| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049669
Identifier: 78049669
GI number: 78049669
Start: 4707560
End: 4708744
Strand: Reverse
Name: 78049669
Synonym: XCV4113
Alternate gene names: NA
Gene position: 4708744-4707560 (Counterclockwise)
Preceding gene: 78049670
Following gene: 162138528
Centisome position: 90.93
GC content: 64.56
Gene sequence:
>1185_bases ATGCAACGACGTCAATTTCTGCTTGCCTCTGCCGCCGCTGCAAGCATGCCGTGGGCCGGCCGTCTGTTCGCTGCGCCACG CGATAGCGCGCGCATGCTGGTGGTGTTTTTGCGTGGCGGCTACGACAGCAATAATCTGCTGGTGCCGCATGGCAGCGATT TTTATTACCAGTCGCGGCCGAGCCTGGCGATTGCGCGGCCAGATGCCGCCAATTCAAACAGTGCCCTGGCGCTGGATGCG CAGTGGGGTCTCAACCCGGTGGTAGGCCAGACGCTGCTGCCACTGTGGGAACGCAAGCAAGTGGCCTTCGTGCCGTTTGC CGGCACCGACGATCTGTCGCGCAGCCACTTCGAAACCCAGGACGATATCGAATCCGGCCAGGCCGGCAAGCACCGCGATT ACCGCTCCGGGTTCATGGCGCGCCTGTCTGGCGTACTCAGTGGCGTGCCGGCCATCGCGTTCACCGATTCGTTGCCGCTG ACGTTCCAGGGCGGTGGCGATTTACCCAACGTGTCGTTGCGGAGTATCGGCAAAGGCGGGCTGGATGCGCGGCAGGCGCA GATCCTGTCGCAGATGTACGACAGCACGCCGCTGGCCGCCGCTGCGCGCGATGGTCTTGCATTGCGTCAGCAGGTCACCG CGCAGTTGCGCGAAGAGATGGAGCAAGCCGGTCGTGGCGCCGCCAGTGCACGCACGTTTGCCGATGAAACCCGGCGCATG GCGACCTTGATGCGCGAGCGCTATCGCCTGGGGTTCGTCGATGTCGGTGGCTGGGACACGCATGCCAACCAGGGCAGTGT GGAAGGTGGCCTGGCCAACAACCTGCGCAATCTCGGCGAAGGGCTGGCTGCCTATGCCGATGCGTTGGGCCCGGCCTGGA ACGATACCGTGGTGGTGGTCATCTCCGAATTCGGCCGCACCTTCCGCGAGAATGGCAGCAAGGGCACCGATCATGGCCAT GGCACAACGTACTGGGTGCTGGGCGGTGGCGTGCGCGGCGGCCGCATCGCTGGCGAGCAGGTGGCGGTCGAACAGGCGCA GCTGCTGCAAAACCGCGATTACCCGGTGCTCAACAACTACCGCAGCCTGTTCGGCGGAATGCTCGGCCGTCTGTGGGGGC TGTCGCCAGCGCAGTTGGAACGGGTATTCCCAGGTGCCAAGCCACGCGATCTTGGATTGGTGTGA
Upstream 100 bases:
>100_bases ATCTGCCGATTCAAGGCCCACGCGTCACGTTCGCAGATGCAACAACAACCGATCCAGCGATCCAACGAATGCCAGGCGCT CAATGCCGCGGGAGTACACC
Downstream 100 bases:
>100_bases GTGTGCATGGCGAGCGATCGCACCGTGCGTGGTATCGACAGCCGGCTTGTGTCGATCCCGCGGCGTCTGCTTCGGGCGAC GGCTGCAGGTTGCTCCTGCC
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MQRRQFLLASAAAASMPWAGRLFAAPRDSARMLVVFLRGGYDSNNLLVPHGSDFYYQSRPSLAIARPDAANSNSALALDA QWGLNPVVGQTLLPLWERKQVAFVPFAGTDDLSRSHFETQDDIESGQAGKHRDYRSGFMARLSGVLSGVPAIAFTDSLPL TFQGGGDLPNVSLRSIGKGGLDARQAQILSQMYDSTPLAAAARDGLALRQQVTAQLREEMEQAGRGAASARTFADETRRM ATLMRERYRLGFVDVGGWDTHANQGSVEGGLANNLRNLGEGLAAYADALGPAWNDTVVVVISEFGRTFRENGSKGTDHGH GTTYWVLGGGVRGGRIAGEQVAVEQAQLLQNRDYPVLNNYRSLFGGMLGRLWGLSPAQLERVFPGAKPRDLGLV
Sequences:
>Translated_394_residues MQRRQFLLASAAAASMPWAGRLFAAPRDSARMLVVFLRGGYDSNNLLVPHGSDFYYQSRPSLAIARPDAANSNSALALDA QWGLNPVVGQTLLPLWERKQVAFVPFAGTDDLSRSHFETQDDIESGQAGKHRDYRSGFMARLSGVLSGVPAIAFTDSLPL TFQGGGDLPNVSLRSIGKGGLDARQAQILSQMYDSTPLAAAARDGLALRQQVTAQLREEMEQAGRGAASARTFADETRRM ATLMRERYRLGFVDVGGWDTHANQGSVEGGLANNLRNLGEGLAAYADALGPAWNDTVVVVISEFGRTFRENGSKGTDHGH GTTYWVLGGGVRGGRIAGEQVAVEQAQLLQNRDYPVLNNYRSLFGGMLGRLWGLSPAQLERVFPGAKPRDLGLV >Mature_394_residues MQRRQFLLASAAAASMPWAGRLFAAPRDSARMLVVFLRGGYDSNNLLVPHGSDFYYQSRPSLAIARPDAANSNSALALDA QWGLNPVVGQTLLPLWERKQVAFVPFAGTDDLSRSHFETQDDIESGQAGKHRDYRSGFMARLSGVLSGVPAIAFTDSLPL TFQGGGDLPNVSLRSIGKGGLDARQAQILSQMYDSTPLAAAARDGLALRQQVTAQLREEMEQAGRGAASARTFADETRRM ATLMRERYRLGFVDVGGWDTHANQGSVEGGLANNLRNLGEGLAAYADALGPAWNDTVVVVISEFGRTFRENGSKGTDHGH GTTYWVLGGGVRGGRIAGEQVAVEQAQLLQNRDYPVLNNYRSLFGGMLGRLWGLSPAQLERVFPGAKPRDLGLV
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42522; Mature: 42522
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRQFLLASAAAASMPWAGRLFAAPRDSARMLVVFLRGGYDSNNLLVPHGSDFYYQSRP CCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCCCCCEEECCCCCCEECCCC SLAIARPDAANSNSALALDAQWGLNPVVGQTLLPLWERKQVAFVPFAGTDDLSRSHFETQ CEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCH DDIESGQAGKHRDYRSGFMARLSGVLSGVPAIAFTDSLPLTFQGGGDLPNVSLRSIGKGG HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCCCCCCCHHHHCCCCC LDARQAQILSQMYDSTPLAAAARDGLALRQQVTAQLREEMEQAGRGAASARTFADETRRM CHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ATLMRERYRLGFVDVGGWDTHANQGSVEGGLANNLRNLGEGLAAYADALGPAWNDTVVVV HHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE ISEFGRTFRENGSKGTDHGHGTTYWVLGGGVRGGRIAGEQVAVEQAQLLQNRDYPVLNNY EHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH RSLFGGMLGRLWGLSPAQLERVFPGAKPRDLGLV HHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MQRRQFLLASAAAASMPWAGRLFAAPRDSARMLVVFLRGGYDSNNLLVPHGSDFYYQSRP CCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCCCCCEEECCCCCCEECCCC SLAIARPDAANSNSALALDAQWGLNPVVGQTLLPLWERKQVAFVPFAGTDDLSRSHFETQ CEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCH DDIESGQAGKHRDYRSGFMARLSGVLSGVPAIAFTDSLPLTFQGGGDLPNVSLRSIGKGG HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCCCCCCCHHHHCCCCC LDARQAQILSQMYDSTPLAAAARDGLALRQQVTAQLREEMEQAGRGAASARTFADETRRM CHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ATLMRERYRLGFVDVGGWDTHANQGSVEGGLANNLRNLGEGLAAYADALGPAWNDTVVVV HHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE ISEFGRTFRENGSKGTDHGHGTTYWVLGGGVRGGRIAGEQVAVEQAQLLQNRDYPVLNNY EHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH RSLFGGMLGRLWGLSPAQLERVFPGAKPRDLGLV HHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA