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The map label for this gene is 78049989

Identifier: 78049989

GI number: 78049989

Start: 5107960

End: 5108592

Strand: Reverse

Name: 78049989

Synonym: XCV4433

Alternate gene names: NA

Gene position: 5108592-5107960 (Counterclockwise)

Preceding gene: 78049991

Following gene: 78049988

Centisome position: 98.65

GC content: 67.3

Gene sequence:

>633_bases
TTGCTCCACTTAGTATATGGAGGTAGCCTCCACTTCCACAAGTCTCGCCGGAAGAGCCCGTTGACCGCCAAAACTCCCTT
GCGCGCCGATGCCCAGCGAAACCGCGAGCGCCTGCTCGCCGCGGCCGAGGAGGTATTCCTGGAGCGCGGCGCCGAGGCGT
CGATGGAAGACGTCGCCAAGCGCGCCGGTGTGGGCATCGGCACGCTGTATCGGCGCTTCCCCACACGCGAGTCGTTGTTT
GCCGCGGCCTATAGCGGGCGCTTCCTGTCGCTGGCGAACGCCAGTCACGCGCGCGCCAGTTCGCTCGACGCGCTGGCCGC
GCTGCGCGCGTATCTGGAGGATCTGGCACTGCACACCAGTGTCTATCGTGGGCTGGCTGCGTCGCTCGGCGCCGTGCTGC
AGAGCGGCACGCCAGGGTGCGAGGCCGTCAGCAAGGAAGGGCAGCAACGTTTGCGTAGCGCGCAGAACAGCGGCGTCGTC
CGCTGCGATGTCTGCTTCGACGATCTCGTCGTCGTCGCCATCGCCACCTCGCTGGCCACCGAACAGCATGGCGCGCCGAA
GAGGCGCATCGCGCATCTGATCGGGCTGTTCGTCGACGGCATTGCAGCGCCAAGGGCGGCGTCGGCTGCATGA

Upstream 100 bases:

>100_bases
GCCTGCGCGGTCACCAGCCCGATGCCGTCCGTACCGCCAGTGACCACGACCACCTTGCCTTCGAATCGCTTGCCCATGGT
GTTTCCTAGTAAGTGGAGGA

Downstream 100 bases:

>100_bases
GGCGGCTGACACGATGACGCCCGGATTGCCCGACCGTTCGTGTCGGGTGGTGAGGGCTCGGAACCCACGCACGCGCGAGC
GTTGACAAGGGAGAACGATC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator; TetR-Type Regulator; Transcription Regulator Protein; TetR Family Protein Transcriptional Regulator; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein Tetr Family; TetR Family Transcriptional Regulatory Protein; TetR Family Regulator; TetR Family Transcription Regulator Protein; Transcriptional Regulator Protein; Transcription Regulator

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MLHLVYGGSLHFHKSRRKSPLTAKTPLRADAQRNRERLLAAAEEVFLERGAEASMEDVAKRAGVGIGTLYRRFPTRESLF
AAAYSGRFLSLANASHARASSLDALAALRAYLEDLALHTSVYRGLAASLGAVLQSGTPGCEAVSKEGQQRLRSAQNSGVV
RCDVCFDDLVVVAIATSLATEQHGAPKRRIAHLIGLFVDGIAAPRAASAA

Sequences:

>Translated_210_residues
MLHLVYGGSLHFHKSRRKSPLTAKTPLRADAQRNRERLLAAAEEVFLERGAEASMEDVAKRAGVGIGTLYRRFPTRESLF
AAAYSGRFLSLANASHARASSLDALAALRAYLEDLALHTSVYRGLAASLGAVLQSGTPGCEAVSKEGQQRLRSAQNSGVV
RCDVCFDDLVVVAIATSLATEQHGAPKRRIAHLIGLFVDGIAAPRAASAA
>Mature_210_residues
MLHLVYGGSLHFHKSRRKSPLTAKTPLRADAQRNRERLLAAAEEVFLERGAEASMEDVAKRAGVGIGTLYRRFPTRESLF
AAAYSGRFLSLANASHARASSLDALAALRAYLEDLALHTSVYRGLAASLGAVLQSGTPGCEAVSKEGQQRLRSAQNSGVV
RCDVCFDDLVVVAIATSLATEQHGAPKRRIAHLIGLFVDGIAAPRAASAA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22366; Mature: 22366

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHLVYGGSLHFHKSRRKSPLTAKTPLRADAQRNRERLLAAAEEVFLERGAEASMEDVAK
CEEEEECCCEEECHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RAGVGIGTLYRRFPTRESLFAAAYSGRFLSLANASHARASSLDALAALRAYLEDLALHTS
HHCCCHHHHHHHCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VYRGLAASLGAVLQSGTPGCEAVSKEGQQRLRSAQNSGVVRCDVCFDDLVVVAIATSLAT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHH
EQHGAPKRRIAHLIGLFVDGIAAPRAASAA
HHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLHLVYGGSLHFHKSRRKSPLTAKTPLRADAQRNRERLLAAAEEVFLERGAEASMEDVAK
CEEEEECCCEEECHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RAGVGIGTLYRRFPTRESLFAAAYSGRFLSLANASHARASSLDALAALRAYLEDLALHTS
HHCCCHHHHHHHCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VYRGLAASLGAVLQSGTPGCEAVSKEGQQRLRSAQNSGVVRCDVCFDDLVVVAIATSLAT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHH
EQHGAPKRRIAHLIGLFVDGIAAPRAASAA
HHCCCHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA