWLAPHAFQPGSSVEMQSHGWASPRDDGALVYSINRQMLLTFRAEKKLLPASVVNQV
TKERALEVEEQQGFKVGRKQMRELKEQVTDELLPRAFTIRRDTRVWIDTVNGWLVIDAASQAVADDVRGLLVKSIDQLPL
AGVQVAHSPVAAMTDWLLSGEAPGGFTVDQDAELRSSGEGGATVRYVGHALEANDMRRHIEAGKQCMRLAMTWDNRISFV
LTPSLTIKRVTPLDVIKEAADPTAQNDAERFDSDVTLMTGELGRMLTSLIDILGGEQHNSLHQAAAA

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=299, Percent_Identity=37.123745819398, Blast_Score=205, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 34053; Mature: 34053

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFKNLQLHRLPAPWAVTPDQMEKWLAPHAFQPGSSVEMQSHGWASPRDDGALVYSINRQ
CCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCE
MLLTFRAEKKLLPASVVNQVTKERALEVEEQQGFKVGRKQMRELKEQVTDELLPRAFTIR
EEEEEHHHHCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHEEEE
RDTRVWIDTVNGWLVIDAASQAVADDVRGLLVKSIDQLPLAGVQVAHSPVAAMTDWLLSG
CCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHCC
EAPGGFTVDQDAELRSSGEGGATVRYVGHALEANDMRRHIEAGKQCMRLAMTWDNRISFV
CCCCCCCCCCCCHHHCCCCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
LTPSLTIKRVTPLDVIKEAADPTAQNDAERFDSDVTLMTGELGRMLTSLIDILGGEQHNS
ECCCCEEEECCHHHHHHHHCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCH
LHQAAAA
HHHHHCC
>Mature Secondary Structure
MWFKNLQLHRLPAPWAVTPDQMEKWLAPHAFQPGSSVEMQSHGWASPRDDGALVYSINRQ
CCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCE
MLLTFRAEKKLLPASVVNQVTKERALEVEEQQGFKVGRKQMRELKEQVTDELLPRAFTIR
EEEEEHHHHCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHEEEE
RDTRVWIDTVNGWLVIDAASQAVADDVRGLLVKSIDQLPLAGVQVAHSPVAAMTDWLLSG
CCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHCC
EAPGGFTVDQDAELRSSGEGGATVRYVGHALEANDMRRHIEAGKQCMRLAMTWDNRISFV
CCCCCCCCCCCCHHHCCCCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
LTPSLTIKRVTPLDVIKEAADPTAQNDAERFDSDVTLMTGELGRMLTSLIDILGGEQHNS
ECCCCEEEECCHHHHHHHHCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCH
LHQAAAA
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA