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The map label for this gene is ptrR

Identifier: 78049637

GI number: 78049637

Start: 4677182

End: 4677934

Strand: Reverse

Name: ptrR

Synonym: XCV4081

Alternate gene names: NA

Gene position: 4677934-4677182 (Counterclockwise)

Preceding gene: 78049638

Following gene: 78049629

Centisome position: 90.33

GC content: 70.39

Gene sequence:

>753_bases
ATGACCACCATACCGCCCGACGAACACGCGCTGCACGCCTACGTCGATGGCCGCCTGACGCCGGAGCAACATGCAGCAGT
GGCAGCCTGGCTGCAGGCACATCCCGCTCAGGCCGCGCGCGTGGCGGCCTGGAAGCGCGATGCCGAAGCGCTGCGTGCCG
CACACGCCGGCCTGATGGCGGAGACTGGCGCCGTAGCCTTCACGCCTGCGGCGATTCGCCGTGGCTTGCAACAGCGCCGT
CGTGCCGCGTTTGCCGTGGCCGCCAGTTGCGTGCTGGCACTTGGCCTGGGTACCGGGCTGGGCTGGCAGCTGCATGCGAG
CCGGATCGCCAGCCAACGCGTGCCGATGGCCGATGCAGTGGCCGCCTACCGCCTGTTCGCCGATGCCGACGCGCATCGGG
GCGTTGGGTTGGACGTGCAGCGCCGCGCCGAGTTGGAACCGTGGTTGCGCACGCATTTCGGCAACGCAGGCGCGGTGCCG
GATCTGCGTGCGCAGGGGTATACGTTGCGCGGTGGGCAATTGCTGTCCACACCGGAAGGCGCGGCCGCGATGCTGGTCTA
CAGCGATGCCGACGGCGCACGCATTGGCCTGTATCTGCGTCCACGCAGCGGCCCGATGCCGACCGGCGAGCGCCGCGATG
GCCGGCTGTTGGCGCAGTACTGGGCCGAAGGCGACACCGCATTCGCGCTGGTCGGCCCCGCGACGCAGACACGCATGCGC
ACGATCGCGCCGTTGTTGCGTCGCCAGGGCTGA

Upstream 100 bases:

>100_bases
CGATCGGCACCGTGATGTCGCGCCTGTCGCGTGCGCGCGAACGCCTGCGTGCCGTGAACGAAGGCCAGGTGAATCACGCA
CCTGCATTGAGGATCCTGAA

Downstream 100 bases:

>100_bases
CCAGCGCAGCGCAAGCGTTGTGCTGGCCTCAGCCTGATTGCAGCGCTGCCCGCGCTCAGCCGCCGTAGCGTTGTTGCAGC
ATGGCGAACGCCGAGCGCAG

Product: transmembrane regulatory protein

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Transmembrane Regulator PrtR; Anti-Sigma Factor; Transmembrane Regulator; Transmembrane Protein; Transmembrane Activator Of PrtI; Transmembrane Transcription Activator Of PrtI; Transmembrane Regulatory Protein; Transmembrane Regulator Protein PrtR

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTTIPPDEHALHAYVDGRLTPEQHAAVAAWLQAHPAQAARVAAWKRDAEALRAAHAGLMAETGAVAFTPAAIRRGLQQRR
RAAFAVAASCVLALGLGTGLGWQLHASRIASQRVPMADAVAAYRLFADADAHRGVGLDVQRRAELEPWLRTHFGNAGAVP
DLRAQGYTLRGGQLLSTPEGAAAMLVYSDADGARIGLYLRPRSGPMPTGERRDGRLLAQYWAEGDTAFALVGPATQTRMR
TIAPLLRRQG

Sequences:

>Translated_250_residues
MTTIPPDEHALHAYVDGRLTPEQHAAVAAWLQAHPAQAARVAAWKRDAEALRAAHAGLMAETGAVAFTPAAIRRGLQQRR
RAAFAVAASCVLALGLGTGLGWQLHASRIASQRVPMADAVAAYRLFADADAHRGVGLDVQRRAELEPWLRTHFGNAGAVP
DLRAQGYTLRGGQLLSTPEGAAAMLVYSDADGARIGLYLRPRSGPMPTGERRDGRLLAQYWAEGDTAFALVGPATQTRMR
TIAPLLRRQG
>Mature_249_residues
TTIPPDEHALHAYVDGRLTPEQHAAVAAWLQAHPAQAARVAAWKRDAEALRAAHAGLMAETGAVAFTPAAIRRGLQQRRR
AAFAVAASCVLALGLGTGLGWQLHASRIASQRVPMADAVAAYRLFADADAHRGVGLDVQRRAELEPWLRTHFGNAGAVPD
LRAQGYTLRGGQLLSTPEGAAAMLVYSDADGARIGLYLRPRSGPMPTGERRDGRLLAQYWAEGDTAFALVGPATQTRMRT
IAPLLRRQG

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26749; Mature: 26618

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIPPDEHALHAYVDGRLTPEQHAAVAAWLQAHPAQAARVAAWKRDAEALRAAHAGLMA
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ETGAVAFTPAAIRRGLQQRRRAAFAVAASCVLALGLGTGLGWQLHASRIASQRVPMADAV
CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH
AAYRLFADADAHRGVGLDVQRRAELEPWLRTHFGNAGAVPDLRAQGYTLRGGQLLSTPEG
HHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEECCCEEECCCCC
AAAMLVYSDADGARIGLYLRPRSGPMPTGERRDGRLLAQYWAEGDTAFALVGPATQTRMR
CEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCHHHHHH
TIAPLLRRQG
HHHHHHHCCC
>Mature Secondary Structure 
TTIPPDEHALHAYVDGRLTPEQHAAVAAWLQAHPAQAARVAAWKRDAEALRAAHAGLMA
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ETGAVAFTPAAIRRGLQQRRRAAFAVAASCVLALGLGTGLGWQLHASRIASQRVPMADAV
CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH
AAYRLFADADAHRGVGLDVQRRAELEPWLRTHFGNAGAVPDLRAQGYTLRGGQLLSTPEG
HHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEECCCEEECCCCC
AAAMLVYSDADGARIGLYLRPRSGPMPTGERRDGRLLAQYWAEGDTAFALVGPATQTRMR
CEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCHHHHHH
TIAPLLRRQG
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA