| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049497
Identifier: 78049497
GI number: 78049497
Start: 4524137
End: 4524670
Strand: Reverse
Name: 78049497
Synonym: XCV3941
Alternate gene names: NA
Gene position: 4524670-4524137 (Counterclockwise)
Preceding gene: 78049498
Following gene: 78049495
Centisome position: 87.37
GC content: 72.85
Gene sequence:
>534_bases TTGCCGACGCCGCTGGAAGAATCGGCCGCTGCGCCGGCCGCGTCCACCTCCGCTGCCGCAGTGCCGAATACATCGCCGAG CGCCGCGCAGCAACGCGCACGCTGGGCGGCGATGACGCCTGCGCAGCAAGCCGAGCTGCGTGCCCGCTATGCCGCCTGGA AGGGGCTGACGGCCACCGACCGGGTGGTGTTGCGCCAGGCACGCGAGCGGCTGCAGGCCTTGCCCGAGGATCAGCAACGC GCGCTGCGCACCCAGTTCGGCGCGATGGATCGCCTGCATCGCGACGGCTGGCGCCTGGGCTCGCAGGTGGGGGCGTTCTA TGCCCAGTTGCAGCCGTTGATCGGCTACGTGCAGCCCGCCCAGCGCGAGGCCATGCTGGCCGCGCTGCGCAGCCTGGACG CCGGCCAGCTGGAGCAACTGGCGGTGCTGGCACAGCGCACCCCGCCCCAGGAGCGCGACCGCCTGCGCGAGGCCTTCCTG GCCGAAGCGCCGGCCACGCGCAGCATCTGGTTGAAGCGCCAACTGGCGCGTTGA
Upstream 100 bases:
>100_bases GAGCAACCTTCCGCCCCTCTGGAGACGGTCGATGATGAAACCAACTGACTGGTGCGGCCTGCTGCTCTGCGCGTTTGCCG GCGTCGCCGGCGCGCAGCGC
Downstream 100 bases:
>100_bases TCGCTCGCGTGCCGTCGGCGCGCGCAATGCCTTTCAGTGTTGCGCCGGTCATATCCGTTCTAGCGGTGCCTGCCCCATAG CGCCGCTTCAGACGCGCCGC
Product: putative secreted protein
Products: NA
Alternate protein names: Peptidase Protein
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MPTPLEESAAAPAASTSAAAVPNTSPSAAQQRARWAAMTPAQQAELRARYAAWKGLTATDRVVLRQARERLQALPEDQQR ALRTQFGAMDRLHRDGWRLGSQVGAFYAQLQPLIGYVQPAQREAMLAALRSLDAGQLEQLAVLAQRTPPQERDRLREAFL AEAPATRSIWLKRQLAR
Sequences:
>Translated_177_residues MPTPLEESAAAPAASTSAAAVPNTSPSAAQQRARWAAMTPAQQAELRARYAAWKGLTATDRVVLRQARERLQALPEDQQR ALRTQFGAMDRLHRDGWRLGSQVGAFYAQLQPLIGYVQPAQREAMLAALRSLDAGQLEQLAVLAQRTPPQERDRLREAFL AEAPATRSIWLKRQLAR >Mature_176_residues PTPLEESAAAPAASTSAAAVPNTSPSAAQQRARWAAMTPAQQAELRARYAAWKGLTATDRVVLRQARERLQALPEDQQRA LRTQFGAMDRLHRDGWRLGSQVGAFYAQLQPLIGYVQPAQREAMLAALRSLDAGQLEQLAVLAQRTPPQERDRLREAFLA EAPATRSIWLKRQLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19578; Mature: 19446
Theoretical pI: Translated: 11.58; Mature: 11.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPLEESAAAPAASTSAAAVPNTSPSAAQQRARWAAMTPAQQAELRARYAAWKGLTATD CCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHH RVVLRQARERLQALPEDQQRALRTQFGAMDRLHRDGWRLGSQVGAFYAQLQPLIGYVQPA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QREAMLAALRSLDAGQLEQLAVLAQRTPPQERDRLREAFLAEAPATRSIWLKRQLAR HHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure PTPLEESAAAPAASTSAAAVPNTSPSAAQQRARWAAMTPAQQAELRARYAAWKGLTATD CCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHH RVVLRQARERLQALPEDQQRALRTQFGAMDRLHRDGWRLGSQVGAFYAQLQPLIGYVQPA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QREAMLAALRSLDAGQLEQLAVLAQRTPPQERDRLREAFLAEAPATRSIWLKRQLAR HHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA