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The map label for this gene is fct [H]

Identifier: 78049431

GI number: 78049431

Start: 4459862

End: 4462003

Strand: Reverse

Name: fct [H]

Synonym: XCV3875

Alternate gene names: 78049431

Gene position: 4462003-4459862 (Counterclockwise)

Preceding gene: 78049432

Following gene: 78049426

Centisome position: 86.16

GC content: 64.66

Gene sequence:

>2142_bases
ATGCCCGTGTTCTCGCGCCACCGCACGCTGCACGCGCTGCCCCTGCTCAGCCTGCTGGCCTGCACCTGCGGCACTGCCTG
CGCGCAGGCTGCGCAGTCGCAGGCGCGCGACCTGGATGCGGTGCAGGTGCGCAGCCAATACACGCCGTACCGCGCGCTGA
GCATTACCGGTGCCACCAAGACCGATGCGCCGCTGCGTGATCTGCCGATCAGTGCACGGGTACTCGACCGGACCTTGCTC
GAAGATGCAGGCGTCACCGATCTGGCTGGCGCACTGGAACTGGCCAGCGGCATCACCAAGGCCAACAACCTGGGCGGCCT
ATGGGATAGCTATTCGATGCGCGGCTTCACCGGCGATCCGAATTTCAGTTCGGATTACATGGTCAACGGCTTCAATGCCA
GCCGCGGTTACAACGGTCTGCGCGATGCGGCCAATACACAGAGCATCGAGGTGATCAAGGGGCCGGCGTCGGCGTTGTAC
GGGCGCGGCGAGCCGGGCGGGGCCGTCAACATCGTCACCAAAAAGCCGCTGTTTCAGCCGCAGCACAGCGTGGATGTATC
GGCAGGCCGCTTCGACAGCTATCGCGCGGCCATCGATAGCACCGGCCCGCTGAGCGAGAACGTGGCGTACCGTTTGAATG
TGATGCACAAGGATCAACACAGCTTTCGCGATACCGTCGACAGCGACAGTACCTTGCTGGCGCCGTCGCTGTTGTGGATG
CCGACGCCCGATACGACAGTGTCGTATGAGCTGGAAGCGGTGCGGCTCCACACGCCCTTCGATCGTGGCGTGACGGCCAT
CGGTGGCGATGCCAACCGGCTGCCGGCCTCGCGCTTTCTGGGCGAGCCGCGCGATGGCGATATCGACCTGCATTCCACCG
GGCACCAGCTATTCGTGGTGCACGGTCTGGATCAGACCTGGTCGGTGCAGGGTGGGGCAACTTACCGCGACAGTGGCATG
CGCGGATTTTCCACCGAGCCCTGGACGCTGCAGGCCGACCAGCGCAGCTTGCGCCGCGAACGCCGCTACCGCGATTACCA
GGGCCGCGATATCGCAGCGCGTGCAGAAGTACTTGGCAGTCTTCAGGCCGGTAGGGTCACGCACAATGTGTTGTTCGGCA
TCGATGGCAATCGCTTCGACGACAGCCGCTTTCAGCAGCGCGCCCGTTCCGCGGCCACGCCCTACAGCATCGATGTGCTG
GCGCCGCGTTATGGCCTGGCACAGCCAGGACGGCTGTCCACCATCACCGCTACCGACGAACGCCAGCAGGTGTGGGGTGT
GTACGCGCAGGACCAGATCGACCTGGGCGCGCGCTGGAAGGCCTTGCTTGGCCTGCGCTACGACCACTATCGGCAAGACC
TGGACAACCACTTGCGCGGCACCACGCAGCGGGCATCCGACGGCGTGGCGAGCCCGCGTGCAGGCATGACCTTCCATGTC
GACGATGCGCTGTCGCTGTACGCCAGTGCGGCGGCGGGTTTTCGCCCCAACAGCGGTGTGGGCGCCAACGGGCAAAGCTT
TGCACCCGAGAAAAGCCGCTCGCTGGAGACCGGCTTGAAATACGTGCAGCCCGGCGATGGCCTGGAAGCCACCGTGGCCG
CATTCCGCATCGACAAGAAAAACGTGTTGAGCCTGGATCCGGCCGACACCAGTTTTTCGCTGCCGGTGGGCCAGATGCGC
AGCCAGGGCGTGGAGCTGGATCTGCTGGGTAGGTTGAGCACGCACCTGGCCGCGTCGGTGGGCCTGGCCTATACCGATTC
GCAGGTGACGCGCAGCAGTGCTGCTGCCGCCAGTACGGGGCTGGCTGAAGGCCGGCGGTTTCCGAATGTGCCGCGTTTGA
GCGGTAACGCATTCCTGAACTACGAGCAGCCGCTGACCGGCAAACGAAGCGCGGCGCTGGGTGTGGGCGTCTTGCACACC
GGCGAGCGGCTGGGCTCGGTGGATAGCAACACCGATTTCGTGTTGCCGGCTTACACCGTGTGGCGAGCGGTTGGCCATTA
CGATCTGAGCCAGAGGCTACGCCTGTATGCCAAGGTGGAAAACCTCACCGACCGCCGTTACGCGGCGTTTTCGTACAGCG
AGCAATGGGTGTATCCCGGTGCGCCGCGGAGCTGGACGGTAGGTGCGCAATTGCGGTTTTGA

Upstream 100 bases:

>100_bases
CCGGCCCTGCTTCATAGCGGTATCTGCGTTTCACCTTTCCTTGCGTCTTTTACTTGCGCCCCGGATGCACTGCGCCGGGG
CGCTTCAGGAGTTCTGCCCG

Downstream 100 bases:

>100_bases
GCGATGCTCCACGGCGGCCGAAGCGGCGATCGGCGCATGCGCCAGCGTGGTGGATGTCAGCGTTACCGACGGTCGCCACG
TTCCAATTGAATACGCTTCG

Product: TonB-dependent outer membrane receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 713; Mature: 712

Protein sequence:

>713_residues
MPVFSRHRTLHALPLLSLLACTCGTACAQAAQSQARDLDAVQVRSQYTPYRALSITGATKTDAPLRDLPISARVLDRTLL
EDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDPNFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALY
GRGEPGGAVNIVTKKPLFQPQHSVDVSAGRFDSYRAAIDSTGPLSENVAYRLNVMHKDQHSFRDTVDSDSTLLAPSLLWM
PTPDTTVSYELEAVRLHTPFDRGVTAIGGDANRLPASRFLGEPRDGDIDLHSTGHQLFVVHGLDQTWSVQGGATYRDSGM
RGFSTEPWTLQADQRSLRRERRYRDYQGRDIAARAEVLGSLQAGRVTHNVLFGIDGNRFDDSRFQQRARSAATPYSIDVL
APRYGLAQPGRLSTITATDERQQVWGVYAQDQIDLGARWKALLGLRYDHYRQDLDNHLRGTTQRASDGVASPRAGMTFHV
DDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKKNVLSLDPADTSFSLPVGQMR
SQGVELDLLGRLSTHLAASVGLAYTDSQVTRSSAAAASTGLAEGRRFPNVPRLSGNAFLNYEQPLTGKRSAALGVGVLHT
GERLGSVDSNTDFVLPAYTVWRAVGHYDLSQRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGAQLRF

Sequences:

>Translated_713_residues
MPVFSRHRTLHALPLLSLLACTCGTACAQAAQSQARDLDAVQVRSQYTPYRALSITGATKTDAPLRDLPISARVLDRTLL
EDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDPNFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALY
GRGEPGGAVNIVTKKPLFQPQHSVDVSAGRFDSYRAAIDSTGPLSENVAYRLNVMHKDQHSFRDTVDSDSTLLAPSLLWM
PTPDTTVSYELEAVRLHTPFDRGVTAIGGDANRLPASRFLGEPRDGDIDLHSTGHQLFVVHGLDQTWSVQGGATYRDSGM
RGFSTEPWTLQADQRSLRRERRYRDYQGRDIAARAEVLGSLQAGRVTHNVLFGIDGNRFDDSRFQQRARSAATPYSIDVL
APRYGLAQPGRLSTITATDERQQVWGVYAQDQIDLGARWKALLGLRYDHYRQDLDNHLRGTTQRASDGVASPRAGMTFHV
DDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKKNVLSLDPADTSFSLPVGQMR
SQGVELDLLGRLSTHLAASVGLAYTDSQVTRSSAAAASTGLAEGRRFPNVPRLSGNAFLNYEQPLTGKRSAALGVGVLHT
GERLGSVDSNTDFVLPAYTVWRAVGHYDLSQRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGAQLRF
>Mature_712_residues
PVFSRHRTLHALPLLSLLACTCGTACAQAAQSQARDLDAVQVRSQYTPYRALSITGATKTDAPLRDLPISARVLDRTLLE
DAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDPNFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALYG
RGEPGGAVNIVTKKPLFQPQHSVDVSAGRFDSYRAAIDSTGPLSENVAYRLNVMHKDQHSFRDTVDSDSTLLAPSLLWMP
TPDTTVSYELEAVRLHTPFDRGVTAIGGDANRLPASRFLGEPRDGDIDLHSTGHQLFVVHGLDQTWSVQGGATYRDSGMR
GFSTEPWTLQADQRSLRRERRYRDYQGRDIAARAEVLGSLQAGRVTHNVLFGIDGNRFDDSRFQQRARSAATPYSIDVLA
PRYGLAQPGRLSTITATDERQQVWGVYAQDQIDLGARWKALLGLRYDHYRQDLDNHLRGTTQRASDGVASPRAGMTFHVD
DALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKKNVLSLDPADTSFSLPVGQMRS
QGVELDLLGRLSTHLAASVGLAYTDSQVTRSSAAAASTGLAEGRRFPNVPRLSGNAFLNYEQPLTGKRSAALGVGVLHTG
ERLGSVDSNTDFVLPAYTVWRAVGHYDLSQRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGAQLRF

Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=708, Percent_Identity=24.8587570621469, Blast_Score=164, Evalue=2e-41,
Organism=Escherichia coli, GI1787024, Length=784, Percent_Identity=23.8520408163265, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI1787344, Length=771, Percent_Identity=23.8651102464332, Blast_Score=109, Evalue=7e-25,
Organism=Escherichia coli, GI1790743, Length=305, Percent_Identity=24.9180327868852, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 77591; Mature: 77460

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVFSRHRTLHALPLLSLLACTCGTACAQAAQSQARDLDAVQVRSQYTPYRALSITGATK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCC
TDAPLRDLPISARVLDRTLLEDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDP
CCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
NFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALYGRGEPGGAVNIVTKKPLFQP
CCCCCCEEECCCCCCCCCHHHHCCCCCCEEEEECCHHHHCCCCCCCCEEEEEECCCCCCC
QHSVDVSAGRFDSYRAAIDSTGPLSENVAYRLNVMHKDQHSFRDTVDSDSTLLAPSLLWM
CCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCHHHHHHCCCCCCEEECCEEEEE
PTPDTTVSYELEAVRLHTPFDRGVTAIGGDANRLPASRFLGEPRDGDIDLHSTGHQLFVV
CCCCCEEEEEEEEEEEECCHHCCCEEECCCCCCCCHHHHCCCCCCCCEEEECCCCEEEEE
HGLDQTWSVQGGATYRDSGMRGFSTEPWTLQADQRSLRRERRYRDYQGRDIAARAEVLGS
ECCCCEEECCCCCEECCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LQAGRVTHNVLFGIDGNRFDDSRFQQRARSAATPYSIDVLAPRYGLAQPGRLSTITATDE
HHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCC
RQQVWGVYAQDQIDLGARWKALLGLRYDHYRQDLDNHLRGTTQRASDGVASPRAGMTFHV
HHHHHEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEE
DDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHEEEEEEECCC
NVLSLDPADTSFSLPVGQMRSQGVELDLLGRLSTHLAASVGLAYTDSQVTRSSAAAASTG
CEEEECCCCCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHH
LAEGRRFPNVPRLSGNAFLNYEQPLTGKRSAALGVGVLHTGERLGSVDSNTDFVLPAYTV
HHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHEEEEEEECCHHHCCCCCCCCEEEHHHHH
WRAVGHYDLSQRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGAQLRF
HHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCEEECEEECC
>Mature Secondary Structure 
PVFSRHRTLHALPLLSLLACTCGTACAQAAQSQARDLDAVQVRSQYTPYRALSITGATK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCC
TDAPLRDLPISARVLDRTLLEDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDP
CCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
NFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALYGRGEPGGAVNIVTKKPLFQP
CCCCCCEEECCCCCCCCCHHHHCCCCCCEEEEECCHHHHCCCCCCCCEEEEEECCCCCCC
QHSVDVSAGRFDSYRAAIDSTGPLSENVAYRLNVMHKDQHSFRDTVDSDSTLLAPSLLWM
CCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCHHHHHHCCCCCCEEECCEEEEE
PTPDTTVSYELEAVRLHTPFDRGVTAIGGDANRLPASRFLGEPRDGDIDLHSTGHQLFVV
CCCCCEEEEEEEEEEEECCHHCCCEEECCCCCCCCHHHHCCCCCCCCEEEECCCCEEEEE
HGLDQTWSVQGGATYRDSGMRGFSTEPWTLQADQRSLRRERRYRDYQGRDIAARAEVLGS
ECCCCEEECCCCCEECCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LQAGRVTHNVLFGIDGNRFDDSRFQQRARSAATPYSIDVLAPRYGLAQPGRLSTITATDE
HHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCC
RQQVWGVYAQDQIDLGARWKALLGLRYDHYRQDLDNHLRGTTQRASDGVASPRAGMTFHV
HHHHHEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEE
DDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHEEEEEEECCC
NVLSLDPADTSFSLPVGQMRSQGVELDLLGRLSTHLAASVGLAYTDSQVTRSSAAAASTG
CEEEECCCCCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHH
LAEGRRFPNVPRLSGNAFLNYEQPLTGKRSAALGVGVLHTGERLGSVDSNTDFVLPAYTV
HHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHEEEEEEECCHHHCCCCCCCCEEEHHHHH
WRAVGHYDLSQRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGAQLRF
HHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCEEECEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8576065 [H]