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The map label for this gene is yicC [H]

Identifier: 78049069

GI number: 78049069

Start: 4026012

End: 4026872

Strand: Reverse

Name: yicC [H]

Synonym: XCV3513

Alternate gene names: 78049069

Gene position: 4026872-4026012 (Counterclockwise)

Preceding gene: 78049078

Following gene: 78049068

Centisome position: 77.76

GC content: 66.55

Gene sequence:

>861_bases
ATGATCCGAAGCATGACGGCGTTCGCTGGCAGCGAACGCATCACACCCTGGGGCACGCTCGGTTGCGAGCTGCGCTCGGT
CAACCACCGCTTTCTGGAAGTGGGTGTGCGTCTGCCCGAGGAATTGCGTGCGCTGGAACCGTTGCTACGCGAGCGGGTGG
CGGCGAAAAACAGCCGTGGCAAGCTGGATCTGACGCTGCGCCTGCGCGCGCCCGACAACGCGCAGACGCTGGCGGTCAAC
GAATCGCTGCTACAGCAATTGGGTGCGCTGGCCACGCGGCTGGATGGTCTGTTCCCCAAATTGCAGGTCGGCTTCACCGA
CCTGCTGCAGCTGCCCGGCGTCCTGCAGGTGCAGGACGTGGACGCCCCCGCGTTGCAGGCACAGGCGCTGGCGTTGCTGG
AGGAGGTGGTGGGTAGCTTCGTGATCGCGCGCGAGCGCGAGGGCGCCAAGCTGGCCGAGGCGATCAGCGAGCGGGTAGAT
GCCATCGAACGCATCGCCGCCGAGGTGCGCGTCCTGATTCCGGTGATTCGCGAAGGTCAGCGCGCCAAGCTGGCCGCGCG
CCTGGCCGACCTGCCGCATCCGGTCGACCCGGGCCGTGCCGAGCAGGAGCTGGTGCTGTGGCTGCAGAAGCTGGATGTGG
ACGAGGAGCTGGACCGCCTGTCCAGCCACATCGCCGAGATCCGTCGCGTGCTCAGGCAGCGCGAACCGGTCGGTCGCCGC
CTGGACTTCCTGCTGCAGGAATTCAACCGCGAAGCCAATACGCTGGGCTCCAAGTCGGTGGACAGCCGCACCTCCAATGC
CGCCGTGGATCTGAAGGTGTTGATCGACCAGATCCGCGAGCAGGTGCAGAACATCGAGTAG

Upstream 100 bases:

>100_bases
CCGGAAGTCGGGAGGTGGGTCTGGCGCCACTGCGCAGCGTGCAGGCAGCCGGCGAGGGCGGCTAGGGTACCATTCGCGCT
TTGACGGCACGGGATTGACG

Downstream 100 bases:

>100_bases
CCGGGATTGGTGATTGGGGATTCGGGATTGGTCGACGGCAACCTCGCGTTTCAGCGGGCTGCGGCCAATCCCGGTAGCAT
GTCGACCCCGGTGGCACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MIRSMTAFAGSERITPWGTLGCELRSVNHRFLEVGVRLPEELRALEPLLRERVAAKNSRGKLDLTLRLRAPDNAQTLAVN
ESLLQQLGALATRLDGLFPKLQVGFTDLLQLPGVLQVQDVDAPALQAQALALLEEVVGSFVIAREREGAKLAEAISERVD
AIERIAAEVRVLIPVIREGQRAKLAARLADLPHPVDPGRAEQELVLWLQKLDVDEELDRLSSHIAEIRRVLRQREPVGRR
LDFLLQEFNREANTLGSKSVDSRTSNAAVDLKVLIDQIREQVQNIE

Sequences:

>Translated_286_residues
MIRSMTAFAGSERITPWGTLGCELRSVNHRFLEVGVRLPEELRALEPLLRERVAAKNSRGKLDLTLRLRAPDNAQTLAVN
ESLLQQLGALATRLDGLFPKLQVGFTDLLQLPGVLQVQDVDAPALQAQALALLEEVVGSFVIAREREGAKLAEAISERVD
AIERIAAEVRVLIPVIREGQRAKLAARLADLPHPVDPGRAEQELVLWLQKLDVDEELDRLSSHIAEIRRVLRQREPVGRR
LDFLLQEFNREANTLGSKSVDSRTSNAAVDLKVLIDQIREQVQNIE
>Mature_286_residues
MIRSMTAFAGSERITPWGTLGCELRSVNHRFLEVGVRLPEELRALEPLLRERVAAKNSRGKLDLTLRLRAPDNAQTLAVN
ESLLQQLGALATRLDGLFPKLQVGFTDLLQLPGVLQVQDVDAPALQAQALALLEEVVGSFVIAREREGAKLAEAISERVD
AIERIAAEVRVLIPVIREGQRAKLAARLADLPHPVDPGRAEQELVLWLQKLDVDEELDRLSSHIAEIRRVLRQREPVGRR
LDFLLQEFNREANTLGSKSVDSRTSNAAVDLKVLIDQIREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=287, Percent_Identity=45.2961672473868, Blast_Score=236, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 31905; Mature: 31905

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSMTAFAGSERITPWGTLGCELRSVNHRFLEVGVRLPEELRALEPLLRERVAAKNSRG
CCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
KLDLTLRLRAPDNAQTLAVNESLLQQLGALATRLDGLFPKLQVGFTDLLQLPGVLQVQDV
CEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHCCCCEEEECC
DAPALQAQALALLEEVVGSFVIAREREGAKLAEAISERVDAIERIAAEVRVLIPVIREGQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
RAKLAARLADLPHPVDPGRAEQELVLWLQKLDVDEELDRLSSHIAEIRRVLRQREPVGRR
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
LDFLLQEFNREANTLGSKSVDSRTSNAAVDLKVLIDQIREQVQNIE
HHHHHHHHCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRSMTAFAGSERITPWGTLGCELRSVNHRFLEVGVRLPEELRALEPLLRERVAAKNSRG
CCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
KLDLTLRLRAPDNAQTLAVNESLLQQLGALATRLDGLFPKLQVGFTDLLQLPGVLQVQDV
CEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHCCCCEEEECC
DAPALQAQALALLEEVVGSFVIAREREGAKLAEAISERVDAIERIAAEVRVLIPVIREGQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
RAKLAARLADLPHPVDPGRAEQELVLWLQKLDVDEELDRLSSHIAEIRRVLRQREPVGRR
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
LDFLLQEFNREANTLGSKSVDSRTSNAAVDLKVLIDQIREQVQNIE
HHHHHHHHCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2664418; 7686882; 9278503; 1925027 [H]