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The map label for this gene is 78049795

Identifier: 78049795

GI number: 78049795

Start: 4869046

End: 4869549

Strand: Reverse

Name: 78049795

Synonym: XCV4239

Alternate gene names: NA

Gene position: 4869549-4869046 (Counterclockwise)

Preceding gene: 78049796

Following gene: 78049794

Centisome position: 94.03

GC content: 65.08

Gene sequence:

>504_bases
ATGGCCGAACTCACCACTACCGAACGCTTGCAGCCTTCGCTACTGGACCGGCTCACCGATGCCGCGCCCAGCCAGCGCGA
AGAGAGCCGCGAGCAACGCGTGATCTCGGCCACGCGCCTGCGCGAATGCGTGATCCGCGATCTGTCGTGGTTGCTCAATG
CCGTAAATCTGGAAACCAGCCGCCCGCTGGAGGCGCACCCGCAGGTGCGCAGCTCGGTGCTGAATTACGGCATCCCGGAC
CTGGCCGGTGTTGCAGTGGCCGGCATCGATGCGGCAGCGCTGCAACAGCGCATCCGCGAGGCGATTCTGGCCTTCGAACC
GCGGCTGATACCCGAGACGCTGCGCGTCAGTGTGCATGCCGATGCCGCACGCATGGACCGGCGCTCGCTGCTGTTCACCA
TCGAATCGGAGATGTGGGCGCAACCGCTGCCGTTGAATCTGTATCTGAAGACCGCGCTGGACCTGGAAACCGGGCGGCTC
GATGTCGTCGAAGGGCACGGTTGA

Upstream 100 bases:

>100_bases
AGGGCGAAATCGGCCTGGGCCAGCGCATGTGGAGCACAGAGTCGCACGAGATTGCGCTGCTCGATGTGCGTGACGTGCAG
TTCGACGCGGACTGATTTCA

Downstream 100 bases:

>100_bases
CGCCATGGACCCGCGCCTGCTGCCGTACTACACCCGCGAATTGCAGCACGTGCGCGACATGGGCGCGGAGTTCGCGCGCG
AGTATCCCAAGATCGCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: GPW/Gp25 Family Protein; Cytoplasmic Protein; Replication/Virulence Associated Protein; T6SS Lysozyme-Related D; Cytoplasmic Protein SciD; Type VI Secretion System Lysozyme-Related Family Protein; Type VI Secretion System Lysozyme-Like Protein; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpF; Type VI Secretion System Lysozyme-Related Family

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MAELTTTERLQPSLLDRLTDAAPSQREESREQRVISATRLRECVIRDLSWLLNAVNLETSRPLEAHPQVRSSVLNYGIPD
LAGVAVAGIDAAALQQRIREAILAFEPRLIPETLRVSVHADAARMDRRSLLFTIESEMWAQPLPLNLYLKTALDLETGRL
DVVEGHG

Sequences:

>Translated_167_residues
MAELTTTERLQPSLLDRLTDAAPSQREESREQRVISATRLRECVIRDLSWLLNAVNLETSRPLEAHPQVRSSVLNYGIPD
LAGVAVAGIDAAALQQRIREAILAFEPRLIPETLRVSVHADAARMDRRSLLFTIESEMWAQPLPLNLYLKTALDLETGRL
DVVEGHG
>Mature_166_residues
AELTTTERLQPSLLDRLTDAAPSQREESREQRVISATRLRECVIRDLSWLLNAVNLETSRPLEAHPQVRSSVLNYGIPDL
AGVAVAGIDAAALQQRIREAILAFEPRLIPETLRVSVHADAARMDRRSLLFTIESEMWAQPLPLNLYLKTALDLETGRLD
VVEGHG

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18659; Mature: 18527

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELTTTERLQPSLLDRLTDAAPSQREESREQRVISATRLRECVIRDLSWLLNAVNLETS
CCCCCCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RPLEAHPQVRSSVLNYGIPDLAGVAVAGIDAAALQQRIREAILAFEPRLIPETLRVSVHA
CCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEECC
DAARMDRRSLLFTIESEMWAQPLPLNLYLKTALDLETGRLDVVEGHG
CHHHHCCHHHEEEECHHHCCCCCCCEEEEHHHHCCCCCCEEEEECCC
>Mature Secondary Structure 
AELTTTERLQPSLLDRLTDAAPSQREESREQRVISATRLRECVIRDLSWLLNAVNLETS
CCCCCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RPLEAHPQVRSSVLNYGIPDLAGVAVAGIDAAALQQRIREAILAFEPRLIPETLRVSVHA
CCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEECC
DAARMDRRSLLFTIESEMWAQPLPLNLYLKTALDLETGRLDVVEGHG
CHHHHCCHHHEEEECHHHCCCCCCCEEEEHHHHCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA