Definition Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome.
Accession NC_007508
Length 5,178,466

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The map label for this gene is 78049670

Identifier: 78049670

GI number: 78049670

Start: 4708864

End: 4710453

Strand: Reverse

Name: 78049670

Synonym: XCV4114

Alternate gene names: NA

Gene position: 4710453-4708864 (Counterclockwise)

Preceding gene: 78049671

Following gene: 78049669

Centisome position: 90.96

GC content: 65.16

Gene sequence:

>1590_bases
ATGTTCGAGCAAGTTGGCCAGGCTGTGGGCGTGGATGCGCGCGTCGCGCACGTGCGGCGCACGCGAGGATGGCGTGTGCT
GCCGCTGTTGATCGGCAGCCTGTACGCGCTCACTTGCACGGCTGCCGAAACGCCGCTGACCCCATCGCAGATGCGCTGGC
TGCAGCGGGCCACCTATGGGGTTGATGCCAGCAGCGCGACGCAGCTGACACGGCTGGGCCCCAAGCGCTTTGGTGCGTTG
TTGTTGCAGCCCAGCGACGACGCTGCGTTGCCCGCGCCGGTAGGCGCGCAGCTGCAGCGCTTCGACGCATTGCATACCCC
GCTGGTGGCGTTGCTGACTCAGTACGAAGCCGACAAGGTCCGCCTGCAATCCATGCCCGATGGCGATGAGAAGGTTGCCT
TGCGCAAGGAGTGGCAGGCGCGCGGTGGCCAGATGCTGGTGCAGGCGCGGCAGGCGCAACTGTTGCGCGCGGTGTATGCG
CCGGATCAACTGCGCGAGCAACTGGTGTGGTTCTGGCTCAATCATTTCAGCGTGTACGCCGACAAGGCCCGGGTGAAGTG
GATGGCGGCCGACTACATGGAAAACGCGATCCGCCCCAATGCCACCGGCAAGTTCGCCGACCTGGTGATGGCCACGCTGG
AAAGCCCGGCGATGCTGGAATACCTGGACAACGCCAAGAACGCCAAGGGGAAGGTCAACGAAAACTACGCACGCGAGTTG
ATGGAACTGCATACGCTGGGCGTGCACGGCGGCTACGGCCAGCAGGATGTGCAGCAACTGGCGCTGATCCTCACCGGCGC
GGGCCTGGTGCCGATCAAGGCCAATGGCGCGCCGCCGTTGCCGCCTGCAGCGCCAGGGCAGGCGCAGGTCGTGCGCAAGG
GTCTGTTCGAATTCAATCCGGCGCGTCACCAACCCGGCGACAAGATGCTGCTTGGCCAGCGTATTGCCGGCGGTGGACTG
GATGAGATCGAACACGCCGTGCAGGTGTTGGTGCGCCAGCCGGCCTGTGCGCGTTTCATTTCGCAGCGTCTGGCCGAGTA
CTTCGTCAGCGACGCCCCGCCTGCGGCGTTGGTGACGCGCATGGCCGATACCTTCCAGCACAGCGATGGCGATATCGCCA
AGGTCATGCAGACCATGCTGGCGTCGCCGGAGTTTGCGCAGGCGCAACCGCGCAAGTTCAAGGACCCGAACCGGTTCGTG
GTGTCGGCGATGCGGGTGGCGTACGAGGGTCAACCAGTGATCAATGCCGCGCCAATGGCCAGTTGGGTGCAGCAGCTGGG
TGAACCGTTGTTTGGTCGCATCACGCCCGATGGTTGGTCGCTGCAGTCGCAGGCCTGGACCAGTTCCGGGCAGCTGGCAC
GCAGGTTCGATGTGGCGCGTTCGATCGGCGGCGCACCGAAGCAGTTGTTTCGTCTGGAGGGCGACAACCAGACGCCGATT
CCTGCGCCGGTGCAGATCGATACGCGCCCGTCGTACCGCTGGTTGGCGCCATCGCTGTCGGCCGCCACACGGCAGGCGCT
GGAGCAGGCGCGCTCGCCTGCCGAATGGAATGGGTTCTTGCTGTCGTCGCCAGACTTCACTTATCGCTAG

Upstream 100 bases:

>100_bases
ACCCGTGGCCAATGTGCGCTGGCCTTCCGACAACCGTTTAACGCCTCACGCGTTGGCTTACCCATACTGGGCGGGCAAGC
CGTTGCGATGGAGGGGCTGC

Downstream 100 bases:

>100_bases
GACCATGGCGCCGAGTCGGATCTGCCGATTCAAGGCCCACGCGTCACGTTCGCAGATGCAACAACAACCGATCCAGCGAT
CCAACGAATGCCAGGCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MFEQVGQAVGVDARVAHVRRTRGWRVLPLLIGSLYALTCTAAETPLTPSQMRWLQRATYGVDASSATQLTRLGPKRFGAL
LLQPSDDAALPAPVGAQLQRFDALHTPLVALLTQYEADKVRLQSMPDGDEKVALRKEWQARGGQMLVQARQAQLLRAVYA
PDQLREQLVWFWLNHFSVYADKARVKWMAADYMENAIRPNATGKFADLVMATLESPAMLEYLDNAKNAKGKVNENYAREL
MELHTLGVHGGYGQQDVQQLALILTGAGLVPIKANGAPPLPPAAPGQAQVVRKGLFEFNPARHQPGDKMLLGQRIAGGGL
DEIEHAVQVLVRQPACARFISQRLAEYFVSDAPPAALVTRMADTFQHSDGDIAKVMQTMLASPEFAQAQPRKFKDPNRFV
VSAMRVAYEGQPVINAAPMASWVQQLGEPLFGRITPDGWSLQSQAWTSSGQLARRFDVARSIGGAPKQLFRLEGDNQTPI
PAPVQIDTRPSYRWLAPSLSAATRQALEQARSPAEWNGFLLSSPDFTYR

Sequences:

>Translated_529_residues
MFEQVGQAVGVDARVAHVRRTRGWRVLPLLIGSLYALTCTAAETPLTPSQMRWLQRATYGVDASSATQLTRLGPKRFGAL
LLQPSDDAALPAPVGAQLQRFDALHTPLVALLTQYEADKVRLQSMPDGDEKVALRKEWQARGGQMLVQARQAQLLRAVYA
PDQLREQLVWFWLNHFSVYADKARVKWMAADYMENAIRPNATGKFADLVMATLESPAMLEYLDNAKNAKGKVNENYAREL
MELHTLGVHGGYGQQDVQQLALILTGAGLVPIKANGAPPLPPAAPGQAQVVRKGLFEFNPARHQPGDKMLLGQRIAGGGL
DEIEHAVQVLVRQPACARFISQRLAEYFVSDAPPAALVTRMADTFQHSDGDIAKVMQTMLASPEFAQAQPRKFKDPNRFV
VSAMRVAYEGQPVINAAPMASWVQQLGEPLFGRITPDGWSLQSQAWTSSGQLARRFDVARSIGGAPKQLFRLEGDNQTPI
PAPVQIDTRPSYRWLAPSLSAATRQALEQARSPAEWNGFLLSSPDFTYR
>Mature_529_residues
MFEQVGQAVGVDARVAHVRRTRGWRVLPLLIGSLYALTCTAAETPLTPSQMRWLQRATYGVDASSATQLTRLGPKRFGAL
LLQPSDDAALPAPVGAQLQRFDALHTPLVALLTQYEADKVRLQSMPDGDEKVALRKEWQARGGQMLVQARQAQLLRAVYA
PDQLREQLVWFWLNHFSVYADKARVKWMAADYMENAIRPNATGKFADLVMATLESPAMLEYLDNAKNAKGKVNENYAREL
MELHTLGVHGGYGQQDVQQLALILTGAGLVPIKANGAPPLPPAAPGQAQVVRKGLFEFNPARHQPGDKMLLGQRIAGGGL
DEIEHAVQVLVRQPACARFISQRLAEYFVSDAPPAALVTRMADTFQHSDGDIAKVMQTMLASPEFAQAQPRKFKDPNRFV
VSAMRVAYEGQPVINAAPMASWVQQLGEPLFGRITPDGWSLQSQAWTSSGQLARRFDVARSIGGAPKQLFRLEGDNQTPI
PAPVQIDTRPSYRWLAPSLSAATRQALEQARSPAEWNGFLLSSPDFTYR

Specific function: Unknown

COG id: COG5267

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58263; Mature: 58263

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEQVGQAVGVDARVAHVRRTRGWRVLPLLIGSLYALTCTAAETPLTPSQMRWLQRATYG
CCHHHHHHHCCCHHHHHHHHCCCCEEHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCC
VDASSATQLTRLGPKRFGALLLQPSDDAALPAPVGAQLQRFDALHTPLVALLTQYEADKV
CCCHHHHHHHHCCHHHHCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHH
RLQSMPDGDEKVALRKEWQARGGQMLVQARQAQLLRAVYAPDQLREQLVWFWLNHFSVYA
HCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
DKARVKWMAADYMENAIRPNATGKFADLVMATLESPAMLEYLDNAKNAKGKVNENYAREL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHH
MELHTLGVHGGYGQQDVQQLALILTGAGLVPIKANGAPPLPPAAPGQAQVVRKGLFEFNP
HHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCC
ARHQPGDKMLLGQRIAGGGLDEIEHAVQVLVRQPACARFISQRLAEYFVSDAPPAALVTR
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
MADTFQHSDGDIAKVMQTMLASPEFAQAQPRKFKDPNRFVVSAMRVAYEGQPVINAAPMA
HHHHHHCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHH
SWVQQLGEPLFGRITPDGWSLQSQAWTSSGQLARRFDVARSIGGAPKQLFRLEGDNQTPI
HHHHHHCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCHHHHEECCCCCCCC
PAPVQIDTRPSYRWLAPSLSAATRQALEQARSPAEWNGFLLSSPDFTYR
CCCEEECCCCCCEECCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MFEQVGQAVGVDARVAHVRRTRGWRVLPLLIGSLYALTCTAAETPLTPSQMRWLQRATYG
CCHHHHHHHCCCHHHHHHHHCCCCEEHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCC
VDASSATQLTRLGPKRFGALLLQPSDDAALPAPVGAQLQRFDALHTPLVALLTQYEADKV
CCCHHHHHHHHCCHHHHCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHH
RLQSMPDGDEKVALRKEWQARGGQMLVQARQAQLLRAVYAPDQLREQLVWFWLNHFSVYA
HCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
DKARVKWMAADYMENAIRPNATGKFADLVMATLESPAMLEYLDNAKNAKGKVNENYAREL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHH
MELHTLGVHGGYGQQDVQQLALILTGAGLVPIKANGAPPLPPAAPGQAQVVRKGLFEFNP
HHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCC
ARHQPGDKMLLGQRIAGGGLDEIEHAVQVLVRQPACARFISQRLAEYFVSDAPPAALVTR
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
MADTFQHSDGDIAKVMQTMLASPEFAQAQPRKFKDPNRFVVSAMRVAYEGQPVINAAPMA
HHHHHHCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHH
SWVQQLGEPLFGRITPDGWSLQSQAWTSSGQLARRFDVARSIGGAPKQLFRLEGDNQTPI
HHHHHHCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCHHHHEECCCCCCCC
PAPVQIDTRPSYRWLAPSLSAATRQALEQARSPAEWNGFLLSSPDFTYR
CCCEEECCCCCCEECCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA