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The map label for this gene is 78049794

Identifier: 78049794

GI number: 78049794

Start: 4867158

End: 4869068

Strand: Reverse

Name: 78049794

Synonym: XCV4238

Alternate gene names: NA

Gene position: 4869068-4867158 (Counterclockwise)

Preceding gene: 78049795

Following gene: 78049793

Centisome position: 94.03

GC content: 66.46

Gene sequence:

>1911_bases
ATGTCGTCGAAGGGCACGGTTGACGCCATGGACCCGCGCCTGCTGCCGTACTACACCCGCGAATTGCAGCACGTGCGCGA
CATGGGCGCGGAGTTCGCGCGCGAGTATCCCAAGATCGCCGGACGGCTCGGTCTGGACGCGTTCGAATGTGCCGACCCGT
ATGTCGAGCGGTTGCTGGAAGGCTTCGCGTTCCTGGCCGCGCGCGTGCAACTCAAGCTGGACGCGCAGTACCCCGTGTTC
ACCCAGCACCTGCTGGAGATGGTCTACCCGCATTATCTGGCGCCGCTGCCGTCGATGGCGGTGGTGCAGTTGCAGCCGGA
TCTGAAAGACAGCGGGCTGGCAGCAGGCGTGGTGGTGCCGCGGCAAAGTGCGCTGCGCAGCCTGGTCGGCCCGGGCGAGC
GCACCGCCTGCGAATTTCGCACCGCGCATGCAGTGAGCTTGTGGCCGTTGCAGCTGGCCGAGGTCAAGTATCTTGAATCG
CCGGCCGCGTTGGCGGCTGCCGGCATCGCCTTGCCGGCCGGGCGCGTGGTGCGTGCCGGCGTGCGTCTGCGCTTTGAGCT
GGTGGGTGGTGCGCAGACGCAAGCGCTGGCGCTGGATCGGCTGCCGCTATTCCTGGCCGGCGCCGACGGCTTGCCCAAGC
GGTTGTACGAACAGCTGCATGCCGATACCACCGCCGTGGTGGTGCGTGGCAGTAATGCCAGCGGTGGCATGCTGGAGATG
ACGCTGGGCGCCGATACCGTGCAGATGCGCGGCTTTGCCGGCGACGATGCATTGATTCCGTACGACGGCCGTTCGTTCAG
TGGTTACCGCCTGCTGCAGGAATACTTCGCCTGTCCGGAGCGCTTTCTGTTCGCAGAACTCACCGGGCTGCGCGCGTCAT
TGCGGCGGTTGCACGGCAGCAGCTTCGAGGTGGTGGTGTTGCTGCAACGCAGCCTGCCCAGCCTGGCTGCGGCAGTGGGC
GCCGAGCATTTCAAATTGTTCTGCACCCCGGCAATCAATCTGTTCCCGCGGCGTGCCGATCGCATCCATCTGCACGCCGG
CCTGCACGAATACCACGTGCTGGCCGACCGCACCCGGCCGATGGATTTCGAGATCCATCATTTGGGCGAAGTGGAAGGCT
TCGGCGATCGTCAGGAGCCGGAGCAACGCTTCGCGCCGTTCTATGGTGGCGACGCACGCACTTGGCATGCCCGGCATGGC
GCGTTCTACAGCATGCGCCGCGAGCCGCGCATGCTATCGGCCCGCCAGCGCCGCGATGGCGCGCGGTCGAGTTATGTGGG
CAGCGAAGTGTTCGTCAGCCTGGTCGATGCCGACGATCAGCCGCACAGAACGCGCCTGCGCCAGCTTGGGCTGCAACTGT
GGTGCAGCAACCGCGATCTGCCGCTGCATATGCCGGTAGGCAAGGGCACCACCGATTTCACCATGGACAGCGGCGTGCCG
GTGCAGAGCGTGCGCTGCGTGGCCGGGCCGACCAAGCCGCGCCCGGCGTTGTCGGATGGGCAGACTGCGTGGCGCCTGCT
CAGCCAATTGCAGCTCAATTATCTCTCGCTCTTCGAAGACGGCCCCGACGGCGCCGCTGCGCTACGCGAGATCCTCACCT
TGTACTGCGACCCGTTCGACGCATCCGCGCAGCGGCAGATCGAAGGCGTCAAGCAGGTGAGCGGCACACCGATCGTGCGG
CGTATCCCGGTGCCTGGCCCGATCACCTTCGGCCGCGGCCTGGAGATCACGCTGACCTGCGAGGACGCCGCGTTCGAAGG
CACCGGCGCCTTCCTGCTGGCTTCGGTGCTGCGGCACTTCTTCGCGCGCTATGTCTCGGTGAATTCCTTCACCGAAACCG
TGCTGCGCACCACCGAACGCAACGAGGTGGCCCGATGGCTAGCCCAGCCCGGCACGCGCCCACGCCTGTGA

Upstream 100 bases:

>100_bases
CGCTCGCTGCTGTTCACCATCGAATCGGAGATGTGGGCGCAACCGCTGCCGTTGAATCTGTATCTGAAGACCGCGCTGGA
CCTGGAAACCGGGCGGCTCG

Downstream 100 bases:

>100_bases
GCGCCGCGGCTGCGGCGCTGGCCCAGGCGCTGCAGACCCGGCCACAGGATTTCAGCCCGTTCGCGGCCTTGCGCGCGATC
GAGCGCTGCCATCCGCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 636; Mature: 635

Protein sequence:

>636_residues
MSSKGTVDAMDPRLLPYYTRELQHVRDMGAEFAREYPKIAGRLGLDAFECADPYVERLLEGFAFLAARVQLKLDAQYPVF
TQHLLEMVYPHYLAPLPSMAVVQLQPDLKDSGLAAGVVVPRQSALRSLVGPGERTACEFRTAHAVSLWPLQLAEVKYLES
PAALAAAGIALPAGRVVRAGVRLRFELVGGAQTQALALDRLPLFLAGADGLPKRLYEQLHADTTAVVVRGSNASGGMLEM
TLGADTVQMRGFAGDDALIPYDGRSFSGYRLLQEYFACPERFLFAELTGLRASLRRLHGSSFEVVVLLQRSLPSLAAAVG
AEHFKLFCTPAINLFPRRADRIHLHAGLHEYHVLADRTRPMDFEIHHLGEVEGFGDRQEPEQRFAPFYGGDARTWHARHG
AFYSMRREPRMLSARQRRDGARSSYVGSEVFVSLVDADDQPHRTRLRQLGLQLWCSNRDLPLHMPVGKGTTDFTMDSGVP
VQSVRCVAGPTKPRPALSDGQTAWRLLSQLQLNYLSLFEDGPDGAAALREILTLYCDPFDASAQRQIEGVKQVSGTPIVR
RIPVPGPITFGRGLEITLTCEDAAFEGTGAFLLASVLRHFFARYVSVNSFTETVLRTTERNEVARWLAQPGTRPRL

Sequences:

>Translated_636_residues
MSSKGTVDAMDPRLLPYYTRELQHVRDMGAEFAREYPKIAGRLGLDAFECADPYVERLLEGFAFLAARVQLKLDAQYPVF
TQHLLEMVYPHYLAPLPSMAVVQLQPDLKDSGLAAGVVVPRQSALRSLVGPGERTACEFRTAHAVSLWPLQLAEVKYLES
PAALAAAGIALPAGRVVRAGVRLRFELVGGAQTQALALDRLPLFLAGADGLPKRLYEQLHADTTAVVVRGSNASGGMLEM
TLGADTVQMRGFAGDDALIPYDGRSFSGYRLLQEYFACPERFLFAELTGLRASLRRLHGSSFEVVVLLQRSLPSLAAAVG
AEHFKLFCTPAINLFPRRADRIHLHAGLHEYHVLADRTRPMDFEIHHLGEVEGFGDRQEPEQRFAPFYGGDARTWHARHG
AFYSMRREPRMLSARQRRDGARSSYVGSEVFVSLVDADDQPHRTRLRQLGLQLWCSNRDLPLHMPVGKGTTDFTMDSGVP
VQSVRCVAGPTKPRPALSDGQTAWRLLSQLQLNYLSLFEDGPDGAAALREILTLYCDPFDASAQRQIEGVKQVSGTPIVR
RIPVPGPITFGRGLEITLTCEDAAFEGTGAFLLASVLRHFFARYVSVNSFTETVLRTTERNEVARWLAQPGTRPRL
>Mature_635_residues
SSKGTVDAMDPRLLPYYTRELQHVRDMGAEFAREYPKIAGRLGLDAFECADPYVERLLEGFAFLAARVQLKLDAQYPVFT
QHLLEMVYPHYLAPLPSMAVVQLQPDLKDSGLAAGVVVPRQSALRSLVGPGERTACEFRTAHAVSLWPLQLAEVKYLESP
AALAAAGIALPAGRVVRAGVRLRFELVGGAQTQALALDRLPLFLAGADGLPKRLYEQLHADTTAVVVRGSNASGGMLEMT
LGADTVQMRGFAGDDALIPYDGRSFSGYRLLQEYFACPERFLFAELTGLRASLRRLHGSSFEVVVLLQRSLPSLAAAVGA
EHFKLFCTPAINLFPRRADRIHLHAGLHEYHVLADRTRPMDFEIHHLGEVEGFGDRQEPEQRFAPFYGGDARTWHARHGA
FYSMRREPRMLSARQRRDGARSSYVGSEVFVSLVDADDQPHRTRLRQLGLQLWCSNRDLPLHMPVGKGTTDFTMDSGVPV
QSVRCVAGPTKPRPALSDGQTAWRLLSQLQLNYLSLFEDGPDGAAALREILTLYCDPFDASAQRQIEGVKQVSGTPIVRR
IPVPGPITFGRGLEITLTCEDAAFEGTGAFLLASVLRHFFARYVSVNSFTETVLRTTERNEVARWLAQPGTRPRL

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70363; Mature: 70232

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKGTVDAMDPRLLPYYTRELQHVRDMGAEFAREYPKIAGRLGLDAFECADPYVERLLE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHH
GFAFLAARVQLKLDAQYPVFTQHLLEMVYPHYLAPLPSMAVVQLQPDLKDSGLAAGVVVP
HHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECC
RQSALRSLVGPGERTACEFRTAHAVSLWPLQLAEVKYLESPAALAAAGIALPAGRVVRAG
CHHHHHHHCCCCCCCCHHHHCCCEEEECCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCC
VRLRFELVGGAQTQALALDRLPLFLAGADGLPKRLYEQLHADTTAVVVRGSNASGGMLEM
CEEEEEEECCCCHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEE
TLGADTVQMRGFAGDDALIPYDGRSFSGYRLLQEYFACPERFLFAELTGLRASLRRLHGS
EECCCEEEECCCCCCCCEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
SFEVVVLLQRSLPSLAAAVGAEHFKLFCTPAINLFPRRADRIHLHAGLHEYHVLADRTRP
CCEEEEEEHHCCHHHHHHHCCCCEEEEEECHHHHCCCCCCEEEEECCCHHHHHHHCCCCC
MDFEIHHLGEVEGFGDRQEPEQRFAPFYGGDARTWHARHGAFYSMRREPRMLSARQRRDG
CCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCCCHHHHCCCCHHHHHHHHCCC
ARSSYVGSEVFVSLVDADDQPHRTRLRQLGLQLWCSNRDLPLHMPVGKGTTDFTMDSGVP
CHHHCCCHHHEEEEECCCCCHHHHHHHHHCHHEEECCCCCEEEECCCCCCCCEEECCCCC
VQSVRCVAGPTKPRPALSDGQTAWRLLSQLQLNYLSLFEDGPDGAAALREILTLYCDPFD
HHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
ASAQRQIEGVKQVSGTPIVRRIPVPGPITFGRGLEITLTCEDAAFEGTGAFLLASVLRHF
CCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
FARYVSVNSFTETVLRTTERNEVARWLAQPGTRPRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SSKGTVDAMDPRLLPYYTRELQHVRDMGAEFAREYPKIAGRLGLDAFECADPYVERLLE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHH
GFAFLAARVQLKLDAQYPVFTQHLLEMVYPHYLAPLPSMAVVQLQPDLKDSGLAAGVVVP
HHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECC
RQSALRSLVGPGERTACEFRTAHAVSLWPLQLAEVKYLESPAALAAAGIALPAGRVVRAG
CHHHHHHHCCCCCCCCHHHHCCCEEEECCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCC
VRLRFELVGGAQTQALALDRLPLFLAGADGLPKRLYEQLHADTTAVVVRGSNASGGMLEM
CEEEEEEECCCCHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEE
TLGADTVQMRGFAGDDALIPYDGRSFSGYRLLQEYFACPERFLFAELTGLRASLRRLHGS
EECCCEEEECCCCCCCCEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
SFEVVVLLQRSLPSLAAAVGAEHFKLFCTPAINLFPRRADRIHLHAGLHEYHVLADRTRP
CCEEEEEEHHCCHHHHHHHCCCCEEEEEECHHHHCCCCCCEEEEECCCHHHHHHHCCCCC
MDFEIHHLGEVEGFGDRQEPEQRFAPFYGGDARTWHARHGAFYSMRREPRMLSARQRRDG
CCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCCCHHHHCCCCHHHHHHHHCCC
ARSSYVGSEVFVSLVDADDQPHRTRLRQLGLQLWCSNRDLPLHMPVGKGTTDFTMDSGVP
CHHHCCCHHHEEEEECCCCCHHHHHHHHHCHHEEECCCCCEEEECCCCCCCCEEECCCCC
VQSVRCVAGPTKPRPALSDGQTAWRLLSQLQLNYLSLFEDGPDGAAALREILTLYCDPFD
HHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
ASAQRQIEGVKQVSGTPIVRRIPVPGPITFGRGLEITLTCEDAAFEGTGAFLLASVLRHF
CCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
FARYVSVNSFTETVLRTTERNEVARWLAQPGTRPRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA