| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049476
Identifier: 78049476
GI number: 78049476
Start: 4498951
End: 4500006
Strand: Reverse
Name: 78049476
Synonym: XCV3920
Alternate gene names: NA
Gene position: 4500006-4498951 (Counterclockwise)
Preceding gene: 78049478
Following gene: 78049475
Centisome position: 86.9
GC content: 66.86
Gene sequence:
>1056_bases ATGGCCGATTACCTGCTGTTCGCAACGGAGCGTTACGCGTTGCCTATTCTGGCGCCATTGGCGCAGGCGTTACAGGGCTG CGGGCACGTGGTGTCGGCCTGGTTCGAAAGTGGCGCGCGCGGGCTGGCGCTGCCGGGCGTGCGTGAGGTTGGCCTGCGCG AGGCGCTGGCGCTGCGCCCGCGTGCGGTATTCAGTGCCGCCAACTGGGTGCCACCGTTTGTGTCGGGCGCGAAAGTGCAG CTGTTTCACGGTTTCAATGTGCAAAAGCGCGAGGACAACCGCGGCCATTTCCGGGTGCGTGGCCTGTTCGATCTGTACTG CACGCAAGGCCCCGCCACCACCGCGCCGTTCCGCGCGCTGGCGCAGCGCGAGGGCCATTTTGCCGTGGTGGAGACCGGCT GGCCCAAGCTCGACCCGGTCTTTCGCGACGATGGCGGCCGTAGCGCGGCCTTGCGTGCACCGGCCGCCGGCCGCCCGGTG ATCCTGTTCGGTTCCACCTTTACCGAGCGCCTGAGCGCGGCGCCCGCACTCTACGACGAGATCGCCGCCGACATCGCGCG CGGCGCGCATTACTGGTTGCTGACCTTGCACCCGAAGTGCGCGCAGGAATTGTTCGATCGCTATCGCGCACTGGCAGGCG CCAACGCACGCTTCATCGAACCCGAAGAGGTCATGGCCGCGCAACGTGCGGCCGATGTGCTGGTTTCCGATACCTCGTCG ATCGTGTCCGAGTTCGTGGTGCAGCACAAACCGGTGGTGACCTTTCGCAACCGTGTGCCGCAGCCGCACATGCTCGACTT CCGGCAGGCAGAGCACTTGCCGCAGCAGCTGGCGCGCGCGCTGGCGCCGGATGCGGCATTGCGTAGCGCGCTTGCCAGTT ACGCCGATGCGATTCACCCGTATCGCGACGGGCATTCTTCCGAACGAGTGATTGCCGCCACTGAAGACTTCATTGCCGGC AAGCTCGGCGGGCTGCGTCGCAAACCGCTGGGTGCAGTGTGGCGCGGGTTGCAGATCCGTCGCGAGTTGGGCTACTGGGG GCCGGCGCAGCGCTGA
Upstream 100 bases:
>100_bases GCGAGGCCAGACAGTCGCGTAGGCGATCGGCCTCGTTGAACGCGATAATGCAGGCGCTGATGCGCGGCCGTTCGTCGGGT GCGGTCGAAGAGGACATGTG
Downstream 100 bases:
>100_bases GCGCGATCAGCGGCAACGAGCGGGTGGTGATGATCGGCGACGTTTTGCCGAACTTACGTCCTTGTCATTGATCAGATCAC TGACCCGGATTGCGACTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MADYLLFATERYALPILAPLAQALQGCGHVVSAWFESGARGLALPGVREVGLREALALRPRAVFSAANWVPPFVSGAKVQ LFHGFNVQKREDNRGHFRVRGLFDLYCTQGPATTAPFRALAQREGHFAVVETGWPKLDPVFRDDGGRSAALRAPAAGRPV ILFGSTFTERLSAAPALYDEIAADIARGAHYWLLTLHPKCAQELFDRYRALAGANARFIEPEEVMAAQRAADVLVSDTSS IVSEFVVQHKPVVTFRNRVPQPHMLDFRQAEHLPQQLARALAPDAALRSALASYADAIHPYRDGHSSERVIAATEDFIAG KLGGLRRKPLGAVWRGLQIRRELGYWGPAQR
Sequences:
>Translated_351_residues MADYLLFATERYALPILAPLAQALQGCGHVVSAWFESGARGLALPGVREVGLREALALRPRAVFSAANWVPPFVSGAKVQ LFHGFNVQKREDNRGHFRVRGLFDLYCTQGPATTAPFRALAQREGHFAVVETGWPKLDPVFRDDGGRSAALRAPAAGRPV ILFGSTFTERLSAAPALYDEIAADIARGAHYWLLTLHPKCAQELFDRYRALAGANARFIEPEEVMAAQRAADVLVSDTSS IVSEFVVQHKPVVTFRNRVPQPHMLDFRQAEHLPQQLARALAPDAALRSALASYADAIHPYRDGHSSERVIAATEDFIAG KLGGLRRKPLGAVWRGLQIRRELGYWGPAQR >Mature_350_residues ADYLLFATERYALPILAPLAQALQGCGHVVSAWFESGARGLALPGVREVGLREALALRPRAVFSAANWVPPFVSGAKVQL FHGFNVQKREDNRGHFRVRGLFDLYCTQGPATTAPFRALAQREGHFAVVETGWPKLDPVFRDDGGRSAALRAPAAGRPVI LFGSTFTERLSAAPALYDEIAADIARGAHYWLLTLHPKCAQELFDRYRALAGANARFIEPEEVMAAQRAADVLVSDTSSI VSEFVVQHKPVVTFRNRVPQPHMLDFRQAEHLPQQLARALAPDAALRSALASYADAIHPYRDGHSSERVIAATEDFIAGK LGGLRRKPLGAVWRGLQIRRELGYWGPAQR
Specific function: Unknown
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38604; Mature: 38472
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADYLLFATERYALPILAPLAQALQGCGHVVSAWFESGARGLALPGVREVGLREALALRP CCCEEEEECCHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC RAVFSAANWVPPFVSGAKVQLFHGFNVQKREDNRGHFRVRGLFDLYCTQGPATTAPFRAL HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHH AQREGHFAVVETGWPKLDPVFRDDGGRSAALRAPAAGRPVILFGSTFTERLSAAPALYDE HHCCCCEEEEECCCCCCCCCEECCCCCCEEEECCCCCCCEEEECCHHHHHHHHCHHHHHH IAADIARGAHYWLLTLHPKCAQELFDRYRALAGANARFIEPEEVMAAQRAADVLVSDTSS HHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHH IVSEFVVQHKPVVTFRNRVPQPHMLDFRQAEHLPQQLARALAPDAALRSALASYADAIHP HHHHHHHHCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC YRDGHSSERVIAATEDFIAGKLGGLRRKPLGAVWRGLQIRRELGYWGPAQR CCCCCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ADYLLFATERYALPILAPLAQALQGCGHVVSAWFESGARGLALPGVREVGLREALALRP CCEEEEECCHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC RAVFSAANWVPPFVSGAKVQLFHGFNVQKREDNRGHFRVRGLFDLYCTQGPATTAPFRAL HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHH AQREGHFAVVETGWPKLDPVFRDDGGRSAALRAPAAGRPVILFGSTFTERLSAAPALYDE HHCCCCEEEEECCCCCCCCCEECCCCCCEEEECCCCCCCEEEECCHHHHHHHHCHHHHHH IAADIARGAHYWLLTLHPKCAQELFDRYRALAGANARFIEPEEVMAAQRAADVLVSDTSS HHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHH IVSEFVVQHKPVVTFRNRVPQPHMLDFRQAEHLPQQLARALAPDAALRSALASYADAIHP HHHHHHHHCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC YRDGHSSERVIAATEDFIAGKLGGLRRKPLGAVWRGLQIRRELGYWGPAQR CCCCCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA