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The map label for this gene is 78049475

Identifier: 78049475

GI number: 78049475

Start: 4498379

End: 4498687

Strand: Reverse

Name: 78049475

Synonym: XCV3919

Alternate gene names: NA

Gene position: 4498687-4498379 (Counterclockwise)

Preceding gene: 78049476

Following gene: 78049471

Centisome position: 86.87

GC content: 64.08

Gene sequence:

>309_bases
ATGCGTACACGCCGTCCTGCCGCCGAGCAGTTGCCTGCCGATGAGCTGTTTCGTTCGCGTCTGGAGAACCAGATCGACTT
GCGCCATCCACTGGTCCAGCTGATTCATCGGCTGCCGTGGAGTGCGTTGGAGCAGGCGCTGTCGCCGCGGTTGCCGGCTA
CCCCCGGCACAGGCGGTCGGCCCGCACTGCCGGTGCGCCTGATCGCCGGCTTGCTCTACCTCAAGCACGCCTACGGCCTG
TCCGATGAAGCGGTGTGCGAGCGCTGGCTGGAAAATCCTTATTGGCAGTTCTTCACCGGTGAGTACTGA

Upstream 100 bases:

>100_bases
CCCCAGACCACATCCATTGCAAGGCTTCATCTGCGTTATCGGTGTGCTGGAATTGCCAGTTTTCGTTACGCTACGTCCTG
GTTTCTGGCAGTTTTCGCCC

Downstream 100 bases:

>100_bases
GCGCTAACGCTGATCACCAGCGCAGCTTGCGCCGTGCCAGCGCGGCACCGAGTTGCGCCTGCAGCGCCTGCGCCTGGGCA
AGCGGCACAAAGCGCAGCCG

Product: IS1478 transposase

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MRTRRPAAEQLPADELFRSRLENQIDLRHPLVQLIHRLPWSALEQALSPRLPATPGTGGRPALPVRLIAGLLYLKHAYGL
SDEAVCERWLENPYWQFFTGEY

Sequences:

>Translated_102_residues
MRTRRPAAEQLPADELFRSRLENQIDLRHPLVQLIHRLPWSALEQALSPRLPATPGTGGRPALPVRLIAGLLYLKHAYGL
SDEAVCERWLENPYWQFFTGEY
>Mature_102_residues
MRTRRPAAEQLPADELFRSRLENQIDLRHPLVQLIHRLPWSALEQALSPRLPATPGTGGRPALPVRLIAGLLYLKHAYGL
SDEAVCERWLENPYWQFFTGEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008490 [H]

Pfam domain/function: PF05598 DUF772 [H]

EC number: NA

Molecular weight: Translated: 11748; Mature: 11748

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRRPAAEQLPADELFRSRLENQIDLRHPLVQLIHRLPWSALEQALSPRLPATPGTGGR
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC
PALPVRLIAGLLYLKHAYGLSDEAVCERWLENPYWQFFTGEY
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRTRRPAAEQLPADELFRSRLENQIDLRHPLVQLIHRLPWSALEQALSPRLPATPGTGGR
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC
PALPVRLIAGLLYLKHAYGLSDEAVCERWLENPYWQFFTGEY
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8429568 [H]