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The map label for this gene is ygfB [C]

Identifier: 78049079

GI number: 78049079

Start: 4036476

End: 4037018

Strand: Reverse

Name: ygfB [C]

Synonym: XCV3523

Alternate gene names: 78049079

Gene position: 4037018-4036476 (Counterclockwise)

Preceding gene: 78049087

Following gene: 78049078

Centisome position: 77.96

GC content: 68.14

Gene sequence:

>543_bases
ATGGATCTGCCCGACGTAACCGCTGTGCAACACGAAAGCCGTCAGCTCGCGCTGGCGTCCTCTGCGGCGGAGTTGCATGG
TGGACTGTGCGGGTGGCTCTCCGGCGGCGGTGCCGACAGCGCCGACTGGCTGGCGCGCATTCTGGCCGACAGCGGTCAGG
TGGCGCCCCAGCAGGGTGGGGCGCTGGATCAGCTGCGGCAGGCCACCGTGGCGCAACTGGAAGACCGCGATTTCGCCTTC
GAGTTGCTGCTGGTCGAAGACGGCGCCCCGTTGCCGGCGCGCACCGATGCGTTGTTCGACTGGTGCCGCGCCTTTCTGGG
CGGCTTCGGCCTGGCTGCGCAGCAGCGTCCGGCACTGAGCGAAGAAGGCGAGGAAGCGCTGCAGGATCTGGCGCGTCTGG
CGCAGGCCTCCAGCGAGGACTTCGACGCGGCCGACGAGGACGACACCGCATTGGCCGAGATCGAAGAATTCGTACGCGTG
GCGGTGCTGTTGCTGCATGGCGACTGCGTGATGGGGCCGCGCTTTCGCCAGCGTCTGAACTGA

Upstream 100 bases:

>100_bases
AACGCGCAGGTCGCGGCCCACGCAGGCTGCCTTGGTACACTGGGAAGTCATATCGCCGGCCGTGCGCCGGCACCTTTCGC
TCTTCAGCCTGGATGACCCG

Downstream 100 bases:

>100_bases
TTGCCGGCATGAAGAAGCTCACCGGGATTGGCGCGGCCGAGTACGCGCGCCGGCGCAAGCAGCTGATGCAGATGGCGGGC
GAGCAGGCGATTTTGATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MDLPDVTAVQHESRQLALASSAAELHGGLCGWLSGGGADSADWLARILADSGQVAPQQGGALDQLRQATVAQLEDRDFAF
ELLLVEDGAPLPARTDALFDWCRAFLGGFGLAAQQRPALSEEGEEALQDLARLAQASSEDFDAADEDDTALAEIEEFVRV
AVLLLHGDCVMGPRFRQRLN

Sequences:

>Translated_180_residues
MDLPDVTAVQHESRQLALASSAAELHGGLCGWLSGGGADSADWLARILADSGQVAPQQGGALDQLRQATVAQLEDRDFAF
ELLLVEDGAPLPARTDALFDWCRAFLGGFGLAAQQRPALSEEGEEALQDLARLAQASSEDFDAADEDDTALAEIEEFVRV
AVLLLHGDCVMGPRFRQRLN
>Mature_180_residues
MDLPDVTAVQHESRQLALASSAAELHGGLCGWLSGGGADSADWLARILADSGQVAPQQGGALDQLRQATVAQLEDRDFAF
ELLLVEDGAPLPARTDALFDWCRAFLGGFGLAAQQRPALSEEGEEALQDLARLAQASSEDFDAADEDDTALAEIEEFVRV
AVLLLHGDCVMGPRFRQRLN

Specific function: Unknown

COG id: COG3079

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0149 family [H]

Homologues:

Organism=Escherichia coli, GI87082182, Length=169, Percent_Identity=31.9526627218935, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011978 [H]

Pfam domain/function: PF03695 UPF0149 [H]

EC number: NA

Molecular weight: Translated: 19261; Mature: 19261

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLPDVTAVQHESRQLALASSAAELHGGLCGWLSGGGADSADWLARILADSGQVAPQQGG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC
ALDQLRQATVAQLEDRDFAFELLLVEDGAPLPARTDALFDWCRAFLGGFGLAAQQRPALS
HHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
EEGEEALQDLARLAQASSEDFDAADEDDTALAEIEEFVRVAVLLLHGDCVMGPRFRQRLN
CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC
>Mature Secondary Structure
MDLPDVTAVQHESRQLALASSAAELHGGLCGWLSGGGADSADWLARILADSGQVAPQQGG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC
ALDQLRQATVAQLEDRDFAFELLLVEDGAPLPARTDALFDWCRAFLGGFGLAAQQRPALS
HHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
EEGEEALQDLARLAQASSEDFDAADEDDTALAEIEEFVRVAVLLLHGDCVMGPRFRQRLN
CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA