| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066672
Identifier: 78066672
GI number: 78066672
Start: 2247816
End: 2250146
Strand: Direct
Name: 78066672
Synonym: Bcep18194_A5203
Alternate gene names: NA
Gene position: 2247816-2250146 (Clockwise)
Preceding gene: 161702958
Following gene: 78066678
Centisome position: 60.85
GC content: 69.15
Gene sequence:
>2331_bases GTGTCTCGGATTCATCTGCGCCGGCCTGCTCGCGGCCTGCAACGACGACGACGTCAAATCGAGCAACCCGCCGTCGAACA CTGCCGCGCTGTCGTTCCGCATGGACACCGGCGGCCAGATCAACGCGTTCTACCGGCAGGACAAGGTCGCCGCGCACCTG CTGGTGCGCTCGTCGACGAAGCCGCGCCTGCTCGTCGTGTTCCCCGCCGGCAACAGCGGCACCGGGCTGTGGTTCGACGA CACTGCACAGCCGGTGAACTGGAGCCTCGATACGTCGCCGTCTGCGCTATCGGCTCCCGACGCGCACGGCCGCCCGCTGT ACGGCATCGGCGCCGACGTGTCGGTCGACACCGCCACGCTGACGATCCGCCAGGGCGTGCTCAGCAACGTGCGCTTCCTG CGCGACTTCAACGGCGGCGCGACGATTCCGCAGCAGATCCTCACCGCGCCGACGGTCCAGGGCAGCGCCGCGCAATGGCA ACGCGACCGGATCGACGGCGCGCCCGGCTATTCACTGCGCATCACGCTGCGCGACGGCGGCGGCAGCATTACGCCGGCAG CGGACGGCAAGCTCGTCCTGAGCGCACCCGCGGGCTCGCATACGCTGCGGCTGCATATCGATGCGCTGTCGGGCGAGACG CCGTTGTCGCCGATCACGCACGCCGACCTGCTCGCGCCGTCCGTGAACCCCGACCCCGTGAGCCAGAACGTGCTCGAGTT CCTGAGCTTCCACGACAAGCTGCTGGCCGGCTCGTGGCAGTACGACACCTACTTCGGCCGCGACACGCTGATCTCGGTGC GCATGCTGATGCCCGTGCTCGAACCCGCGGCGGTCGAGGCCGGCCTGTCGTCGGTGCTGAGCCGGCTGTCGACCGACGGC AAGGTCGCGCACGAGGAAGGGATCGGCGAATTCGCCCTCGTCGACAACCAGAAGAACGGGCGGCCGAACGATCCGACGCC GACCTACGACTACAAGATGATCGACAGCGACTATCTGCTCGCGCCGATCGCGGCCGCGTGGCTGATCGACGATACGCGCG GCCAGGCCCGCGCGGCCGCGTATCTCGCGCAGCGCGGCAGCGACGGGCAGACCAATGGCAGCCGCCTGGTCGTCAACCTG CTGCACGTCGCGACGACCGCACAGCCGTTCGCGCAGCAGCCGTCGGTCGCGAACCTGATCCACCTGCGGCCCGGCGAGAT CGTCGGCAACTGGCGCGACAGCACCGACGGGCTCGGCGGCGGCGTCTACCCGTACGACGTGAACGCGGTGCTCGTGCCGG CTGCGTTGCGCGCAGCGAACGCATTCCTCACGCGCGGCCTGCTCGATCCGTATCTGGATGCCGGACAGCGCGCGACGCTC GCCAACACGGCGAACCAGGCGGCGACGTGGGAAACGCAGGCACCGCCGCTGTTCCAGGTCAGCGTGCCGGCCGCGCAGGC AGCCACCGACGTGTCGGCCTATGCGCCATCCGCTGGTGTGCCGACCGGCGCCGCGCCAGGCACGCCGCTGGCGTTCTACG CGCTGTCGCTCGATCAGCAGGGCAACCCGATTCCGGTGATGAATTCGGACGGCGGCTTCGCGCTGCTGTTCGGCACGCCG CCGGACAACGAACTTCAGCGGATCGTCGCCGACGTCACGCGGCCGTTCCCGACCGGGCTCGTGACCGATGCCGGCATGCT GATCGCGAATCCCGCGTATGCCAGCCAGGCGCTGTGGCCGAAGTTTACGAGTTCCGCATATCACGGCACGGTGATCTGGT CGTGGCAGCAGGCGATGTGGGTAGCCGGGCTCGATCGCCAGCTCGCGCGCCAGGACCTGTCGGCCGCGACACGCACGCTG CTCACGCAGGCGCGGCAGACGATCTGGCAGGTGATCTCGAACGGACGCGACATGCGCACGTCGGAGATGTGGACGTGGTC GTACGTGAACGGCAAGTACCAGACCGATGCATTCGGCACGCGCAGCGCGGACGCCACCGAGGCGAACGCGGCGCAGCTCT GGAGTACGACGTATCTCGCGATCCGCGATCCGCAGCAGCGCGCGGGCAAGTACTGGTGGCAGGCGTCGCAGCGGATGCAG GATGCGCAGCCGAAGCAGAGCGCGGCGGCCCTGGCATCGCGGTAACGCATCACCGGACGCGTGCTGATCGGGCATGCAAA AGCCCCGGGGGCGTTACCGCCTCCGGGGCTTCGTTAGAGATCGAGGCGCGCGACACCGCCGCTGTACGCCCGAGTTGCCG AATGTCCCGCGCCCGGTCACCGGTACCTGCGTGCCGCGCAAACCGCTGTCACCGCGACACGACCCGGTTCCGCCCTTCAC GTTTCGCCTGA
Upstream 100 bases:
>100_bases ACCGGATGAAGCAAGCCGAGCAGCCGCTCACTCGATAATTCTCATAAAAATCGCCAGTCATCAGGAGGGACATCAACATG CATCGCCTTGCGAAGTCGCT
Downstream 100 bases:
>100_bases TACAAGCGTTCGTCGACCACGCGCAGCAACGCATCCACCGTGCTGCCGTCGGCCCCGTATTGCGCGACACCCACGCTGAC CGTCACCTGTACGCGCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 776; Mature: 775
Protein sequence:
>776_residues MSRIHLRRPARGLQRRRRQIEQPAVEHCRAVVPHGHRRPDQRVLPAGQGRRAPAGALVDEAAPARRVPRRQQRHRAVVRR HCTAGELEPRYVAVCAIGSRRARPPAVRHRRRRVGRHRHADDPPGRAQQRALPARLQRRRDDSAADPHRADGPGQRRAMA TRPDRRRARLFTAHHAARRRRQHYAGSGRQARPERTRGLAYAAAAYRCAVGRDAVVADHARRPARAVREPRPREPERARV PELPRQAAGRLVAVRHLLRPRHADLGAHADARARTRGGRGRPVVGAEPAVDRRQGRARGRDRRIRPRRQPEERAAERSDA DLRLQDDRQRLSARADRGRVADRRYARPGPRGRVSRAARQRRADQWQPPGRQPAARRDDRTAVRAAAVGREPDPPAARRD RRQLARQHRRARRRRLPVRRERGARAGCVARSERIPHARPARSVSGCRTARDARQHGEPGGDVGNAGTAAVPGQRAGRAG SHRRVGLCAIRWCADRRRARHAAGVLRAVARSAGQPDSGDEFGRRLRAAVRHAAGQRTSADRRRRHAAVPDRARDRCRHA DRESRVCQPGAVAEVYEFRISRHGDLVVAAGDVGSRARSPARAPGPVGRDTHAAHAGAADDLAGDLERTRHAHVGDVDVV VRERQVPDRCIRHAQRGRHRGERGAALEYDVSRDPRSAAARGQVLVAGVAADAGCAAEAERGGPGIAVTHHRTRADRACK SPGGVTASGASLEIEARDTAAVRPSCRMSRARSPVPACRANRCHRDTTRFRPSRFA
Sequences:
>Translated_776_residues MSRIHLRRPARGLQRRRRQIEQPAVEHCRAVVPHGHRRPDQRVLPAGQGRRAPAGALVDEAAPARRVPRRQQRHRAVVRR HCTAGELEPRYVAVCAIGSRRARPPAVRHRRRRVGRHRHADDPPGRAQQRALPARLQRRRDDSAADPHRADGPGQRRAMA TRPDRRRARLFTAHHAARRRRQHYAGSGRQARPERTRGLAYAAAAYRCAVGRDAVVADHARRPARAVREPRPREPERARV PELPRQAAGRLVAVRHLLRPRHADLGAHADARARTRGGRGRPVVGAEPAVDRRQGRARGRDRRIRPRRQPEERAAERSDA DLRLQDDRQRLSARADRGRVADRRYARPGPRGRVSRAARQRRADQWQPPGRQPAARRDDRTAVRAAAVGREPDPPAARRD RRQLARQHRRARRRRLPVRRERGARAGCVARSERIPHARPARSVSGCRTARDARQHGEPGGDVGNAGTAAVPGQRAGRAG SHRRVGLCAIRWCADRRRARHAAGVLRAVARSAGQPDSGDEFGRRLRAAVRHAAGQRTSADRRRRHAAVPDRARDRCRHA DRESRVCQPGAVAEVYEFRISRHGDLVVAAGDVGSRARSPARAPGPVGRDTHAAHAGAADDLAGDLERTRHAHVGDVDVV VRERQVPDRCIRHAQRGRHRGERGAALEYDVSRDPRSAAARGQVLVAGVAADAGCAAEAERGGPGIAVTHHRTRADRACK SPGGVTASGASLEIEARDTAAVRPSCRMSRARSPVPACRANRCHRDTTRFRPSRFA >Mature_775_residues SRIHLRRPARGLQRRRRQIEQPAVEHCRAVVPHGHRRPDQRVLPAGQGRRAPAGALVDEAAPARRVPRRQQRHRAVVRRH CTAGELEPRYVAVCAIGSRRARPPAVRHRRRRVGRHRHADDPPGRAQQRALPARLQRRRDDSAADPHRADGPGQRRAMAT RPDRRRARLFTAHHAARRRRQHYAGSGRQARPERTRGLAYAAAAYRCAVGRDAVVADHARRPARAVREPRPREPERARVP ELPRQAAGRLVAVRHLLRPRHADLGAHADARARTRGGRGRPVVGAEPAVDRRQGRARGRDRRIRPRRQPEERAAERSDAD LRLQDDRQRLSARADRGRVADRRYARPGPRGRVSRAARQRRADQWQPPGRQPAARRDDRTAVRAAAVGREPDPPAARRDR RQLARQHRRARRRRLPVRRERGARAGCVARSERIPHARPARSVSGCRTARDARQHGEPGGDVGNAGTAAVPGQRAGRAGS HRRVGLCAIRWCADRRRARHAAGVLRAVARSAGQPDSGDEFGRRLRAAVRHAAGQRTSADRRRRHAAVPDRARDRCRHAD RESRVCQPGAVAEVYEFRISRHGDLVVAAGDVGSRARSPARAPGPVGRDTHAAHAGAADDLAGDLERTRHAHVGDVDVVV RERQVPDRCIRHAQRGRHRGERGAALEYDVSRDPRSAAARGQVLVAGVAADAGCAAEAERGGPGIAVTHHRTRADRACKS PGGVTASGASLEIEARDTAAVRPSCRMSRARSPVPACRANRCHRDTTRFRPSRFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86191; Mature: 86060
Theoretical pI: Translated: 12.42; Mature: 12.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIHLRRPARGLQRRRRQIEQPAVEHCRAVVPHGHRRPDQRVLPAGQGRRAPAGALVDE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AAPARRVPRRQQRHRAVVRRHCTAGELEPRYVAVCAIGSRRARPPAVRHRRRRVGRHRHA CCCHHHCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCC DDPPGRAQQRALPARLQRRRDDSAADPHRADGPGQRRAMATRPDRRRARLFTAHHAARRR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHH RQHYAGSGRQARPERTRGLAYAAAAYRCAVGRDAVVADHARRPARAVREPRPREPERARV HHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCC PELPRQAAGRLVAVRHLLRPRHADLGAHADARARTRGGRGRPVVGAEPAVDRRQGRARGR CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCCC DRRIRPRRQPEERAAERSDADLRLQDDRQRLSARADRGRVADRRYARPGPRGRVSRAARQ CCCCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHH RRADQWQPPGRQPAARRDDRTAVRAAAVGREPDPPAARRDRRQLARQHRRARRRRLPVRR HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH ERGARAGCVARSERIPHARPARSVSGCRTARDARQHGEPGGDVGNAGTAAVPGQRAGRAG HCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCC SHRRVGLCAIRWCADRRRARHAAGVLRAVARSAGQPDSGDEFGRRLRAAVRHAAGQRTSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHH DRRRRHAAVPDRARDRCRHADRESRVCQPGAVAEVYEFRISRHGDLVVAAGDVGSRARSP HHHHHHCCCCHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHCCCC ARAPGPVGRDTHAAHAGAADDLAGDLERTRHAHVGDVDVVVRERQVPDRCIRHAQRGRHR CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHCC GERGAALEYDVSRDPRSAAARGQVLVAGVAADAGCAAEAERGGPGIAVTHHRTRADRACK CCCCCEEEECCCCCCHHHHHCCCEEEEEECCCCCCHHHHHCCCCCEEEECCHHHHHHHHC SPGGVTASGASLEIEARDTAAVRPSCRMSRARSPVPACRANRCHRDTTRFRPSRFA CCCCCEECCCEEEEECCCCHHCCCHHHHHHCCCCCCHHHHCCCHHHHHHCCCCCCC >Mature Secondary Structure SRIHLRRPARGLQRRRRQIEQPAVEHCRAVVPHGHRRPDQRVLPAGQGRRAPAGALVDE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AAPARRVPRRQQRHRAVVRRHCTAGELEPRYVAVCAIGSRRARPPAVRHRRRRVGRHRHA CCCHHHCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCC DDPPGRAQQRALPARLQRRRDDSAADPHRADGPGQRRAMATRPDRRRARLFTAHHAARRR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHH RQHYAGSGRQARPERTRGLAYAAAAYRCAVGRDAVVADHARRPARAVREPRPREPERARV HHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCC PELPRQAAGRLVAVRHLLRPRHADLGAHADARARTRGGRGRPVVGAEPAVDRRQGRARGR CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCCC DRRIRPRRQPEERAAERSDADLRLQDDRQRLSARADRGRVADRRYARPGPRGRVSRAARQ CCCCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHH RRADQWQPPGRQPAARRDDRTAVRAAAVGREPDPPAARRDRRQLARQHRRARRRRLPVRR HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH ERGARAGCVARSERIPHARPARSVSGCRTARDARQHGEPGGDVGNAGTAAVPGQRAGRAG HCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCC SHRRVGLCAIRWCADRRRARHAAGVLRAVARSAGQPDSGDEFGRRLRAAVRHAAGQRTSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHH DRRRRHAAVPDRARDRCRHADRESRVCQPGAVAEVYEFRISRHGDLVVAAGDVGSRARSP HHHHHHCCCCHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHCCCC ARAPGPVGRDTHAAHAGAADDLAGDLERTRHAHVGDVDVVVRERQVPDRCIRHAQRGRHR CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHCC GERGAALEYDVSRDPRSAAARGQVLVAGVAADAGCAAEAERGGPGIAVTHHRTRADRACK CCCCCEEEECCCCCCHHHHHCCCEEEEEECCCCCCHHHHHCCCCCEEEECCHHHHHHHHC SPGGVTASGASLEIEARDTAAVRPSCRMSRARSPVPACRANRCHRDTTRFRPSRFA CCCCCEECCCEEEEECCCCHHCCCHHHHHHCCCCCCHHHHCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA