| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049819
Identifier: 78049819
GI number: 78049819
Start: 4895660
End: 4897531
Strand: Reverse
Name: 78049819
Synonym: XCV4263
Alternate gene names: NA
Gene position: 4897531-4895660 (Counterclockwise)
Preceding gene: 78049820
Following gene: 78049818
Centisome position: 94.57
GC content: 66.56
Gene sequence:
>1872_bases ATGGCAGCACGACCGGGTGCTGCCATGATCGGGCGTTCGCTCCAGATCAGGCGTCCGCACGTGACCTCTCCGCTCGCCGC CGCACTCTCGCTCGCCCTGCTGGGCGCAGGCTTCGCCGCCCCCTCGGCGCAGGCCGCCACGCCACCGGCCACGCTCACCG CCGAGGCACCGGCCGATGCACGCTTTCGCGCGATCTACGAGAAAGAGTGGGCCTGGCGCCAGGCCGAGACCGGCCAGGCC GACGAAGACAGCGACACCACCGGCGACAACACGCATCTGCCCGATGTCAGCGCGGCCGCGCAGCAGGCGCGTCTGGCGGT ATGGGACGGCGTACTCAAGCAGCTCGACGGCATCGACCCGAAGCAGCTCTCGCCGGCCAACCAGATCAACTTCGCCATCT ACCGCCCGCAGGTGGAAAACCTGGCCGCCGAAGTGCGCCTGCGCCTGTACGAAATGCCGTTCAATTCGGATAGCTCGTTC TGGTCGAATCTGGGCTTCATGGCGCAGCGGCCGATGAAGACCGCGGCCGAGTACCGCGCCTACATCGCGCGCCTGAACGA TGTACCGCGCTATTTCGACCAGCAGACGGTCAACATGCGCGCCGGCCTGGCACGCGGATTCAGCGTGCCGCGTGCCGTGC TGGACGGGCGCGATGTCTCCATCGCCACCGTGGCCGATGTCAAAGATCCCACCGAATCCACTTTCTACGCGCCGTTCAAG CAGCTGCCTGCGCAGATCCCGGCGGCCGAGCAGGCGCAACTGCGCGAACAGGCCAAGGCCGCGTTGCGCACCGCCGTCCT TCCGGCGTACAGCAAGCTGCTGACGTTCTTCCGCAACGACTACATGCCCAAGGCGCGCACCACGCTGGCGGCCGAAGCAC TGCCCGACGGCAAGGCGTTCTACCGGCAGCAAATCCGCGAATACACCACGCTGGAACTGACGCCCGAGCAGATCCACCAG ATCGGCCTGGACGAAGTGGCGCGCATCCAGACCCAGATGAACGCCATCATCCAGCAGGTGGGTTTCAAGGGCAGCTTCGC GCAGTTCCTGGCCTTCCTGCGCACCGACCCGCAGTTCTACGCCAAGACCCCGCAGGAGTTGCTCGATCGCGCCGCATGGA TTTCCAAGCGCGTGGACGGGCAGGTGGGCAAGTTCATCGGCACGCTGCCGCGCGGGCGCTTCACCATCAAGCCGGTGCCC GACGATATCGCCCCGTTCTGGACCGCCGGCCGCGGCGGCGCCACCACTTACTGGGTCAACACCTACAACCTGCCATCGCG GCCGCTGTACAACTTGCCGGCGCTGACGTTGCACGAGTCCTCGCCGGGTCATTCGCTGCAGGGGTCGCTGGCGCTGGAGC AGGGCGAGCAACCGGCGTTCCGGCGCGAGAACTACATTTCCGCCTACGGCGAGGGCTGGGCGCTGTACACCGAAAAGCTC GGCCAGGAGATGGGCATCTACGAAACCCCGTACGAAGAATTCGGCCGGCTCACCTACGAAATGTGGCGCGCCTGCCGGTT GGTGATCGACACCGGTGTGCACCATGACGGCTGGAGCCGCGCGCAGGCACTGGCCTATCTGCGCGACCGCACTGCGCTCA GCGAGCACGAAGTCACCACCGAAGTGGACCGCTACATCTCCTGGCCAGGCCAGGCGCTGAGCTACAAGCTGGGCGAGATC ACCATCGTCAAGCTGCGCGCCGAGGCAGAAAAGGCGCTGGGTGACCGCTTCGACATCAAGGCCTTCCACGATGTGGTGCT GCGCCAGGGCTCGGTCACCTTGCCGGTGCTGGAGCAGCAGGTGCGCGCCTTTATCGCTGAGAGCAAGGCACGCCCGATAG ACGCCAAATCGGCCGGTCGCGCGGCGCCGTGA
Upstream 100 bases:
>100_bases GGCGGATGGGGGCAGTCCCCCTGACACGCCCGTCAATAACAGGGCAGCACCGACACTCCAGCCATGCCCCTGCACCAGCC CGTGTTGGGACTTCCGGCCC
Downstream 100 bases:
>100_bases TGCTGGGTCGCATTGCCGACCGCCGGCCAACCTTCTAGTGCGGTGAGGGCATCGCGCCCTCAAGGTCTTCGCGTTTACTC CAGGGCCCTTGCCCGCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 623; Mature: 622
Protein sequence:
>623_residues MAARPGAAMIGRSLQIRRPHVTSPLAAALSLALLGAGFAAPSAQAATPPATLTAEAPADARFRAIYEKEWAWRQAETGQA DEDSDTTGDNTHLPDVSAAAQQARLAVWDGVLKQLDGIDPKQLSPANQINFAIYRPQVENLAAEVRLRLYEMPFNSDSSF WSNLGFMAQRPMKTAAEYRAYIARLNDVPRYFDQQTVNMRAGLARGFSVPRAVLDGRDVSIATVADVKDPTESTFYAPFK QLPAQIPAAEQAQLREQAKAALRTAVLPAYSKLLTFFRNDYMPKARTTLAAEALPDGKAFYRQQIREYTTLELTPEQIHQ IGLDEVARIQTQMNAIIQQVGFKGSFAQFLAFLRTDPQFYAKTPQELLDRAAWISKRVDGQVGKFIGTLPRGRFTIKPVP DDIAPFWTAGRGGATTYWVNTYNLPSRPLYNLPALTLHESSPGHSLQGSLALEQGEQPAFRRENYISAYGEGWALYTEKL GQEMGIYETPYEEFGRLTYEMWRACRLVIDTGVHHDGWSRAQALAYLRDRTALSEHEVTTEVDRYISWPGQALSYKLGEI TIVKLRAEAEKALGDRFDIKAFHDVVLRQGSVTLPVLEQQVRAFIAESKARPIDAKSAGRAAP
Sequences:
>Translated_623_residues MAARPGAAMIGRSLQIRRPHVTSPLAAALSLALLGAGFAAPSAQAATPPATLTAEAPADARFRAIYEKEWAWRQAETGQA DEDSDTTGDNTHLPDVSAAAQQARLAVWDGVLKQLDGIDPKQLSPANQINFAIYRPQVENLAAEVRLRLYEMPFNSDSSF WSNLGFMAQRPMKTAAEYRAYIARLNDVPRYFDQQTVNMRAGLARGFSVPRAVLDGRDVSIATVADVKDPTESTFYAPFK QLPAQIPAAEQAQLREQAKAALRTAVLPAYSKLLTFFRNDYMPKARTTLAAEALPDGKAFYRQQIREYTTLELTPEQIHQ IGLDEVARIQTQMNAIIQQVGFKGSFAQFLAFLRTDPQFYAKTPQELLDRAAWISKRVDGQVGKFIGTLPRGRFTIKPVP DDIAPFWTAGRGGATTYWVNTYNLPSRPLYNLPALTLHESSPGHSLQGSLALEQGEQPAFRRENYISAYGEGWALYTEKL GQEMGIYETPYEEFGRLTYEMWRACRLVIDTGVHHDGWSRAQALAYLRDRTALSEHEVTTEVDRYISWPGQALSYKLGEI TIVKLRAEAEKALGDRFDIKAFHDVVLRQGSVTLPVLEQQVRAFIAESKARPIDAKSAGRAAP >Mature_622_residues AARPGAAMIGRSLQIRRPHVTSPLAAALSLALLGAGFAAPSAQAATPPATLTAEAPADARFRAIYEKEWAWRQAETGQAD EDSDTTGDNTHLPDVSAAAQQARLAVWDGVLKQLDGIDPKQLSPANQINFAIYRPQVENLAAEVRLRLYEMPFNSDSSFW SNLGFMAQRPMKTAAEYRAYIARLNDVPRYFDQQTVNMRAGLARGFSVPRAVLDGRDVSIATVADVKDPTESTFYAPFKQ LPAQIPAAEQAQLREQAKAALRTAVLPAYSKLLTFFRNDYMPKARTTLAAEALPDGKAFYRQQIREYTTLELTPEQIHQI GLDEVARIQTQMNAIIQQVGFKGSFAQFLAFLRTDPQFYAKTPQELLDRAAWISKRVDGQVGKFIGTLPRGRFTIKPVPD DIAPFWTAGRGGATTYWVNTYNLPSRPLYNLPALTLHESSPGHSLQGSLALEQGEQPAFRRENYISAYGEGWALYTEKLG QEMGIYETPYEEFGRLTYEMWRACRLVIDTGVHHDGWSRAQALAYLRDRTALSEHEVTTEVDRYISWPGQALSYKLGEIT IVKLRAEAEKALGDRFDIKAFHDVVLRQGSVTLPVLEQQVRAFIAESKARPIDAKSAGRAAP
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69260; Mature: 69129
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARPGAAMIGRSLQIRRPHVTSPLAAALSLALLGAGFAAPSAQAATPPATLTAEAPADA CCCCCCHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCH RFRAIYEKEWAWRQAETGQADEDSDTTGDNTHLPDVSAAAQQARLAVWDGVLKQLDGIDP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC KQLSPANQINFAIYRPQVENLAAEVRLRLYEMPFNSDSSFWSNLGFMAQRPMKTAAEYRA HHCCCCCCCEEEEECCHHHHHHHHHHHHHEECCCCCCCHHHHHCCHHHHCHHHHHHHHHH YIARLNDVPRYFDQQTVNMRAGLARGFSVPRAVLDGRDVSIATVADVKDPTESTFYAPFK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCCCCEECCHH QLPAQIPAAEQAQLREQAKAALRTAVLPAYSKLLTFFRNDYMPKARTTLAAEALPDGKAF HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH YRQQIREYTTLELTPEQIHQIGLDEVARIQTQMNAIIQQVGFKGSFAQFLAFLRTDPQFY HHHHHHHHHEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH AKTPQELLDRAAWISKRVDGQVGKFIGTLPRGRFTIKPVPDDIAPFWTAGRGGATTYWVN HCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEE TYNLPSRPLYNLPALTLHESSPGHSLQGSLALEQGEQPAFRRENYISAYGEGWALYTEKL ECCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCHHHHCHHHHCCCCHHHHHHHH GQEMGIYETPYEEFGRLTYEMWRACRLVIDTGVHHDGWSRAQALAYLRDRTALSEHEVTT HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EVDRYISWPGQALSYKLGEITIVKLRAEAEKALGDRFDIKAFHDVVLRQGSVTLPVLEQQ HHHHHHCCCCHHHEEECCCEEEEEEEHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHH VRAFIAESKARPIDAKSAGRAAP HHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure AARPGAAMIGRSLQIRRPHVTSPLAAALSLALLGAGFAAPSAQAATPPATLTAEAPADA CCCCCHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCH RFRAIYEKEWAWRQAETGQADEDSDTTGDNTHLPDVSAAAQQARLAVWDGVLKQLDGIDP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC KQLSPANQINFAIYRPQVENLAAEVRLRLYEMPFNSDSSFWSNLGFMAQRPMKTAAEYRA HHCCCCCCCEEEEECCHHHHHHHHHHHHHEECCCCCCCHHHHHCCHHHHCHHHHHHHHHH YIARLNDVPRYFDQQTVNMRAGLARGFSVPRAVLDGRDVSIATVADVKDPTESTFYAPFK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCCCCEECCHH QLPAQIPAAEQAQLREQAKAALRTAVLPAYSKLLTFFRNDYMPKARTTLAAEALPDGKAF HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH YRQQIREYTTLELTPEQIHQIGLDEVARIQTQMNAIIQQVGFKGSFAQFLAFLRTDPQFY HHHHHHHHHEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH AKTPQELLDRAAWISKRVDGQVGKFIGTLPRGRFTIKPVPDDIAPFWTAGRGGATTYWVN HCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEE TYNLPSRPLYNLPALTLHESSPGHSLQGSLALEQGEQPAFRRENYISAYGEGWALYTEKL ECCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCHHHHCHHHHCCCCHHHHHHHH GQEMGIYETPYEEFGRLTYEMWRACRLVIDTGVHHDGWSRAQALAYLRDRTALSEHEVTT HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EVDRYISWPGQALSYKLGEITIVKLRAEAEKALGDRFDIKAFHDVVLRQGSVTLPVLEQQ HHHHHHCCCCHHHEEECCCEEEEEEEHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHH VRAFIAESKARPIDAKSAGRAAP HHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA