| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049670
Identifier: 78049670
GI number: 78049670
Start: 4708864
End: 4710453
Strand: Reverse
Name: 78049670
Synonym: XCV4114
Alternate gene names: NA
Gene position: 4710453-4708864 (Counterclockwise)
Preceding gene: 78049671
Following gene: 78049669
Centisome position: 90.96
GC content: 65.16
Gene sequence:
>1590_bases ATGTTCGAGCAAGTTGGCCAGGCTGTGGGCGTGGATGCGCGCGTCGCGCACGTGCGGCGCACGCGAGGATGGCGTGTGCT GCCGCTGTTGATCGGCAGCCTGTACGCGCTCACTTGCACGGCTGCCGAAACGCCGCTGACCCCATCGCAGATGCGCTGGC TGCAGCGGGCCACCTATGGGGTTGATGCCAGCAGCGCGACGCAGCTGACACGGCTGGGCCCCAAGCGCTTTGGTGCGTTG TTGTTGCAGCCCAGCGACGACGCTGCGTTGCCCGCGCCGGTAGGCGCGCAGCTGCAGCGCTTCGACGCATTGCATACCCC GCTGGTGGCGTTGCTGACTCAGTACGAAGCCGACAAGGTCCGCCTGCAATCCATGCCCGATGGCGATGAGAAGGTTGCCT TGCGCAAGGAGTGGCAGGCGCGCGGTGGCCAGATGCTGGTGCAGGCGCGGCAGGCGCAACTGTTGCGCGCGGTGTATGCG CCGGATCAACTGCGCGAGCAACTGGTGTGGTTCTGGCTCAATCATTTCAGCGTGTACGCCGACAAGGCCCGGGTGAAGTG GATGGCGGCCGACTACATGGAAAACGCGATCCGCCCCAATGCCACCGGCAAGTTCGCCGACCTGGTGATGGCCACGCTGG AAAGCCCGGCGATGCTGGAATACCTGGACAACGCCAAGAACGCCAAGGGGAAGGTCAACGAAAACTACGCACGCGAGTTG ATGGAACTGCATACGCTGGGCGTGCACGGCGGCTACGGCCAGCAGGATGTGCAGCAACTGGCGCTGATCCTCACCGGCGC GGGCCTGGTGCCGATCAAGGCCAATGGCGCGCCGCCGTTGCCGCCTGCAGCGCCAGGGCAGGCGCAGGTCGTGCGCAAGG GTCTGTTCGAATTCAATCCGGCGCGTCACCAACCCGGCGACAAGATGCTGCTTGGCCAGCGTATTGCCGGCGGTGGACTG GATGAGATCGAACACGCCGTGCAGGTGTTGGTGCGCCAGCCGGCCTGTGCGCGTTTCATTTCGCAGCGTCTGGCCGAGTA CTTCGTCAGCGACGCCCCGCCTGCGGCGTTGGTGACGCGCATGGCCGATACCTTCCAGCACAGCGATGGCGATATCGCCA AGGTCATGCAGACCATGCTGGCGTCGCCGGAGTTTGCGCAGGCGCAACCGCGCAAGTTCAAGGACCCGAACCGGTTCGTG GTGTCGGCGATGCGGGTGGCGTACGAGGGTCAACCAGTGATCAATGCCGCGCCAATGGCCAGTTGGGTGCAGCAGCTGGG TGAACCGTTGTTTGGTCGCATCACGCCCGATGGTTGGTCGCTGCAGTCGCAGGCCTGGACCAGTTCCGGGCAGCTGGCAC GCAGGTTCGATGTGGCGCGTTCGATCGGCGGCGCACCGAAGCAGTTGTTTCGTCTGGAGGGCGACAACCAGACGCCGATT CCTGCGCCGGTGCAGATCGATACGCGCCCGTCGTACCGCTGGTTGGCGCCATCGCTGTCGGCCGCCACACGGCAGGCGCT GGAGCAGGCGCGCTCGCCTGCCGAATGGAATGGGTTCTTGCTGTCGTCGCCAGACTTCACTTATCGCTAG
Upstream 100 bases:
>100_bases ACCCGTGGCCAATGTGCGCTGGCCTTCCGACAACCGTTTAACGCCTCACGCGTTGGCTTACCCATACTGGGCGGGCAAGC CGTTGCGATGGAGGGGCTGC
Downstream 100 bases:
>100_bases GACCATGGCGCCGAGTCGGATCTGCCGATTCAAGGCCCACGCGTCACGTTCGCAGATGCAACAACAACCGATCCAGCGAT CCAACGAATGCCAGGCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MFEQVGQAVGVDARVAHVRRTRGWRVLPLLIGSLYALTCTAAETPLTPSQMRWLQRATYGVDASSATQLTRLGPKRFGAL LLQPSDDAALPAPVGAQLQRFDALHTPLVALLTQYEADKVRLQSMPDGDEKVALRKEWQARGGQMLVQARQAQLLRAVYA PDQLREQLVWFWLNHFSVYADKARVKWMAADYMENAIRPNATGKFADLVMATLESPAMLEYLDNAKNAKGKVNENYAREL MELHTLGVHGGYGQQDVQQLALILTGAGLVPIKANGAPPLPPAAPGQAQVVRKGLFEFNPARHQPGDKMLLGQRIAGGGL DEIEHAVQVLVRQPACARFISQRLAEYFVSDAPPAALVTRMADTFQHSDGDIAKVMQTMLASPEFAQAQPRKFKDPNRFV VSAMRVAYEGQPVINAAPMASWVQQLGEPLFGRITPDGWSLQSQAWTSSGQLARRFDVARSIGGAPKQLFRLEGDNQTPI PAPVQIDTRPSYRWLAPSLSAATRQALEQARSPAEWNGFLLSSPDFTYR
Sequences:
>Translated_529_residues MFEQVGQAVGVDARVAHVRRTRGWRVLPLLIGSLYALTCTAAETPLTPSQMRWLQRATYGVDASSATQLTRLGPKRFGAL LLQPSDDAALPAPVGAQLQRFDALHTPLVALLTQYEADKVRLQSMPDGDEKVALRKEWQARGGQMLVQARQAQLLRAVYA PDQLREQLVWFWLNHFSVYADKARVKWMAADYMENAIRPNATGKFADLVMATLESPAMLEYLDNAKNAKGKVNENYAREL MELHTLGVHGGYGQQDVQQLALILTGAGLVPIKANGAPPLPPAAPGQAQVVRKGLFEFNPARHQPGDKMLLGQRIAGGGL DEIEHAVQVLVRQPACARFISQRLAEYFVSDAPPAALVTRMADTFQHSDGDIAKVMQTMLASPEFAQAQPRKFKDPNRFV VSAMRVAYEGQPVINAAPMASWVQQLGEPLFGRITPDGWSLQSQAWTSSGQLARRFDVARSIGGAPKQLFRLEGDNQTPI PAPVQIDTRPSYRWLAPSLSAATRQALEQARSPAEWNGFLLSSPDFTYR >Mature_529_residues MFEQVGQAVGVDARVAHVRRTRGWRVLPLLIGSLYALTCTAAETPLTPSQMRWLQRATYGVDASSATQLTRLGPKRFGAL LLQPSDDAALPAPVGAQLQRFDALHTPLVALLTQYEADKVRLQSMPDGDEKVALRKEWQARGGQMLVQARQAQLLRAVYA PDQLREQLVWFWLNHFSVYADKARVKWMAADYMENAIRPNATGKFADLVMATLESPAMLEYLDNAKNAKGKVNENYAREL MELHTLGVHGGYGQQDVQQLALILTGAGLVPIKANGAPPLPPAAPGQAQVVRKGLFEFNPARHQPGDKMLLGQRIAGGGL DEIEHAVQVLVRQPACARFISQRLAEYFVSDAPPAALVTRMADTFQHSDGDIAKVMQTMLASPEFAQAQPRKFKDPNRFV VSAMRVAYEGQPVINAAPMASWVQQLGEPLFGRITPDGWSLQSQAWTSSGQLARRFDVARSIGGAPKQLFRLEGDNQTPI PAPVQIDTRPSYRWLAPSLSAATRQALEQARSPAEWNGFLLSSPDFTYR
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58263; Mature: 58263
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEQVGQAVGVDARVAHVRRTRGWRVLPLLIGSLYALTCTAAETPLTPSQMRWLQRATYG CCHHHHHHHCCCHHHHHHHHCCCCEEHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCC VDASSATQLTRLGPKRFGALLLQPSDDAALPAPVGAQLQRFDALHTPLVALLTQYEADKV CCCHHHHHHHHCCHHHHCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHH RLQSMPDGDEKVALRKEWQARGGQMLVQARQAQLLRAVYAPDQLREQLVWFWLNHFSVYA HCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH DKARVKWMAADYMENAIRPNATGKFADLVMATLESPAMLEYLDNAKNAKGKVNENYAREL HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHH MELHTLGVHGGYGQQDVQQLALILTGAGLVPIKANGAPPLPPAAPGQAQVVRKGLFEFNP HHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCC ARHQPGDKMLLGQRIAGGGLDEIEHAVQVLVRQPACARFISQRLAEYFVSDAPPAALVTR CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHH MADTFQHSDGDIAKVMQTMLASPEFAQAQPRKFKDPNRFVVSAMRVAYEGQPVINAAPMA HHHHHHCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHH SWVQQLGEPLFGRITPDGWSLQSQAWTSSGQLARRFDVARSIGGAPKQLFRLEGDNQTPI HHHHHHCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCHHHHEECCCCCCCC PAPVQIDTRPSYRWLAPSLSAATRQALEQARSPAEWNGFLLSSPDFTYR CCCEEECCCCCCEECCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCC >Mature Secondary Structure MFEQVGQAVGVDARVAHVRRTRGWRVLPLLIGSLYALTCTAAETPLTPSQMRWLQRATYG CCHHHHHHHCCCHHHHHHHHCCCCEEHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCC VDASSATQLTRLGPKRFGALLLQPSDDAALPAPVGAQLQRFDALHTPLVALLTQYEADKV CCCHHHHHHHHCCHHHHCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHH RLQSMPDGDEKVALRKEWQARGGQMLVQARQAQLLRAVYAPDQLREQLVWFWLNHFSVYA HCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH DKARVKWMAADYMENAIRPNATGKFADLVMATLESPAMLEYLDNAKNAKGKVNENYAREL HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHH MELHTLGVHGGYGQQDVQQLALILTGAGLVPIKANGAPPLPPAAPGQAQVVRKGLFEFNP HHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCC ARHQPGDKMLLGQRIAGGGLDEIEHAVQVLVRQPACARFISQRLAEYFVSDAPPAALVTR CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHH MADTFQHSDGDIAKVMQTMLASPEFAQAQPRKFKDPNRFVVSAMRVAYEGQPVINAAPMA HHHHHHCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHH SWVQQLGEPLFGRITPDGWSLQSQAWTSSGQLARRFDVARSIGGAPKQLFRLEGDNQTPI HHHHHHCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCHHHHEECCCCCCCC PAPVQIDTRPSYRWLAPSLSAATRQALEQARSPAEWNGFLLSSPDFTYR CCCEEECCCCCCEECCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA