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The map label for this gene is 78048844

Identifier: 78048844

GI number: 78048844

Start: 3754456

End: 3754749

Strand: Reverse

Name: 78048844

Synonym: XCV3288

Alternate gene names: NA

Gene position: 3754749-3754456 (Counterclockwise)

Preceding gene: 78048848

Following gene: 78048842

Centisome position: 72.51

GC content: 66.33

Gene sequence:

>294_bases
ATGCCCATCTACGGTTTCCAGTGCACTACCTGCGGCCACGCATTCGACCGCCTGCAGAAAATGGCCGACCCCGATCCGCA
AACCTGCCCGGCCTGCGCCGCTGCCACGATCAAGCGCCAGGTCACCGCGCCGTCGTTCCGCCTGTCCGGCAGCGGCTGGT
ACGAGACCGACTTCAAATCGGCCGGCGAGAAAAAGAAGAACCTCACCGAAAGCAGCAGCGCCGGCGGCGATGCCAAACCG
GCGGCAACCGCGGAGAGCAAGCCGGCCGCCAAGCCCGCGTCCGATCCGGCATAA

Upstream 100 bases:

>100_bases
ACCGGCTGCCTGCTGCCCGTCGCAGGCGGCGCGCTGCCCTTGCCTGCCCGCATGCGTCTAGAATTTGCGCCCCTTGCAAC
GTCTTCAGCTGATCCCTGCC

Downstream 100 bases:

>100_bases
GTGGCCGCGGCGTGCAGGTTGCGCCGCACAGCGCGGTTGCGCGTTGCAACGACTCCACGTCGAGCACCGTGCTGCCGGCT
GTGTCGCGGAGGATTGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: FmdB Family Regulatory Protein; Regulatory Protein; Type I Antifreeze Protein; Regulatory Protein FmdB Family Domain-Containing; FmdB Transcriptional Regulator

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MPIYGFQCTTCGHAFDRLQKMADPDPQTCPACAAATIKRQVTAPSFRLSGSGWYETDFKSAGEKKKNLTESSSAGGDAKP
AATAESKPAAKPASDPA

Sequences:

>Translated_97_residues
MPIYGFQCTTCGHAFDRLQKMADPDPQTCPACAAATIKRQVTAPSFRLSGSGWYETDFKSAGEKKKNLTESSSAGGDAKP
AATAESKPAAKPASDPA
>Mature_96_residues
PIYGFQCTTCGHAFDRLQKMADPDPQTCPACAAATIKRQVTAPSFRLSGSGWYETDFKSAGEKKKNLTESSSAGGDAKPA
ATAESKPAAKPASDPA

Specific function: Unknown

COG id: COG2331

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10126; Mature: 9995

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIYGFQCTTCGHAFDRLQKMADPDPQTCPACAAATIKRQVTAPSFRLSGSGWYETDFKS
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHH
AGEKKKNLTESSSAGGDAKPAATAESKPAAKPASDPA
CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PIYGFQCTTCGHAFDRLQKMADPDPQTCPACAAATIKRQVTAPSFRLSGSGWYETDFKS
CCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHH
AGEKKKNLTESSSAGGDAKPAATAESKPAAKPASDPA
CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA