Definition Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome.
Accession NC_007508
Length 5,178,466

Click here to switch to the map view.

The map label for this gene is 78049426

Identifier: 78049426

GI number: 78049426

Start: 4454240

End: 4454452

Strand: Reverse

Name: 78049426

Synonym: XCV3870

Alternate gene names: NA

Gene position: 4454452-4454240 (Counterclockwise)

Preceding gene: 78049431

Following gene: 78049423

Centisome position: 86.02

GC content: 62.91

Gene sequence:

>213_bases
ATGGACCGCTCCGACATGCAAGTGTCCGATCTGCTGGTCTTGGAGCTGCAAGGGTTCCACGATGCCTATGGCAATGGGCC
CGACTTCTGGGACGCCTACCAGCGCATCATGGGCATCGCGGCGCAGGCCGGCGGCAACATGGTCGCCTTGGCCAACGAAA
TGGCCTCACTGGCACAAGGGCTTGGCGCGACCAAGCGCGCGCAACTGCTGTAA

Upstream 100 bases:

>100_bases
ACCAATTCAGGTCCAGGCATCCGGCCATCCGGCTGACTCGATTTTGTAAGGTGAACGGGTATAAGCTGCGGGCCGGGGAA
TCCCCCATCGAGGTAACACA

Downstream 100 bases:

>100_bases
CTGCCCCCATGTCCGTGCGGGCGGCGACGCCTGCGCGCGGTGCCTGATGTGTTGAGCACTGAACCCGCGTGCGCAGACTG
CCCAAGCAGCTTCTGCAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MDRSDMQVSDLLVLELQGFHDAYGNGPDFWDAYQRIMGIAAQAGGNMVALANEMASLAQGLGATKRAQLL

Sequences:

>Translated_70_residues
MDRSDMQVSDLLVLELQGFHDAYGNGPDFWDAYQRIMGIAAQAGGNMVALANEMASLAQGLGATKRAQLL
>Mature_70_residues
MDRSDMQVSDLLVLELQGFHDAYGNGPDFWDAYQRIMGIAAQAGGNMVALANEMASLAQGLGATKRAQLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7515; Mature: 7515

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRSDMQVSDLLVLELQGFHDAYGNGPDFWDAYQRIMGIAAQAGGNMVALANEMASLAQG
CCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHC
LGATKRAQLL
CCCCCCCCCC
>Mature Secondary Structure
MDRSDMQVSDLLVLELQGFHDAYGNGPDFWDAYQRIMGIAAQAGGNMVALANEMASLAQG
CCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHC
LGATKRAQLL
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA