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The map label for this gene is 78049949

Identifier: 78049949

GI number: 78049949

Start: 5064191

End: 5064784

Strand: Reverse

Name: 78049949

Synonym: XCV4393

Alternate gene names: NA

Gene position: 5064784-5064191 (Counterclockwise)

Preceding gene: 78049950

Following gene: 78049948

Centisome position: 97.8

GC content: 70.37

Gene sequence:

>594_bases
ATGGTTTCCGACGTCCTGGCAGTTCCGCCATCGGCTGCGCTCGCACTGCGCCACGCCACCCAGGATGCCCATCGCCTGGT
CGAAGCAGTGCCGCTGATGCAGGCGTTAGCGCAGGGGCGGGTCGATTCGGCCGCCTATGTGCAGATCCTGCGCCGCCACC
ATGCCTTGCTGAGCGGCTTCGAAGCGCAACTCGGCAACTGGCTGGCCACCCTGGTCGGCAACGGCTGGCATTACCGCCGT
CGGGTGCCGGCACTGCGCGATGACCTGCGCGCGCTCGGCCAGCAACCGGATCTGCCGGCCGCACTGCCCGCCACTGCCGA
CGATGCCGCGCGCTGGGGCATGTTGTACGTCATCGAAGGCTCGCAGCTCGGTGGACGGGTGATCGCACGCAGCGTGCGCA
AGCAGCAGCCCGCGCTGGCCGGCGCCCTGCGCTATTTCGAGATGGCCGACGACGACCCGGCCGGCTGGCGCCGCTTCCAG
GCAGCGCTGGACCGACGCCTGGCCACCCCATCCGCACGCGACGCCGCCATCGACGGCGCGCAGGCCATGTTCGCCCACTT
CCATACCTGCCTCGCAGCGGAGCCACAGCCGTGA

Upstream 100 bases:

>100_bases
AAGCCAACCTATTCAGCTTGCGCTCGCGTCTGCTTTTTCTGATTTGCGCAGGCACTGCTAGGCTGGTGTCCTTCGTGCCG
CGGCACCGCTTTGAGCCCCT

Downstream 100 bases:

>100_bases
ATCAGCCCACCGAACCTCTGGATATGGATGTCTGCGCGCGGGAACCGATCCATATTCCCGGCCTGATCCAGCCTTACGGC
GTGTTGCTGGTGATCGAACC

Product: putative heme oxygenase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MVSDVLAVPPSAALALRHATQDAHRLVEAVPLMQALAQGRVDSAAYVQILRRHHALLSGFEAQLGNWLATLVGNGWHYRR
RVPALRDDLRALGQQPDLPAALPATADDAARWGMLYVIEGSQLGGRVIARSVRKQQPALAGALRYFEMADDDPAGWRRFQ
AALDRRLATPSARDAAIDGAQAMFAHFHTCLAAEPQP

Sequences:

>Translated_197_residues
MVSDVLAVPPSAALALRHATQDAHRLVEAVPLMQALAQGRVDSAAYVQILRRHHALLSGFEAQLGNWLATLVGNGWHYRR
RVPALRDDLRALGQQPDLPAALPATADDAARWGMLYVIEGSQLGGRVIARSVRKQQPALAGALRYFEMADDDPAGWRRFQ
AALDRRLATPSARDAAIDGAQAMFAHFHTCLAAEPQP
>Mature_197_residues
MVSDVLAVPPSAALALRHATQDAHRLVEAVPLMQALAQGRVDSAAYVQILRRHHALLSGFEAQLGNWLATLVGNGWHYRR
RVPALRDDLRALGQQPDLPAALPATADDAARWGMLYVIEGSQLGGRVIARSVRKQQPALAGALRYFEMADDDPAGWRRFQ
AALDRRLATPSARDAAIDGAQAMFAHFHTCLAAEPQP

Specific function: Unknown

COG id: COG3230

COG function: function code P; Heme oxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21426; Mature: 21426

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSDVLAVPPSAALALRHATQDAHRLVEAVPLMQALAQGRVDSAAYVQILRRHHALLSGF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EAQLGNWLATLVGNGWHYRRRVPALRDDLRALGQQPDLPAALPATADDAARWGMLYVIEG
HHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCEEEEEEC
SQLGGRVIARSVRKQQPALAGALRYFEMADDDPAGWRRFQAALDRRLATPSARDAAIDGA
CCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QAMFAHFHTCLAAEPQP
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVSDVLAVPPSAALALRHATQDAHRLVEAVPLMQALAQGRVDSAAYVQILRRHHALLSGF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EAQLGNWLATLVGNGWHYRRRVPALRDDLRALGQQPDLPAALPATADDAARWGMLYVIEG
HHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCEEEEEEC
SQLGGRVIARSVRKQQPALAGALRYFEMADDDPAGWRRFQAALDRRLATPSARDAAIDGA
CCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QAMFAHFHTCLAAEPQP
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA