| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049184
Identifier: 78049184
GI number: 78049184
Start: 4174112
End: 4174813
Strand: Reverse
Name: 78049184
Synonym: XCV3628
Alternate gene names: NA
Gene position: 4174813-4174112 (Counterclockwise)
Preceding gene: 78049189
Following gene: 78049181
Centisome position: 80.62
GC content: 61.11
Gene sequence:
>702_bases ATGGATTTCCCCGGTAACACGAAAACGTCAGCCGCCAACCTAGTCGTCGGCGGCGTGCTTGCCAAGTGCTGGAGGTCGAG AGCGGCGGGCTCATCACATGCACCCGTGCATGCTATGCCGAATTCGTCAGGGGATGTGCCGATGATTGCCAAAACAGAGC GCAACAAGCAGGCCGATGTGGTGTTGGCTTTCTGGGAGCTTGCCGGCGCGGCGCGCTGGTTCACGCACAACGACGCCTTC GATGCCAATTTTCGCCAACACTTCAGCGAGCAGCATTTTGCCGCCGCACGGGGTGAGTACGCGCAGTGGATGGCACGCGC CGAAGATGCACTGGCCTTGCTGATCCTGCTGGATCAATTTCCACGCAATGCGTTTCGCGGCAGTGCGCATGCCTATGCCA CCGATGGCCTGGCACTGCGGTACGCCAAACAGGCGCTCGCCAGCGGCTTCGATCAACAGGTGTCGGCGCAACTGCGTCTG TTTTTCTATCTGCCCTTCGAGCATGCCGAACACGCCGATGAGCAGGCGCGCGCGGTGCAGCTGATCACTGCACTGGGCGA TGCACAGACCACCCACTGGGCGCTGGAGCATCAGCGCATCATTGAGCGCTTTGGCCGGTTCCCGCACCGCAATGCGGTGC TGGGACGTGAGACCACGGCAGAAGAGCAGCAGTTTCTGGATGAGGGTGGATTTGCCGGTTGA
Upstream 100 bases:
>100_bases GCTGGGGTAGGGATCTTGCACGAAGCGCGATGCGGCCGATGCCGCAGACGCAGGCCCGCACAGCACCGCCGCGCCCAGCG CGGCGAACAGGATGGAACGC
Downstream 100 bases:
>100_bases AGACCTGCATCGGCGATCTGCATGTCGATGATCGAGGTCTGCCGTGCAGCGTGGGTAACGACGCTGCTGCAGCCGGGCAC AGGTGGGCATCGCAACGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MDFPGNTKTSAANLVVGGVLAKCWRSRAAGSSHAPVHAMPNSSGDVPMIAKTERNKQADVVLAFWELAGAARWFTHNDAF DANFRQHFSEQHFAAARGEYAQWMARAEDALALLILLDQFPRNAFRGSAHAYATDGLALRYAKQALASGFDQQVSAQLRL FFYLPFEHAEHADEQARAVQLITALGDAQTTHWALEHQRIIERFGRFPHRNAVLGRETTAEEQQFLDEGGFAG
Sequences:
>Translated_233_residues MDFPGNTKTSAANLVVGGVLAKCWRSRAAGSSHAPVHAMPNSSGDVPMIAKTERNKQADVVLAFWELAGAARWFTHNDAF DANFRQHFSEQHFAAARGEYAQWMARAEDALALLILLDQFPRNAFRGSAHAYATDGLALRYAKQALASGFDQQVSAQLRL FFYLPFEHAEHADEQARAVQLITALGDAQTTHWALEHQRIIERFGRFPHRNAVLGRETTAEEQQFLDEGGFAG >Mature_233_residues MDFPGNTKTSAANLVVGGVLAKCWRSRAAGSSHAPVHAMPNSSGDVPMIAKTERNKQADVVLAFWELAGAARWFTHNDAF DANFRQHFSEQHFAAARGEYAQWMARAEDALALLILLDQFPRNAFRGSAHAYATDGLALRYAKQALASGFDQQVSAQLRL FFYLPFEHAEHADEQARAVQLITALGDAQTTHWALEHQRIIERFGRFPHRNAVLGRETTAEEQQFLDEGGFAG
Specific function: Unknown
COG id: COG3803
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25840; Mature: 25840
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFPGNTKTSAANLVVGGVLAKCWRSRAAGSSHAPVHAMPNSSGDVPMIAKTERNKQADV CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEECCCCCCHHH VLAFWELAGAARWFTHNDAFDANFRQHFSEQHFAAARGEYAQWMARAEDALALLILLDQF HHHHHHHHCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PRNAFRGSAHAYATDGLALRYAKQALASGFDQQVSAQLRLFFYLPFEHAEHADEQARAVQ CHHHHCCCCCEECCCCHHHHHHHHHHHCCCHHHHHHEEEEEEEECCHHHHHHHHHHHHHH LITALGDAQTTHWALEHQRIIERFGRFPHRNAVLGRETTAEEQQFLDEGGFAG HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MDFPGNTKTSAANLVVGGVLAKCWRSRAAGSSHAPVHAMPNSSGDVPMIAKTERNKQADV CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEECCCCCCHHH VLAFWELAGAARWFTHNDAFDANFRQHFSEQHFAAARGEYAQWMARAEDALALLILLDQF HHHHHHHHCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PRNAFRGSAHAYATDGLALRYAKQALASGFDQQVSAQLRLFFYLPFEHAEHADEQARAVQ CHHHHCCCCCEECCCCHHHHHHHHHHHCCCHHHHHHEEEEEEEECCHHHHHHHHHHHHHH LITALGDAQTTHWALEHQRIIERFGRFPHRNAVLGRETTAEEQQFLDEGGFAG HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA