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The map label for this gene is 78049554

Identifier: 78049554

GI number: 78049554

Start: 4589067

End: 4590230

Strand: Reverse

Name: 78049554

Synonym: XCV3998

Alternate gene names: NA

Gene position: 4590230-4589067 (Counterclockwise)

Preceding gene: 78049555

Following gene: 78049553

Centisome position: 88.64

GC content: 67.27

Gene sequence:

>1164_bases
ATGAACCTGTTTGCGCCACCGGCGTTGTTCCGTCACTTCCATCGCATGGCCTGGCTGGCCGCGTTGTTCACTGCAAGCAC
GATCCTGTTCGGGTCGTTCGTCCGTTTGTCCGATGCCGGCATGAGCTGCCCGGACTGGCCGACCTGCTACGGCCGCGTGA
CCTGGCCGCAGACCAGCGACGAAGCCAACACGCACGTGGCCAGCAAGATCCGCCCGCTGGAATCGCACAAGGCCTGGCGC
GAACAGGTCCACCGCTTCCTGGCCGGTGCGTTGGGCGTGGAAGTGCTGGTGCTGTCGTTGCTGGCGGTGCGTCGCCGTCG
CATGGGCATTGCCCAGGTGGTGTCGGCCGCGGTGCTGGTGGCGTTGTCGATCCCGCTCTATATGTCCGGCTGGCACGCCA
TGGCCTTCGGCGTGGCGATCGCCGGCGAGGCCATCCTGCTGCTGGCGGCATTGCGCTGGAGCAACATCGATCTGGCGCGT
GCAGCGGTGCTGACGCTGGCGGTGGTGATTTTCCAGGCGTTGCTGGGCATGTGGACGGTGACGTTGCTGCTCAAGCCGAT
CGTGGTGATGGGGCACCTGCTGGGCGGCATGCTGATGTTCTCGCTGCTTGTGTGGATGGCCTGGCGCGCGACGCATCTGC
CGATCACCCTGGCCGATGCATCGCGCTTGAAGTGGCTGCTGCGCCTGGGCGTGGCGGTGCTGGGCCTGCAGATCGCGCTT
GGTGGCTGGGTCAGCGCCAACTACGCCGCGCTGGCGTGTGGCGGCGGCAGCTGGTCGGCCGACAACTTCCCGCGCTGCGT
CAGCCAGTGGTGGCCGCCGCACGATTTCCGTGAAGGTTTCACGCTGTGGCGCGGCATCGGAGTGGATTACGAAGGTGGCG
TGCTGGACGGTGCGGCGCGTATCGCGATCCAGATGGCGCATCGGCTATGGGCAATTGCGACCGCGCTGTACTTGTGGTGG
CTGGCCTGGCGCTTGTCGCGTTCGCCGGGCATGCGGGTGTGGGCCGGCGCATTGGCGCTGCTGGTGGCCGTGCAGGTGAC
CCTGGGCATGCTCAACGTGAAGCTGGCGCTGCCGCTGGAGGTCTCGGTCATGCATAACGGCGGGGCGGTGGCGTTGCTGT
TCGTGCTGGTCTCGCTGCTGGCGCGGCTGCGCGCGCCGGAGTGA

Upstream 100 bases:

>100_bases
CCCAATGGCTTTGTGATCCTGCGGTATGCCCCCGGTTTCGACCCGGCCGGCCTGCGGTCGGATCTGGTCAAGCTGCTGAA
ACTGATGTGAGCCCGTTTCG

Downstream 100 bases:

>100_bases
GCATGGCTGTCAGCGCACGCGATTATTGGGATCTGACCAAACCCAAGGTGGTGGCACTGATCGTGTTCACCGCGTTGGTG
GGCATGTTCCTGGCCATTCC

Product: putative cytochrome oxidase assembly protein

Products: NA

Alternate protein names: Cytochrome Oxidase Assembly Protein; Cytochrome C Oxidase Assembly Protein; Cytochrome Oxidase Assembly Family Protein/ Protein FtsY; Protein Required For Cytochrome Oxidase Assembly; Cytochrome Aa3 Oxidase Assembly Protein; Cytochrome Aa3 Oxidase Assembly Protein Related CtaA; Heme O Oxygenase Transmembrane Protein; Heme A Synthase Cytochrome Oxidase Biogenesis -CtaA; Cytochrome Oxidase Assembly Family Protein; Cytochrome C Oxidase Subunit XV Assembly Protein; Heme O Monooxygenase; Heme O Oxygenase; HemeA Synthase

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MNLFAPPALFRHFHRMAWLAALFTASTILFGSFVRLSDAGMSCPDWPTCYGRVTWPQTSDEANTHVASKIRPLESHKAWR
EQVHRFLAGALGVEVLVLSLLAVRRRRMGIAQVVSAAVLVALSIPLYMSGWHAMAFGVAIAGEAILLLAALRWSNIDLAR
AAVLTLAVVIFQALLGMWTVTLLLKPIVVMGHLLGGMLMFSLLVWMAWRATHLPITLADASRLKWLLRLGVAVLGLQIAL
GGWVSANYAALACGGGSWSADNFPRCVSQWWPPHDFREGFTLWRGIGVDYEGGVLDGAARIAIQMAHRLWAIATALYLWW
LAWRLSRSPGMRVWAGALALLVAVQVTLGMLNVKLALPLEVSVMHNGGAVALLFVLVSLLARLRAPE

Sequences:

>Translated_387_residues
MNLFAPPALFRHFHRMAWLAALFTASTILFGSFVRLSDAGMSCPDWPTCYGRVTWPQTSDEANTHVASKIRPLESHKAWR
EQVHRFLAGALGVEVLVLSLLAVRRRRMGIAQVVSAAVLVALSIPLYMSGWHAMAFGVAIAGEAILLLAALRWSNIDLAR
AAVLTLAVVIFQALLGMWTVTLLLKPIVVMGHLLGGMLMFSLLVWMAWRATHLPITLADASRLKWLLRLGVAVLGLQIAL
GGWVSANYAALACGGGSWSADNFPRCVSQWWPPHDFREGFTLWRGIGVDYEGGVLDGAARIAIQMAHRLWAIATALYLWW
LAWRLSRSPGMRVWAGALALLVAVQVTLGMLNVKLALPLEVSVMHNGGAVALLFVLVSLLARLRAPE
>Mature_387_residues
MNLFAPPALFRHFHRMAWLAALFTASTILFGSFVRLSDAGMSCPDWPTCYGRVTWPQTSDEANTHVASKIRPLESHKAWR
EQVHRFLAGALGVEVLVLSLLAVRRRRMGIAQVVSAAVLVALSIPLYMSGWHAMAFGVAIAGEAILLLAALRWSNIDLAR
AAVLTLAVVIFQALLGMWTVTLLLKPIVVMGHLLGGMLMFSLLVWMAWRATHLPITLADASRLKWLLRLGVAVLGLQIAL
GGWVSANYAALACGGGSWSADNFPRCVSQWWPPHDFREGFTLWRGIGVDYEGGVLDGAARIAIQMAHRLWAIATALYLWW
LAWRLSRSPGMRVWAGALALLVAVQVTLGMLNVKLALPLEVSVMHNGGAVALLFVLVSLLARLRAPE

Specific function: Unknown

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42348; Mature: 42348

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLFAPPALFRHFHRMAWLAALFTASTILFGSFVRLSDAGMSCPDWPTCYGRVTWPQTSD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCC
EANTHVASKIRPLESHKAWREQVHRFLAGALGVEVLVLSLLAVRRRRMGIAQVVSAAVLV
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSIPLYMSGWHAMAFGVAIAGEAILLLAALRWSNIDLARAAVLTLAVVIFQALLGMWTV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLLLKPIVVMGHLLGGMLMFSLLVWMAWRATHLPITLADASRLKWLLRLGVAVLGLQIAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHH
GGWVSANYAALACGGGSWSADNFPRCVSQWWPPHDFREGFTLWRGIGVDYEGGVLDGAAR
CCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH
IAIQMAHRLWAIATALYLWWLAWRLSRSPGMRVWAGALALLVAVQVTLGMLNVKLALPLE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCEE
VSVMHNGGAVALLFVLVSLLARLRAPE
EEEEECCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLFAPPALFRHFHRMAWLAALFTASTILFGSFVRLSDAGMSCPDWPTCYGRVTWPQTSD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCC
EANTHVASKIRPLESHKAWREQVHRFLAGALGVEVLVLSLLAVRRRRMGIAQVVSAAVLV
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSIPLYMSGWHAMAFGVAIAGEAILLLAALRWSNIDLARAAVLTLAVVIFQALLGMWTV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLLLKPIVVMGHLLGGMLMFSLLVWMAWRATHLPITLADASRLKWLLRLGVAVLGLQIAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHH
GGWVSANYAALACGGGSWSADNFPRCVSQWWPPHDFREGFTLWRGIGVDYEGGVLDGAAR
CCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH
IAIQMAHRLWAIATALYLWWLAWRLSRSPGMRVWAGALALLVAVQVTLGMLNVKLALPLE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCEE
VSVMHNGGAVALLFVLVSLLARLRAPE
EEEEECCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA