Click here to switch to the map view.

The map label for this gene is mdoD [H]

Identifier: 78049943

GI number: 78049943

Start: 5050199

End: 5051851

Strand: Reverse

Name: mdoD [H]

Synonym: XCV4387

Alternate gene names: 78049943

Gene position: 5051851-5050199 (Counterclockwise)

Preceding gene: 78049944

Following gene: 78049939

Centisome position: 97.55

GC content: 63.4

Gene sequence:

>1653_bases
ATGCCGGGCTGTGGCTATGATGTCGCCCATTCCCTGACCAGATCGATGCGCATGCAACGACGCCACTTCCTGAAGAATGC
TGCTGCCGCATTGGCCGCGCTCGGTTTGCCGACGTTGCCGCAGTGGGCGCTGGCGGCCAAGGCCGTTGGTCTGCGTCGAC
TCGGGCAACCGCAACCCTTCGACTACGCCTGGTTGAAAGGGCAGGCGCGCGCGCTGGCGAAGGCGCCTTATAAAAGCCAC
AAGCAGGTATTGCCGGGGCCGCTCGAGGCGCTGAACTGGGATCAGTATCAGTCCATCCGCTATCGCCAGGACCACGCGTT
GTGGGCCGATGGCAACGGCAAATTCCAGGCCAAGTTCTTCCACCTGGGACTGTATTTCCATACCCCGGTGCACATTTACG
ACATCGTCGATGGCAAGGCACAGCAACTGGCCTACGACCCGGCGGCATTCGATTACGGCCGCAGCGGGCTGGGCGGCAAG
CAATTGCCAAAGGATCTGGGCTTTGCCGGTTTCCGGCTCAACACACGCAAGGACACCGACCGCGACTTTTCGGCATTCCT
GGGTGCAAGCTATTTCCGTGCGGTCGGCAAGGAAGGCCAGTATGGGCAGTCGGCACGCGGGCTGGCCATCGATACCGGTA
CCGGCGGGCCGGAAGAGTTTCCGGATTTCATCGCCTATTACCTGGAGCAGCCGGCCGACGATTCGGACACGGTGGTGGTG
TACGGCTTGCTGGATTCGCCCAGCGTTGCCGGCGCGTACCGCTTCGCCATCACCAATGGCGATGTGCTGCTGATGGATAT
CGACAGCGCGCTGTACCCACGCAAGGCGATCGAGCGGCTGGGTATCGGCCCGTGCACCAGCATGTACCAGGTCGGCGAAA
ACGATAACCGGATGGACTGGGATTGGCGTCCGGAAATTCACGACACCGATGGCCTGGCGATGTGGACCGGCGGCGGCGAA
TGGATCTGGCGCCCGTTATGCAACCCGCCGCATCTGCGTTTCAACATGTTCGTCGACGAGAACCCGCGTGGGTTCGGGCT
GCTGCAGCGCGACCGCAACTTCGACCATTACCAGGACGATGGCGTGTTTTACGAAAAGCGCCCGTGCCTGTGGGTGGAAC
CCAAGAGTGGTTGGGGCAAGGGCTCGGTGCAGCTGGTCGAGATTCCGACCGTGGACGAGACCTTCGACAACATCGTGGCG
TTCTGGAACCCGCAAGCCAAGCCGCAGCCGGGGCAGGAACTGCTGATGGGCTACCGGCTGTACTGGGGCGCGCAGCCGCC
GGCCAGCTCGCCGTTGGCGCATTGCGTGGCGACCCGAACCGGCCTCGGCGGCATCGTCGGGCAAAAACGCAGCCATTTCT
CCTGGCGCTTTGCGGTGGATTTTGCCGGCGGCGAACTGGCCGCGCTGGCGAAGGACGCAAAGGCCAAGGTGGAGGCGGTG
TTGCAGGTGTCGCGCGGCACTACTGAAATCGTGTCGGCGCGCCCGCTGCACGAGCTCAAGGGCTATCGGGCGATGTTCGA
CCTGGTGCCGCCGGACGAGGGCACCCAGCAGATCGATATCCGCCTGTATCTGCGCGCCAATGGCAAGCCGCTCACCGAAA
CCTGGCTGTACCAGTGGACGCCGCCGCCGCCGAGCGAGCGCAAGATTTACTGA

Upstream 100 bases:

>100_bases
AGGCGCAGCGGCGGTTCCTTTGCAGCCAGGCCAACGCGCTGGCGCTGGCCAATGCGTGCGATGCGCCGCCTGCGCCTCGC
TGAGATGCGAATTCACGTCG

Downstream 100 bases:

>100_bases
GAAGCGCCGGGCGGGGCGGCCGGCGACGCTTGTTGCGGGCATCGCGGGGCCAGCGCGGTCGCATGCGGCAATGCGGCGCC
AGGGGACGCGTGGCCAGCTG

Product: glucan biosynthesis protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 549

Protein sequence:

>550_residues
MPGCGYDVAHSLTRSMRMQRRHFLKNAAAALAALGLPTLPQWALAAKAVGLRRLGQPQPFDYAWLKGQARALAKAPYKSH
KQVLPGPLEALNWDQYQSIRYRQDHALWADGNGKFQAKFFHLGLYFHTPVHIYDIVDGKAQQLAYDPAAFDYGRSGLGGK
QLPKDLGFAGFRLNTRKDTDRDFSAFLGASYFRAVGKEGQYGQSARGLAIDTGTGGPEEFPDFIAYYLEQPADDSDTVVV
YGLLDSPSVAGAYRFAITNGDVLLMDIDSALYPRKAIERLGIGPCTSMYQVGENDNRMDWDWRPEIHDTDGLAMWTGGGE
WIWRPLCNPPHLRFNMFVDENPRGFGLLQRDRNFDHYQDDGVFYEKRPCLWVEPKSGWGKGSVQLVEIPTVDETFDNIVA
FWNPQAKPQPGQELLMGYRLYWGAQPPASSPLAHCVATRTGLGGIVGQKRSHFSWRFAVDFAGGELAALAKDAKAKVEAV
LQVSRGTTEIVSARPLHELKGYRAMFDLVPPDEGTQQIDIRLYLRANGKPLTETWLYQWTPPPPSERKIY

Sequences:

>Translated_550_residues
MPGCGYDVAHSLTRSMRMQRRHFLKNAAAALAALGLPTLPQWALAAKAVGLRRLGQPQPFDYAWLKGQARALAKAPYKSH
KQVLPGPLEALNWDQYQSIRYRQDHALWADGNGKFQAKFFHLGLYFHTPVHIYDIVDGKAQQLAYDPAAFDYGRSGLGGK
QLPKDLGFAGFRLNTRKDTDRDFSAFLGASYFRAVGKEGQYGQSARGLAIDTGTGGPEEFPDFIAYYLEQPADDSDTVVV
YGLLDSPSVAGAYRFAITNGDVLLMDIDSALYPRKAIERLGIGPCTSMYQVGENDNRMDWDWRPEIHDTDGLAMWTGGGE
WIWRPLCNPPHLRFNMFVDENPRGFGLLQRDRNFDHYQDDGVFYEKRPCLWVEPKSGWGKGSVQLVEIPTVDETFDNIVA
FWNPQAKPQPGQELLMGYRLYWGAQPPASSPLAHCVATRTGLGGIVGQKRSHFSWRFAVDFAGGELAALAKDAKAKVEAV
LQVSRGTTEIVSARPLHELKGYRAMFDLVPPDEGTQQIDIRLYLRANGKPLTETWLYQWTPPPPSERKIY
>Mature_549_residues
PGCGYDVAHSLTRSMRMQRRHFLKNAAAALAALGLPTLPQWALAAKAVGLRRLGQPQPFDYAWLKGQARALAKAPYKSHK
QVLPGPLEALNWDQYQSIRYRQDHALWADGNGKFQAKFFHLGLYFHTPVHIYDIVDGKAQQLAYDPAAFDYGRSGLGGKQ
LPKDLGFAGFRLNTRKDTDRDFSAFLGASYFRAVGKEGQYGQSARGLAIDTGTGGPEEFPDFIAYYLEQPADDSDTVVVY
GLLDSPSVAGAYRFAITNGDVLLMDIDSALYPRKAIERLGIGPCTSMYQVGENDNRMDWDWRPEIHDTDGLAMWTGGGEW
IWRPLCNPPHLRFNMFVDENPRGFGLLQRDRNFDHYQDDGVFYEKRPCLWVEPKSGWGKGSVQLVEIPTVDETFDNIVAF
WNPQAKPQPGQELLMGYRLYWGAQPPASSPLAHCVATRTGLGGIVGQKRSHFSWRFAVDFAGGELAALAKDAKAKVEAVL
QVSRGTTEIVSARPLHELKGYRAMFDLVPPDEGTQQIDIRLYLRANGKPLTETWLYQWTPPPPSERKIY

Specific function: Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs) [H]

COG id: COG3131

COG function: function code P; Periplasmic glucans biosynthesis protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opgD/opgG family [H]

Homologues:

Organism=Escherichia coli, GI145693128, Length=548, Percent_Identity=43.978102189781, Blast_Score=440, Evalue=1e-124,
Organism=Escherichia coli, GI1787286, Length=485, Percent_Identity=38.7628865979381, Blast_Score=328, Evalue=4e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014438
- InterPro:   IPR007444
- InterPro:   IPR011013
- InterPro:   IPR014756
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04349 MdoG [H]

EC number: NA

Molecular weight: Translated: 61612; Mature: 61481

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGCGYDVAHSLTRSMRMQRRHFLKNAAAALAALGLPTLPQWALAAKAVGLRRLGQPQPF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
DYAWLKGQARALAKAPYKSHKQVLPGPLEALNWDQYQSIRYRQDHALWADGNGKFQAKFF
CCHHHCCHHHHHHHCCCHHCCCCCCCCHHHCCCCHHHHHEEECCCEEEECCCCEEEEEEE
HLGLYFHTPVHIYDIVDGKAQQLAYDPAAFDYGRSGLGGKQLPKDLGFAGFRLNTRKDTD
EEEEEEECCEEEEEECCCCHHHHCCCCCHHHCCCCCCCCCCCCHHHCCCCEEECCCCCCC
RDFSAFLGASYFRAVGKEGQYGQSARGLAIDTGTGGPEEFPDFIAYYLEQPADDSDTVVV
CHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEE
YGLLDSPSVAGAYRFAITNGDVLLMDIDSALYPRKAIERLGIGPCTSMYQVGENDNRMDW
EEECCCCCCCCEEEEEEECCCEEEEECCCHHCCHHHHHHCCCCCCCHHHHCCCCCCCCCC
DWRPEIHDTDGLAMWTGGGEWIWRPLCNPPHLRFNMFVDENPRGFGLLQRDRNFDHYQDD
CCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCC
GVFYEKRPCLWVEPKSGWGKGSVQLVEIPTVDETFDNIVAFWNPQAKPQPGQELLMGYRL
CEEEECCCEEEECCCCCCCCCCEEEEEECCCHHHHHCEEEEECCCCCCCCCHHHHHHHHE
YWGAQPPASSPLAHCVATRTGLGGIVGQKRSHFSWRFAVDFAGGELAALAKDAKAKVEAV
EECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHH
LQVSRGTTEIVSARPLHELKGYRAMFDLVPPDEGTQQIDIRLYLRANGKPLTETWLYQWT
HHHCCCCHHHHCCCCHHHHCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEC
PPPPSERKIY
CCCCCCCCCC
>Mature Secondary Structure 
PGCGYDVAHSLTRSMRMQRRHFLKNAAAALAALGLPTLPQWALAAKAVGLRRLGQPQPF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
DYAWLKGQARALAKAPYKSHKQVLPGPLEALNWDQYQSIRYRQDHALWADGNGKFQAKFF
CCHHHCCHHHHHHHCCCHHCCCCCCCCHHHCCCCHHHHHEEECCCEEEECCCCEEEEEEE
HLGLYFHTPVHIYDIVDGKAQQLAYDPAAFDYGRSGLGGKQLPKDLGFAGFRLNTRKDTD
EEEEEEECCEEEEEECCCCHHHHCCCCCHHHCCCCCCCCCCCCHHHCCCCEEECCCCCCC
RDFSAFLGASYFRAVGKEGQYGQSARGLAIDTGTGGPEEFPDFIAYYLEQPADDSDTVVV
CHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEE
YGLLDSPSVAGAYRFAITNGDVLLMDIDSALYPRKAIERLGIGPCTSMYQVGENDNRMDW
EEECCCCCCCCEEEEEEECCCEEEEECCCHHCCHHHHHHCCCCCCCHHHHCCCCCCCCCC
DWRPEIHDTDGLAMWTGGGEWIWRPLCNPPHLRFNMFVDENPRGFGLLQRDRNFDHYQDD
CCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCC
GVFYEKRPCLWVEPKSGWGKGSVQLVEIPTVDETFDNIVAFWNPQAKPQPGQELLMGYRL
CEEEECCCEEEECCCCCCCCCCEEEEEECCCHHHHHCEEEEECCCCCCCCCHHHHHHHHE
YWGAQPPASSPLAHCVATRTGLGGIVGQKRSHFSWRFAVDFAGGELAALAKDAKAKVEAV
EECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHH
LQVSRGTTEIVSARPLHELKGYRAMFDLVPPDEGTQQIDIRLYLRANGKPLTETWLYQWT
HHHCCCCHHHHCCCCHHHHCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEC
PPPPSERKIY
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA