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The map label for this gene is rmuC [H]

Identifier: 78050015

GI number: 78050015

Start: 5140646

End: 5142088

Strand: Reverse

Name: rmuC [H]

Synonym: XCV4459

Alternate gene names: 78050015

Gene position: 5142088-5140646 (Counterclockwise)

Preceding gene: 78050016

Following gene: 78050014

Centisome position: 99.3

GC content: 65.9

Gene sequence:

>1443_bases
TTGCGCGAGCAACTCGAAGGCCTGGCGCGGCAGCAGGACGCCCGCCTGGAAACCTTCGCGCGCAACCTCACCGAGTTGTC
CACGCGCACCGACCAACGCCTGGACCTGCTGCGCGACGCGCTCGGCGAAGATGCCCGCAAGGCGCGCGAAGAAAGCGGCC
TTGCACAACAACGCACCGGCGAGCTGCTGACACTGCGGCTCACCGAATTGCGCACCCAGCTCGAAGGCTTCGGCCAGCAA
CAGGAAACCCGCATCCACGTGTTCGGCCAGCAACTGACCGAACTGATCGCGCGCACCGATACGCACATGGCCGCGCTGCG
CGACGCGCTGGCCGAAGACGCCCGCAAGGGCCGCGCCGAAGCCGGCCAATCGCAACAACGCTTCACCGAAGCGCTGGGCC
AGCGCTTGAACGAACTCACCCAGCGCAACGAACTGCGCATCGGCGAGATGCGCGCCACGCTCGAGCAACAGCTGGCCAAC
CTGCAACACGACAACGCCAGCAAGCTCGAATTGATGCGCGCCACCGTCGATGAAAAACTGCAGACCACGCTCAACACACG
CCTGGATGCCTCGTTCAAGCTGGTCTCCGAACGGCTGGAACAGGTGCAACGCGGCCTGGGCGAAATGCAGCAGCTGGCCA
CCGGCGTGGGCGACCTCAAGCGCGTGCTCACCAACGTCAAGGACCGCGGCGGCTGGGGCGAAGTGCAGCTGGACAACATC
CTCGAGCAGACGCTGACGATGGAGCAATACGCCCGCGGCGTGCGGGTCAAGCCCGACAGTGCCGAAGCGGTGGATTTCGC
AATCCGCCTGCCCGGCCGCGGCGACGAGCAGGTGGTCTGGCTGCCGGTGGACGCCAAGTTCCCGCGCGAGGACTACGAAC
GCCTGATCGACGCGCAGGAAAAGGGCGACCTCGACGCGATCAAGCAATCGACCGCGCAACTGGAACGCGCCATCCGCATC
CAGGCCAAGTCGATCAGCGACAAGTACGTCTGCCCGCCGCACACCACCGACTTCGCGGTGATGTTTTTGCCCACCGAAGG
GCTGTATGCCGAAGTGATCCGCCGTGCCGGCCTGGTCGATCTGCTGCAGCGCGAACACCGCGTGGTGCTGGCCGGCCCCA
CCACGTTTACCGCCTTGCTCAACAGCCTGCAGATGGGCTTTCGCACGTTGGCGATCGAGAAGCGTTCCAGCGAGGTCTGG
CAGGTGCTGGGCGCGGTGAAAAGCGAGTTCGGCAAGTTCGCCGGCATTCTGGAAAAGGCCGAGCGGCAGATCAGCACCGT
CGGCAAGAGCCTGGGCGAAGCCAGCCGCAAGACCCGCACCATCGAACGCCGCCTGCGCGGGGTGGAAACCCTGGCCGGCG
AGCAATCGCAGGCGCTGCTGAACGATGGCAGCGACGACACCGGCACCAGCAGCGAAGACGACAGCACCGACGAGCAGGCG
TGA

Upstream 100 bases:

>100_bases
CGTAGTCCTCGTGTTGCAGCTGCTGGCGCTGCTGCGACGTCCGTCCACCACCGCGCTGGAACATGCACTGCGCGCCGAGC
AACGCGATGGCCGCGGCGAA

Downstream 100 bases:

>100_bases
TTGGCTGCCGACGCCGATGCATGGCCTGCACAGGCGACAGCACACGTAGGAGCGCACCCGGGCGCGAGCCGCTTTACCGA
TAACGCTTCATCGCGCCCGG

Product: RmuC family DNA recombination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MREQLEGLARQQDARLETFARNLTELSTRTDQRLDLLRDALGEDARKAREESGLAQQRTGELLTLRLTELRTQLEGFGQQ
QETRIHVFGQQLTELIARTDTHMAALRDALAEDARKGRAEAGQSQQRFTEALGQRLNELTQRNELRIGEMRATLEQQLAN
LQHDNASKLELMRATVDEKLQTTLNTRLDASFKLVSERLEQVQRGLGEMQQLATGVGDLKRVLTNVKDRGGWGEVQLDNI
LEQTLTMEQYARGVRVKPDSAEAVDFAIRLPGRGDEQVVWLPVDAKFPREDYERLIDAQEKGDLDAIKQSTAQLERAIRI
QAKSISDKYVCPPHTTDFAVMFLPTEGLYAEVIRRAGLVDLLQREHRVVLAGPTTFTALLNSLQMGFRTLAIEKRSSEVW
QVLGAVKSEFGKFAGILEKAERQISTVGKSLGEASRKTRTIERRLRGVETLAGEQSQALLNDGSDDTGTSSEDDSTDEQA

Sequences:

>Translated_480_residues
MREQLEGLARQQDARLETFARNLTELSTRTDQRLDLLRDALGEDARKAREESGLAQQRTGELLTLRLTELRTQLEGFGQQ
QETRIHVFGQQLTELIARTDTHMAALRDALAEDARKGRAEAGQSQQRFTEALGQRLNELTQRNELRIGEMRATLEQQLAN
LQHDNASKLELMRATVDEKLQTTLNTRLDASFKLVSERLEQVQRGLGEMQQLATGVGDLKRVLTNVKDRGGWGEVQLDNI
LEQTLTMEQYARGVRVKPDSAEAVDFAIRLPGRGDEQVVWLPVDAKFPREDYERLIDAQEKGDLDAIKQSTAQLERAIRI
QAKSISDKYVCPPHTTDFAVMFLPTEGLYAEVIRRAGLVDLLQREHRVVLAGPTTFTALLNSLQMGFRTLAIEKRSSEVW
QVLGAVKSEFGKFAGILEKAERQISTVGKSLGEASRKTRTIERRLRGVETLAGEQSQALLNDGSDDTGTSSEDDSTDEQA
>Mature_480_residues
MREQLEGLARQQDARLETFARNLTELSTRTDQRLDLLRDALGEDARKAREESGLAQQRTGELLTLRLTELRTQLEGFGQQ
QETRIHVFGQQLTELIARTDTHMAALRDALAEDARKGRAEAGQSQQRFTEALGQRLNELTQRNELRIGEMRATLEQQLAN
LQHDNASKLELMRATVDEKLQTTLNTRLDASFKLVSERLEQVQRGLGEMQQLATGVGDLKRVLTNVKDRGGWGEVQLDNI
LEQTLTMEQYARGVRVKPDSAEAVDFAIRLPGRGDEQVVWLPVDAKFPREDYERLIDAQEKGDLDAIKQSTAQLERAIRI
QAKSISDKYVCPPHTTDFAVMFLPTEGLYAEVIRRAGLVDLLQREHRVVLAGPTTFTALLNSLQMGFRTLAIEKRSSEVW
QVLGAVKSEFGKFAGILEKAERQISTVGKSLGEASRKTRTIERRLRGVETLAGEQSQALLNDGSDDTGTSSEDDSTDEQA

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 53851; Mature: 53851

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREQLEGLARQQDARLETFARNLTELSTRTDQRLDLLRDALGEDARKAREESGLAQQRTG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHCC
ELLTLRLTELRTQLEGFGQQQETRIHVFGQQLTELIARTDTHMAALRDALAEDARKGRAE
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
AGQSQQRFTEALGQRLNELTQRNELRIGEMRATLEQQLANLQHDNASKLELMRATVDEKL
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QTTLNTRLDASFKLVSERLEQVQRGLGEMQQLATGVGDLKRVLTNVKDRGGWGEVQLDNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LEQTLTMEQYARGVRVKPDSAEAVDFAIRLPGRGDEQVVWLPVDAKFPREDYERLIDAQE
HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHCCCC
KGDLDAIKQSTAQLERAIRIQAKSISDKYVCPPHTTDFAVMFLPTEGLYAEVIRRAGLVD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCHHH
LLQREHRVVLAGPTTFTALLNSLQMGFRTLAIEKRSSEVWQVLGAVKSEFGKFAGILEKA
HHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERQISTVGKSLGEASRKTRTIERRLRGVETLAGEQSQALLNDGSDDTGTSSEDDSTDEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MREQLEGLARQQDARLETFARNLTELSTRTDQRLDLLRDALGEDARKAREESGLAQQRTG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHCC
ELLTLRLTELRTQLEGFGQQQETRIHVFGQQLTELIARTDTHMAALRDALAEDARKGRAE
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
AGQSQQRFTEALGQRLNELTQRNELRIGEMRATLEQQLANLQHDNASKLELMRATVDEKL
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QTTLNTRLDASFKLVSERLEQVQRGLGEMQQLATGVGDLKRVLTNVKDRGGWGEVQLDNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LEQTLTMEQYARGVRVKPDSAEAVDFAIRLPGRGDEQVVWLPVDAKFPREDYERLIDAQE
HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHCCCC
KGDLDAIKQSTAQLERAIRIQAKSISDKYVCPPHTTDFAVMFLPTEGLYAEVIRRAGLVD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCHHH
LLQREHRVVLAGPTTFTALLNSLQMGFRTLAIEKRSSEVWQVLGAVKSEFGKFAGILEKA
HHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERQISTVGKSLGEASRKTRTIERRLRGVETLAGEQSQALLNDGSDDTGTSSEDDSTDEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]